Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02309

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,453,519	-				-0.1
2,453,534	-				+0.2
2,453,545	-				-0.5
2,453,596	+		CCNA_02308	0.14	-1.6
2,453,596	+		CCNA_02308	0.14	-0.3
2,453,648	-		CCNA_02308	0.20	-0.3
2,453,651	+		CCNA_02308	0.20	-1.4
2,453,659	-		CCNA_02308	0.21	-1.0
2,453,703	-		CCNA_02308	0.26	-2.2
2,453,714	-		CCNA_02308	0.28	+0.0
2,453,716	+		CCNA_02308	0.28	+0.0
2,453,724	-		CCNA_02308	0.29	+1.1
2,453,743	+		CCNA_02308	0.31	+2.3
2,453,771	+		CCNA_02308	0.34	+0.1
2,453,809	+		CCNA_02308	0.39	-1.8
2,453,817	-		CCNA_02308	0.40	-0.9
2,453,834	-		CCNA_02308	0.42	+0.2
2,453,854	+		CCNA_02308	0.44	+0.9
2,453,861	+		CCNA_02308	0.45	+1.5
2,453,869	-		CCNA_02308	0.46	-0.8
2,453,879	-		CCNA_02308	0.47	-2.0
2,453,892	-		CCNA_02308	0.49	-0.9
2,453,964	-		CCNA_02308	0.57	+0.9
2,453,964	-		CCNA_02308	0.57	+1.2
2,453,968	+		CCNA_02308	0.57	-0.5
2,453,968	+		CCNA_02308	0.57	-0.5
2,454,003	-		CCNA_02308	0.62	-0.8
2,454,016	+		CCNA_02308	0.63	-1.0
2,454,118	+		CCNA_02308	0.75	-1.8
2,454,119	-		CCNA_02308	0.75	+0.7
2,454,148	-		CCNA_02308	0.78	-0.1
2,454,161	-		CCNA_02308	0.80	-2.2
2,454,166	+		CCNA_02308	0.81	+2.5
2,454,173	+		CCNA_02308	0.81	+0.5
2,454,181	-		CCNA_02308	0.82	-0.5
2,454,181	-		CCNA_02308	0.82	+1.3
2,454,222	+		CCNA_02308	0.87	-0.7
2,454,230	-		CCNA_02308	0.88	-2.1
2,454,230	-		CCNA_02308	0.88	-0.4
2,454,230	-		CCNA_02308	0.88	+0.7
2,454,230	-		CCNA_02308	0.88	-0.4
2,454,239	+		CCNA_02308	0.89	+3.0
2,454,254	+				+0.8
2,454,299	+				+0.6
2,454,339	+				-0.9
2,454,347	-				-0.5
2,454,352	-				-0.8
2,454,392	+				+2.5
2,454,499	-				-0.2
2,454,696	+		CCNA_02309	0.53	+1.0
2,454,766	-		CCNA_02309	0.74	+0.4
2,454,800	+		CCNA_02309	0.84	+1.4
2,454,802	+		CCNA_02309	0.84	+2.2
2,454,809	-		CCNA_02309	0.86	-0.4
2,454,813	+		CCNA_02309	0.88	+1.4
2,454,848	+				+1.6
2,454,848	+				+1.6
2,454,848	+				+1.7
2,454,848	+				+1.4
2,454,850	+				+0.8
2,454,856	-				-2.1
2,454,856	-				-0.8
2,454,856	-				-1.1
2,454,870	+				+1.4
2,454,870	+				+1.3
2,454,878	-				-1.5
2,454,878	-				-0.4
2,454,878	-				-0.1
2,454,982	+				-0.2
2,454,990	-				+0.2
2,455,039	+				+0.8
2,455,050	+				-2.1
2,455,077	+				-1.1
2,455,085	-				-0.5
2,455,124	+				-2.4
2,455,126	-				-0.3
2,455,150	-				+0.7
2,455,176	+				+1.3
2,455,181	+				-1.5
2,455,189	-				+1.1
2,455,189	-				-0.2
2,455,189	-				-1.5
2,455,191	+				+3.5
2,455,217	+		CCNA_02310	0.11	+0.5
2,455,217	+		CCNA_02310	0.11	+0.8
2,455,223	+		CCNA_02310	0.11	+0.4
2,455,224	+		CCNA_02310	0.12	-1.2
2,455,231	-		CCNA_02310	0.12	+0.4
2,455,232	-		CCNA_02310	0.12	-2.0
2,455,295	+		CCNA_02310	0.15	-1.3
2,455,377	+		CCNA_02310	0.20	-0.4
2,455,385	-		CCNA_02310	0.20	-1.1
2,455,392	+		CCNA_02310	0.20	-0.6
2,455,400	-		CCNA_02310	0.21	+1.3
2,455,405	+		CCNA_02310	0.21	+0.2
2,455,413	+		CCNA_02310	0.22	+0.7
2,455,413	-		CCNA_02310	0.22	+1.5
2,455,438	-		CCNA_02310	0.23	-0.4
2,455,449	-		CCNA_02310	0.23	-0.3
2,455,454	+		CCNA_02310	0.24	-1.1
2,455,476	+		CCNA_02310	0.25	+0.2
2,455,501	+		CCNA_02310	0.26	-3.4
2,455,501	+		CCNA_02310	0.26	+0.5
2,455,537	-		CCNA_02310	0.28	+1.5
2,455,537	-		CCNA_02310	0.28	-0.3
2,455,537	-		CCNA_02310	0.28	-0.8
2,455,569	+		CCNA_02310	0.30	+0.8
2,455,579	+		CCNA_02310	0.30	-0.1
2,455,581	-		CCNA_02310	0.31	-0.1
2,455,587	-		CCNA_02310	0.31	+0.6
2,455,623	+		CCNA_02310	0.33	-0.1
2,455,623	+		CCNA_02310	0.33	-0.6
2,455,642	-		CCNA_02310	0.34	+0.3
2,455,651	+		CCNA_02310	0.34	+0.5
2,455,701	+		CCNA_02310	0.37	-1.3
2,455,709	-		CCNA_02310	0.37	+2.1
2,455,778	+		CCNA_02310	0.41	+0.9
2,455,796	+		CCNA_02310	0.42	+0.1
2,455,796	+		CCNA_02310	0.42	+0.1
2,455,796	+		CCNA_02310	0.42	-0.5
2,455,796	+		CCNA_02310	0.42	-0.4
2,455,796	+		CCNA_02310	0.42	-0.8
2,455,796	+		CCNA_02310	0.42	+0.0
2,455,796	+		CCNA_02310	0.42	+0.0
2,455,796	+		CCNA_02310	0.42	-0.9
2,455,804	-		CCNA_02310	0.42	+0.7
2,455,804	-		CCNA_02310	0.42	-0.1
2,455,850	+		CCNA_02310	0.45	+0.5