Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02281

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,430,299	-				+0.4
2,430,869	-				-0.9
2,430,869	-				+1.7
2,430,935	+				-0.7
2,430,977	-				+1.0
2,431,041	+				-0.6
2,431,053	+				+0.5
2,431,063	-				-0.6
2,431,123	+				-0.6
2,431,187	-		CCNA_02281	0.13	-0.1
2,431,297	+		CCNA_02281	0.19	-0.5
2,431,297	+		CCNA_02281	0.19	-0.8
2,431,304	+		CCNA_02281	0.19	-0.6
2,431,310	-		CCNA_02281	0.20	-1.8
2,431,320	+		CCNA_02281	0.20	-2.2
2,431,320	+		CCNA_02281	0.20	+1.1
2,431,328	-		CCNA_02281	0.21	+1.4
2,431,388	+		CCNA_02281	0.24	+0.7
2,431,417	-		CCNA_02281	0.26	+1.0
2,431,430	-		CCNA_02281	0.26	+0.5
2,431,480	-		CCNA_02281	0.29	-1.0
2,431,495	+		CCNA_02281	0.30	-1.0
2,431,495	+		CCNA_02281	0.30	+0.7
2,431,503	-		CCNA_02281	0.31	-0.1
2,431,513	-		CCNA_02281	0.31	-0.2
2,431,546	+		CCNA_02281	0.33	+0.1
2,431,552	+		CCNA_02281	0.33	-0.2
2,431,554	-		CCNA_02281	0.33	-1.3
2,431,597	+		CCNA_02281	0.36	+0.0
2,431,597	+		CCNA_02281	0.36	-1.7
2,431,597	-		CCNA_02281	0.36	+0.4
2,431,634	-		CCNA_02281	0.38	+1.3
2,431,634	-		CCNA_02281	0.38	-1.1
2,431,648	+		CCNA_02281	0.39	+0.3
2,431,657	-		CCNA_02281	0.39	-0.9
2,431,657	-		CCNA_02281	0.39	-1.6
2,431,699	-		CCNA_02281	0.42	+0.6
2,431,771	+		CCNA_02281	0.46	+0.8
2,431,771	+		CCNA_02281	0.46	-0.1
2,431,772	+		CCNA_02281	0.46	-0.4
2,431,779	-		CCNA_02281	0.46	+2.2
2,431,830	+		CCNA_02281	0.49	-0.4
2,431,839	-		CCNA_02281	0.49	-0.8
2,431,850	+		CCNA_02281	0.50	+0.9
2,431,872	-		CCNA_02281	0.51	+0.2
2,431,901	+		CCNA_02281	0.53	-1.3
2,431,921	+		CCNA_02281	0.54	+1.0
2,431,942	-		CCNA_02281	0.55	-1.3
2,431,960	+		CCNA_02281	0.56	+0.2
2,431,960	+		CCNA_02281	0.56	+0.8
2,431,991	+		CCNA_02281	0.58	-2.1
2,432,043	+		CCNA_02281	0.61	+2.0
2,432,056	+		CCNA_02281	0.62	-0.9
2,432,081	+		CCNA_02281	0.63	-1.7
2,432,087	+		CCNA_02281	0.63	-1.2
2,432,087	+		CCNA_02281	0.63	-0.4
2,432,095	-		CCNA_02281	0.64	+0.3
2,432,095	-		CCNA_02281	0.64	+0.0
2,432,101	+		CCNA_02281	0.64	-0.2
2,432,109	+		CCNA_02281	0.65	-0.4
2,432,144	+		CCNA_02281	0.66	-1.0
2,432,144	+		CCNA_02281	0.66	+0.1
2,432,165	-		CCNA_02281	0.68	-0.7
2,432,166	-		CCNA_02281	0.68	-1.7
2,432,171	+		CCNA_02281	0.68	-1.6
2,432,174	+		CCNA_02281	0.68	-1.1
2,432,227	+		CCNA_02281	0.71	+0.3
2,432,227	-		CCNA_02281	0.71	-0.6
2,432,331	-		CCNA_02281	0.77	+1.0
2,432,387	+		CCNA_02281	0.80	+0.7
2,432,398	+		CCNA_02281	0.81	-1.2
2,432,430	+		CCNA_02281	0.83	-1.2
2,432,438	-		CCNA_02281	0.83	-1.0
2,432,438	-		CCNA_02281	0.83	+0.6
2,432,441	+		CCNA_02281	0.83	+0.3
2,432,492	-		CCNA_02281	0.86	+3.9
2,432,499	-		CCNA_02281	0.86	-0.6
2,432,571	+				-0.8
2,432,575	-				-0.7
2,432,579	-				+0.3
2,432,614	+				-1.2
2,432,621	+				+0.3
2,432,622	-				+1.0
2,432,635	+				-0.3
2,432,635	+				-0.4
2,432,635	+				+0.4
2,432,635	+				+0.3
2,432,635	+				-0.2
2,432,635	+				+0.5
2,432,635	+				-2.0
2,432,635	+				-0.8
2,432,643	-				-1.4
2,432,643	-				-0.8
2,432,643	-				-0.6
2,432,643	-				+2.0
2,432,643	-				+0.6
2,432,650	-				-1.4
2,432,656	+				+1.6
2,432,721	-				-1.1
2,432,721	-				+0.1
2,432,723	-				-1.1
2,432,760	+				-0.1
2,432,760	+				-0.4
2,432,768	-				+0.9
2,432,768	-				-0.2
2,432,775	+				-0.4
2,432,783	-				-0.3
2,432,806	+				-2.2
2,432,850	+				-0.0
2,432,855	+				+2.6
2,432,896	-				-0.7
2,432,934	+		CCNA_02282	0.16	-0.1
2,432,934	+		CCNA_02282	0.16	-1.1
2,432,966	+		CCNA_02282	0.23	-0.4
2,433,007	+		CCNA_02282	0.30	+0.1
2,433,062	+		CCNA_02282	0.41	+0.1
2,433,159	-		CCNA_02282	0.60	+0.2
2,433,214	+		CCNA_02282	0.70	-1.7
2,433,254	-		CCNA_02282	0.78	+0.8
2,433,309	-		CCNA_02282	0.88	+2.4
2,433,329	+				-1.9
2,433,379	-				-0.2
2,433,504	+		CCNA_02283	0.19	-0.4
2,433,512	+		CCNA_02283	0.20	-0.9
2,433,520	-		CCNA_02283	0.22	+0.1
2,433,520	-		CCNA_02283	0.22	+0.5
2,433,520	-		CCNA_02283	0.22	+0.6
2,433,548	+		CCNA_02283	0.27	+0.4
2,433,565	+		CCNA_02283	0.30	+1.5
2,433,603	-		CCNA_02283	0.37	-1.0
2,433,651	-		CCNA_02283	0.45	+1.5
2,433,651	-		CCNA_02283	0.45	-1.8
2,433,659	-		CCNA_02283	0.46	-0.3
2,433,662	+		CCNA_02283	0.47	+0.6
2,433,699	+		CCNA_02283	0.54	-2.2
2,433,701	-		CCNA_02283	0.54	-0.4
2,433,707	-		CCNA_02283	0.55	-0.5
2,433,727	+		CCNA_02283	0.59	-1.5