Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02163

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,316,417	+		CCNA_02161	0.28	+2.3
2,316,441	-		CCNA_02161	0.32	+0.1
2,316,449	-		CCNA_02161	0.33	-0.4
2,316,451	+		CCNA_02161	0.33	+2.6
2,316,490	+		CCNA_02161	0.39	+2.2
2,316,519	+		CCNA_02161	0.44	+2.8
2,316,553	-		CCNA_02161	0.49	+0.8
2,316,616	-		CCNA_02161	0.58	+1.0
2,316,653	+		CCNA_02161	0.64	+1.3
2,316,711	+		CCNA_02161	0.72	+2.1
2,316,711	+		CCNA_02161	0.72	+1.3
2,316,711	+		CCNA_02161	0.72	+1.7
2,316,719	-		CCNA_02161	0.74	+0.8
2,316,719	-		CCNA_02161	0.74	+2.0
2,316,741	-		CCNA_02161	0.77	+1.0
2,316,744	-		CCNA_02161	0.77	+0.5
2,316,748	+				+2.4
2,316,931	+				-0.8
2,316,944	+				-1.3
2,316,944	+				-0.2
2,316,952	-				-0.7
2,316,977	+				+0.0
2,316,977	+				+2.4
2,316,977	+				+0.6
2,316,992	+				+1.4
2,317,011	-				+0.1
2,317,011	-				-2.9
2,317,021	+				+0.9
2,317,021	+				-0.0
2,317,021	+				+1.7
2,317,021	+				+0.2
2,317,029	-				-1.0
2,317,029	-				-0.0
2,317,040	+				+1.3
2,317,114	+				+0.0
2,317,160	-				-0.4
2,317,160	-				-1.1
2,317,162	-				-0.2
2,317,176	-				+3.9
2,317,178	+				-0.2
2,317,181	-				-0.5
2,317,181	-				-1.5
2,317,181	-				-0.7
2,317,181	-				+0.8
2,317,183	+				+3.5
2,317,196	+				+0.3
2,317,196	+				+0.8
2,317,196	+				-1.4
2,317,196	+				+0.2
2,317,196	+				-0.4
2,317,196	+				+0.3
2,317,196	+				+0.5
2,317,196	+				-0.1
2,317,196	+				+1.6
2,317,196	+				+1.2
2,317,196	+				+0.3
2,317,204	-				-0.1
2,317,204	-				-0.7
2,317,204	-				-1.3
2,317,204	-				-0.1
2,317,204	-				+1.8
2,317,204	-				-1.4
2,317,204	-				-1.3
2,317,365	-		CCNA_02163	0.17	+1.0
2,317,365	-		CCNA_02163	0.17	-1.2
2,317,377	-		CCNA_02163	0.18	-0.2
2,317,382	-		CCNA_02163	0.19	-0.5
2,317,484	+		CCNA_02163	0.31	-1.5
2,317,537	+		CCNA_02163	0.37	-1.8
2,317,559	-		CCNA_02163	0.40	+0.6
2,317,560	-		CCNA_02163	0.40	+0.0
2,317,577	+		CCNA_02163	0.42	+0.6
2,317,583	+		CCNA_02163	0.42	+0.5
2,317,586	-		CCNA_02163	0.43	-0.3
2,317,586	-		CCNA_02163	0.43	+1.7
2,317,617	+		CCNA_02163	0.46	-0.8
2,317,625	-		CCNA_02163	0.47	-2.1
2,317,628	+		CCNA_02163	0.48	-0.8
2,317,636	-		CCNA_02163	0.49	+0.4
2,317,636	-		CCNA_02163	0.49	+1.0
2,317,638	+		CCNA_02163	0.49	-0.7
2,317,655	+		CCNA_02163	0.51	+1.7
2,317,655	+		CCNA_02163	0.51	+2.0
2,317,655	+		CCNA_02163	0.51	+1.4
2,317,690	+		CCNA_02163	0.55	-0.8
2,317,710	+		CCNA_02163	0.57	+0.0
2,317,718	-		CCNA_02163	0.58	-1.2
2,317,746	-		CCNA_02163	0.61	+4.4
2,317,756	-		CCNA_02163	0.62	+0.4
2,317,756	-		CCNA_02163	0.62	+0.9
2,317,756	-		CCNA_02163	0.62	+0.7
2,317,765	-		CCNA_02163	0.64	-0.7
2,317,851	+		CCNA_02163	0.74	+0.7
2,317,857	+		CCNA_02163	0.74	-1.8
2,317,864	+		CCNA_02163	0.75	+0.0
2,317,872	-		CCNA_02163	0.76	+0.0
2,318,011	-				+2.1
2,318,072	-				+2.2
2,318,074	+				+0.9
2,318,249	-		CCNA_02164	0.10	+2.9
2,318,313	+		CCNA_02164	0.16	+0.6
2,318,321	-		CCNA_02164	0.17	+2.2
2,318,580	-		CCNA_02164	0.41	+2.3
2,318,592	+		CCNA_02164	0.42	+1.2
2,318,602	+		CCNA_02164	0.43	-0.8
2,318,615	-		CCNA_02164	0.45	+1.7
2,318,697	-		CCNA_02164	0.52	+0.6
2,318,734	+		CCNA_02164	0.56	+1.5
2,318,869	+		CCNA_02164	0.68	+0.7
2,318,919	-		CCNA_02164	0.73	+0.0
2,319,023	+		CCNA_02164	0.83	+1.2