Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02095

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,243,646	+				+1.5
2,243,646	+				-0.7
2,243,651	+				-0.5
2,243,654	-				-0.7
2,243,659	-				+1.2
2,243,659	-				+0.1
2,243,661	+				-0.9
2,243,669	-				-0.3
2,243,682	+				-1.5
2,243,690	-				-0.4
2,243,690	-				+0.7
2,243,690	-				+1.0
2,243,739	+				-0.7
2,243,739	+				+0.1
2,243,739	+				-1.7
2,243,739	+				-1.0
2,243,739	+				-0.1
2,243,747	-				-1.1
2,243,747	-				-0.8
2,243,780	-				-0.9
2,243,874	+		CCNA_02095	0.11	+1.0
2,243,882	-		CCNA_02095	0.12	+1.7
2,243,900	+		CCNA_02095	0.14	+0.0
2,243,920	+		CCNA_02095	0.15	+0.0
2,243,920	+		CCNA_02095	0.15	-2.2
2,244,032	-		CCNA_02095	0.26	-0.1
2,244,045	-		CCNA_02095	0.28	+0.7
2,244,185	+		CCNA_02095	0.41	-0.8
2,244,185	+		CCNA_02095	0.41	-1.5
2,244,193	-		CCNA_02095	0.42	+0.6
2,244,221	+		CCNA_02095	0.45	-0.0
2,244,229	-		CCNA_02095	0.46	-0.9
2,244,237	-		CCNA_02095	0.46	-1.0
2,244,293	+		CCNA_02095	0.52	+0.3
2,244,293	-		CCNA_02095	0.52	-1.4
2,244,293	-		CCNA_02095	0.52	-1.4
2,244,301	-		CCNA_02095	0.53	-0.5
2,244,383	+		CCNA_02095	0.61	+1.6
2,244,385	-		CCNA_02095	0.61	+0.6
2,244,391	-		CCNA_02095	0.61	-0.9
2,244,391	-		CCNA_02095	0.61	-0.8
2,244,391	-		CCNA_02095	0.61	+1.1
2,244,405	+		CCNA_02095	0.63	-1.4
2,244,405	+		CCNA_02095	0.63	-2.1
2,244,405	+		CCNA_02095	0.63	-1.3
2,244,413	-		CCNA_02095	0.64	-0.9
2,244,417	+		CCNA_02095	0.64	-1.6
2,244,423	+		CCNA_02095	0.65	-1.2
2,244,470	-		CCNA_02095	0.69	-1.1
2,244,510	+		CCNA_02095	0.73	+0.0
2,244,518	-		CCNA_02095	0.74	-0.7
2,244,546	+		CCNA_02095	0.77	+0.5
2,244,589	-		CCNA_02095	0.81	-1.8
2,244,598	+		CCNA_02095	0.82	-0.4
2,244,648	+		CCNA_02095	0.86	+0.7
2,244,656	-		CCNA_02095	0.87	-1.3
2,244,656	-				+4.0
2,244,656	-		CCNA_02095	0.87	-0.9
2,244,656	-		CCNA_02095	0.87	-0.4
2,244,663	+		CCNA_02095	0.88	+0.3
2,244,663	+		CCNA_02095	0.88	-0.3
2,244,671	-		CCNA_02095	0.89	-1.4
2,244,671	-		CCNA_02095	0.89	+1.6
2,244,671	-		CCNA_02095	0.89	+0.1
2,244,671	-		CCNA_02095	0.89	-2.2
2,244,697	+				+0.5
2,244,705	-				-0.6
2,244,748	+				-0.0
2,244,766	+				-0.4
2,244,787	+				+0.2
2,244,847	-				+0.1
2,244,875	+				+0.3
2,244,883	-				+1.1
2,244,937	+		CCNA_02096	0.22	+0.6
2,244,971	+		CCNA_02096	0.31	+1.1
2,244,979	-		CCNA_02096	0.33	+0.1
2,244,986	-		CCNA_02096	0.35	+1.9
2,244,986	-		CCNA_02096	0.35	-0.4
2,244,991	-		CCNA_02096	0.37	+1.4
2,245,000	+		CCNA_02096	0.39	-1.8
2,245,062	+		CCNA_02096	0.56	-1.3
2,245,070	-		CCNA_02096	0.58	+0.9
2,245,080	-		CCNA_02096	0.61	-1.0
2,245,268	-				-1.6
2,245,268	-				-0.4
2,245,346	+				-0.1
2,245,550	+				+2.5