Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02000

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,146,268	-				+5.0
2,146,273	-				+4.7
2,146,273	-				+4.5
2,146,273	-				+4.9
2,146,273	-				+4.6
2,146,427	-		CCNA_02000	0.12	+5.2
2,146,450	-		CCNA_02000	0.15	+4.3
2,147,423	-				-0.3
2,147,428	-				-2.4
2,147,440	+				+0.3
2,147,530	-		CCNA_02001	0.13	-0.3
2,147,532	-		CCNA_02001	0.13	+2.9
2,147,534	+		CCNA_02001	0.13	-0.8
2,147,564	-		CCNA_02001	0.18	+0.8
2,147,599	-		CCNA_02001	0.23	-1.2
2,147,618	+		CCNA_02001	0.26	+1.1
2,147,659	-		CCNA_02001	0.33	-0.2
2,147,731	+		CCNA_02001	0.44	-0.4
2,147,731	+		CCNA_02001	0.44	+0.6
2,147,749	-		CCNA_02001	0.46	-1.7
2,147,750	-		CCNA_02001	0.47	+0.4
2,147,803	-		CCNA_02001	0.55	-0.3
2,147,818	+				+2.3
2,147,826	-		CCNA_02001	0.58	-1.3
2,147,826	-		CCNA_02001	0.58	+1.5
2,147,826	-		CCNA_02001	0.58	+0.5
2,147,826	-		CCNA_02001	0.58	+0.1
2,147,826	-		CCNA_02001	0.58	-0.8
2,147,860	+		CCNA_02001	0.63	-0.4
2,147,865	+		CCNA_02001	0.64	+0.8
2,147,865	+		CCNA_02001	0.64	+0.6
2,147,865	+		CCNA_02001	0.64	-0.3
2,147,865	+		CCNA_02001	0.64	+0.4
2,147,865	+		CCNA_02001	0.64	+1.3
2,147,868	-		CCNA_02001	0.65	+0.3
2,147,873	-		CCNA_02001	0.65	-1.0
2,147,873	-		CCNA_02001	0.65	-1.4
2,147,873	-		CCNA_02001	0.65	-0.2
2,147,912	+		CCNA_02001	0.71	+1.3
2,147,923	+		CCNA_02001	0.73	+0.2
2,147,923	+		CCNA_02001	0.73	-1.2
2,147,924	+		CCNA_02001	0.73	+0.8
2,147,926	-		CCNA_02001	0.74	-1.1
2,147,951	+		CCNA_02001	0.77	+0.4
2,147,957	+		CCNA_02001	0.78	-0.5
2,147,957	+		CCNA_02001	0.78	-0.8
2,147,957	+		CCNA_02001	0.78	-1.2
2,147,979	-		CCNA_02001	0.82	-2.4
2,147,984	-		CCNA_02001	0.82	+0.4
2,148,050	+				-1.2
2,148,067	+				-0.4
2,148,086	-				-1.7
2,148,103	+				-0.4
2,148,112	+				+1.7
2,148,117	+				+0.6
2,148,120	-				+1.3
2,148,120	-				+1.4
2,148,125	-				-1.1
2,148,133	+				+0.3