Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01978

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
2,121,452	+		CCNA_01976	0.70	+0.7
2,121,452	+		CCNA_01976	0.70	+0.8
2,121,524	+		CCNA_01976	0.79	+0.5
2,121,529	+		CCNA_01976	0.80	-0.2
2,121,607	+				+0.5
2,121,615	-				-0.5
2,121,615	-				+0.4
2,121,620	-				-0.3
2,121,620	-				-1.2
2,121,650	+				+0.4
2,121,689	-				+1.1
2,121,786	-				-1.1
2,121,799	+				+0.3
2,121,817	+				+0.4
2,121,833	-				+1.2
2,121,944	+		CCNA_01977	0.28	-0.7
2,121,958	-		CCNA_01977	0.30	+0.8
2,121,958	-		CCNA_01977	0.30	-0.2
2,122,059	+		CCNA_01977	0.47	-0.0
2,122,065	+		CCNA_01977	0.48	+0.6
2,122,073	-		CCNA_01977	0.49	+1.1
2,122,079	+		CCNA_01977	0.50	-0.2
2,122,136	+		CCNA_01977	0.60	+2.7
2,122,195	+		CCNA_01977	0.70	+2.2
2,122,233	-		CCNA_01977	0.76	+0.7
2,122,320	-				-1.0
2,122,345	+				-0.0
2,122,397	+				-1.4
2,122,441	+				+1.0
2,122,441	+				+0.5
2,122,441	+				+0.6
2,122,448	-				-0.1
2,122,449	-				+1.0
2,122,449	-				-1.0
2,122,466	+				-0.3
2,122,498	-				-0.3
2,122,522	+		CCNA_01978	0.12	-2.0
2,122,534	+		CCNA_01978	0.13	-0.1
2,122,580	+		CCNA_01978	0.19	-0.3
2,122,614	+		CCNA_01978	0.23	-0.1
2,122,622	+		CCNA_01978	0.23	-0.3
2,122,622	+		CCNA_01978	0.23	-0.0
2,122,630	-		CCNA_01978	0.24	+1.1
2,122,630	-		CCNA_01978	0.24	-1.2
2,122,630	-		CCNA_01978	0.24	-1.8
2,122,630	-		CCNA_01978	0.24	-0.6
2,122,657	-		CCNA_01978	0.28	+2.0
2,122,659	+		CCNA_01978	0.28	-0.7
2,122,662	-		CCNA_01978	0.28	+0.3
2,122,811	+		CCNA_01978	0.46	-1.2
2,122,889	+		CCNA_01978	0.55	+1.3
2,122,951	+		CCNA_01978	0.62	+0.3
2,123,005	-		CCNA_01978	0.68	-0.4
2,123,042	+		CCNA_01978	0.73	-0.7
2,123,048	+		CCNA_01978	0.73	-0.8
2,123,063	+		CCNA_01978	0.75	+1.3
2,123,142	+		CCNA_01978	0.85	-0.2
2,123,143	+		CCNA_01978	0.85	-2.0
2,123,151	-		CCNA_01978	0.86	+0.7
2,123,169	-		CCNA_01978	0.88	-0.3
2,123,171	+		CCNA_01978	0.88	-0.2
2,123,171	+		CCNA_01978	0.88	+0.6
2,123,178	+		CCNA_01978	0.89	-1.7
2,123,179	-		CCNA_01978	0.89	+1.3
2,123,179	-		CCNA_01978	0.89	-1.0
2,123,179	-		CCNA_01978	0.89	-1.7
2,123,179	-		CCNA_01978	0.89	-2.3
2,123,179	-		CCNA_01978	0.89	+0.8
2,123,186	-		CCNA_01978	0.90	+1.0
2,123,428	+				+3.9
2,123,436	-				-2.0
2,123,583	+				+3.3
2,123,649	+		CCNA_01979	0.29	+4.6
2,123,675	+		CCNA_01979	0.33	+5.1
2,123,873	+		CCNA_01979	0.61	+4.7
2,123,894	+		CCNA_01979	0.64	+4.1
2,124,144	+				+2.7
2,124,183	+				+2.4
2,124,183	+				+2.7
2,124,200	+				-1.1
2,124,208	-				+0.7
2,124,250	+				+2.8
2,124,270	+				+1.1
2,124,270	+				+2.0