Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01786

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,913,087	-				+0.6
1,913,087	-				+0.6
1,913,087	-				-0.4
1,913,087	-				+0.9
1,913,087	-				+2.3
1,913,087	-				-0.6
1,913,087	-				+0.4
1,913,091	+				-0.3
1,913,163	+				+1.5
1,913,174	-				+1.5
1,913,181	-				+0.8
1,913,206	-				+0.8
1,913,222	+				-0.3
1,913,223	-				-0.0
1,913,230	+				+0.7
1,913,235	+				-0.2
1,913,238	-				+0.9
1,913,238	-				+0.4
1,913,240	+				+0.2
1,913,243	-				+1.5
1,913,243	-				-2.1
1,913,248	-				+4.5
1,913,298	+				+0.4
1,913,298	+				+0.2
1,913,298	+				-0.1
1,913,298	+				-1.5
1,913,306	-				-0.8
1,913,306	-				+3.1
1,913,306	-				+0.4
1,913,308	+				-0.2
1,913,308	+				+0.7
1,913,308	+				-1.0
1,913,308	+				+1.6
1,913,316	-				+1.5
1,913,316	-				+1.6
1,913,318	+				+1.5
1,913,318	+				-0.2
1,913,326	-				-1.1
1,913,326	-				+1.3
1,913,341	+				+0.1
1,913,374	+				-0.7
1,913,374	+				+0.3
1,913,374	+				+0.8
1,913,374	+				+0.0
1,913,374	+				+0.6
1,913,382	-				-0.7
1,913,431	-				-0.0
1,913,434	+				+0.4
1,913,453	+				-0.1
1,913,453	+				+0.8
1,913,456	-				-0.8
1,913,458	+				-0.1
1,913,524	+				-0.3
1,913,524	+				+0.1
1,913,526	-				+0.9
1,913,526	-				+0.2
1,913,532	-				-0.4
1,913,536	+				+1.1
1,913,549	+				-1.3
1,913,549	+				+0.1
1,913,549	+				+1.6
1,913,557	-				+1.6
1,913,559	+				+0.4
1,913,597	-				+0.6
1,913,604	-				+2.1
1,913,617	+				-0.3
1,913,625	-				-2.2
1,913,625	-				+3.1
1,913,641	-				+0.7
1,913,651	+				+0.3
1,913,658	-				+2.1
1,913,678	-				+0.4
1,913,678	-				-1.3
1,913,692	+				+0.9
1,913,747	-				-0.4
1,913,751	-				-0.1
1,913,773	+				-0.7
1,913,794	-				-0.4
1,913,797	+				+2.3
1,913,797	+				+0.6
1,913,802	+				+0.8
1,913,805	-				+0.9
1,913,832	-				-0.1
1,913,887	-				-0.5
1,913,894	+				+1.6
1,913,902	-				+0.5
1,913,983	-				+1.4
1,913,988	-				+0.7
1,913,992	+				-0.3
1,914,014	-				+0.3
1,914,014	-				-1.3
1,914,022	-				+0.6
1,914,077	+		CCNA_01786	0.11	+1.3
1,914,120	-		CCNA_01786	0.17	-0.1
1,914,122	+		CCNA_01786	0.17	-0.9
1,914,122	+		CCNA_01786	0.17	-0.3
1,914,130	-		CCNA_01786	0.18	-0.8
1,914,130	-		CCNA_01786	0.18	-1.1
1,914,130	-				+2.3
1,914,130	-		CCNA_01786	0.18	-1.4
1,914,145	-		CCNA_01786	0.20	-0.4
1,914,168	+		CCNA_01786	0.23	+3.0
1,914,191	+		CCNA_01786	0.26	-0.2
1,914,208	-		CCNA_01786	0.29	+0.8
1,914,371	+		CCNA_01786	0.51	-0.6
1,914,379	-		CCNA_01786	0.52	+0.2
1,914,385	+		CCNA_01786	0.52	-0.0
1,914,387	+		CCNA_01786	0.53	+0.5
1,914,392	+		CCNA_01786	0.53	+0.2
1,914,400	-		CCNA_01786	0.55	+0.7
1,914,431	-		CCNA_01786	0.59	-1.5
1,914,481	+		CCNA_01786	0.65	+2.2
1,914,481	+		CCNA_01786	0.65	+1.7
1,914,496	+		CCNA_01786	0.67	+1.3
1,914,534	+		CCNA_01786	0.73	+1.7
1,914,542	-		CCNA_01786	0.74	+1.1
1,914,563	+		CCNA_01786	0.77	+1.0
1,914,568	+		CCNA_01786	0.77	+1.1
1,914,571	-		CCNA_01786	0.78	+0.4
1,914,576	-		CCNA_01786	0.78	+1.1
1,914,576	-		CCNA_01786	0.78	+0.1
1,914,651	+		CCNA_01786	0.88	-1.2
1,914,714	+				+1.5
1,914,714	+				+2.1
1,914,730	+				+0.1
1,914,730	+				-0.6
1,914,730	+				+0.4
1,914,738	+				+0.6
1,914,738	-				-1.2
1,914,748	+				+0.5
1,914,748	+				+0.5
1,914,771	+				+0.1
1,914,827	+				-0.9
1,914,862	-				-1.2
1,914,863	+				+1.5
1,914,865	+				-0.1
1,914,871	-				+0.5
1,914,919	-				+4.6