Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01783

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,910,389	+		CCNA_01782	0.66	+1.0
1,910,402	-		CCNA_01782	0.66	+1.2
1,910,414	-		CCNA_01782	0.67	-0.4
1,910,422	-		CCNA_01782	0.67	-0.0
1,910,460	+		CCNA_01782	0.69	+0.7
1,910,468	-		CCNA_01782	0.69	+3.1
1,910,481	-		CCNA_01782	0.70	+1.8
1,910,512	-		CCNA_01782	0.71	+0.1
1,910,512	-		CCNA_01782	0.71	+0.1
1,910,514	-		CCNA_01782	0.71	-0.2
1,910,514	-		CCNA_01782	0.71	+0.9
1,910,524	-		CCNA_01782	0.72	-0.3
1,910,557	+		CCNA_01782	0.73	-0.8
1,910,557	+		CCNA_01782	0.73	+0.8
1,910,563	-		CCNA_01782	0.73	+0.1
1,910,565	-		CCNA_01782	0.73	+0.1
1,910,565	-		CCNA_01782	0.73	-0.3
1,910,565	-		CCNA_01782	0.73	+1.5
1,910,640	+		CCNA_01782	0.77	+0.9
1,910,701	+		CCNA_01782	0.80	+1.6
1,910,734	+		CCNA_01782	0.81	+1.1
1,910,753	-		CCNA_01782	0.82	-1.0
1,910,766	-		CCNA_01782	0.83	+2.1
1,910,770	-		CCNA_01782	0.83	+0.7
1,910,843	+		CCNA_01782	0.86	+0.6
1,910,852	+		CCNA_01782	0.86	+0.2
1,910,952	+				+0.8
1,910,993	+				+0.1
1,911,001	-				+2.3
1,911,001	-				-0.6
1,911,001	-				+0.5
1,911,005	+				+0.6
1,911,020	+				+0.8
1,911,039	-				+0.8
1,911,067	-				-0.4
1,911,148	+				+1.2
1,911,148	+				-1.4
1,911,156	+				-1.6
1,911,156	-				+0.1
1,911,156	-				+1.8
1,911,206	+				+0.9
1,911,214	-				-0.7
1,911,239	-				+1.6
1,911,298	+				+1.5
1,911,364	-				+1.2
1,911,379	-				+1.0
1,911,380	-				+2.4
1,912,084	+				+0.4
1,912,094	-				+0.6
1,912,152	-				+1.6
1,912,152	-				+2.3
1,912,165	+				-0.3
1,912,165	+				+0.5
1,912,165	+				+0.1
1,912,173	-				-1.2
1,912,173	-				-0.7
1,912,182	+				+0.2
1,912,182	+				-0.2
1,912,182	+				+0.9
1,912,190	-				-0.1
1,912,190	-				-1.6
1,912,190	-				-1.0
1,912,190	-				-0.3
1,912,307	-		CCNA_01784	0.20	+0.7
1,912,311	-		CCNA_01784	0.21	+1.3
1,912,344	-		CCNA_01784	0.30	+0.6
1,912,380	-				+3.1
1,912,380	-		CCNA_01784	0.39	+0.8
1,912,466	+		CCNA_01784	0.61	+2.1
1,912,471	+		CCNA_01784	0.62	+0.8
1,912,472	-		CCNA_01784	0.62	+0.6
1,912,491	-				+0.5
1,912,597	-				+1.5
1,912,638	-		CCNA_01785	0.25	-1.7
1,912,638	-		CCNA_01785	0.25	-0.1
1,912,652	+		CCNA_01785	0.27	+0.1
1,912,733	-		CCNA_01785	0.40	-0.5
1,912,733	-		CCNA_01785	0.40	+0.7
1,912,736	-		CCNA_01785	0.41	+1.6
1,912,741	-		CCNA_01785	0.42	+0.3
1,912,799	+		CCNA_01785	0.51	+0.9
1,912,834	-		CCNA_01785	0.57	+3.4
1,912,838	+		CCNA_01785	0.58	+1.3
1,912,838	+		CCNA_01785	0.58	+0.1
1,912,847	-		CCNA_01785	0.59	+2.3
1,912,856	+		CCNA_01785	0.60	-0.1
1,912,902	-		CCNA_01785	0.68	-0.7
1,912,941	+		CCNA_01785	0.74	+2.3