Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01748

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,875,127	+				+1.8
1,875,127	+				+2.8
1,875,135	-				+1.5
1,875,155	+				+0.3
1,875,155	+				+1.4
1,875,907	+				+3.8
1,875,915	-				-0.6
1,875,967	+				+2.7
1,875,984	-				-0.3
1,876,022	-				+0.3
1,876,024	+				+2.5
1,876,032	-		CCNA_01748	0.10	+0.1
1,876,078	+		CCNA_01748	0.15	+1.4
1,876,092	+		CCNA_01748	0.17	+3.2
1,876,092	+		CCNA_01748	0.17	+4.0
1,876,123	+		CCNA_01748	0.20	+1.5
1,876,138	+		CCNA_01748	0.22	+1.3
1,876,148	+		CCNA_01748	0.23	+2.8
1,876,161	+		CCNA_01748	0.24	+1.7
1,876,280	-		CCNA_01748	0.37	+1.2
1,876,419	+		CCNA_01748	0.52	+1.1
1,876,434	+		CCNA_01748	0.54	+1.2
1,876,442	-		CCNA_01748	0.55	+0.6
1,876,449	+		CCNA_01748	0.55	+1.1
1,876,459	+		CCNA_01748	0.56	+0.9
1,876,467	-		CCNA_01748	0.57	+1.6
1,876,510	-		CCNA_01748	0.62	-0.8
1,876,522	-		CCNA_01748	0.63	+0.0
1,876,522	-		CCNA_01748	0.63	+0.9
1,876,559	+		CCNA_01748	0.67	+1.1
1,876,576	+		CCNA_01748	0.69	+1.4
1,876,576	+		CCNA_01748	0.69	+2.9
1,876,576	+		CCNA_01748	0.69	+1.2
1,876,576	+		CCNA_01748	0.69	+0.5
1,876,576	+		CCNA_01748	0.69	+1.8
1,876,576	+		CCNA_01748	0.69	-0.6
1,876,579	-		CCNA_01748	0.69	+0.1
1,876,581	+		CCNA_01748	0.69	+0.7
1,876,584	-		CCNA_01748	0.70	-0.7
1,876,584	-		CCNA_01748	0.70	-0.6
1,876,584	-		CCNA_01748	0.70	+1.5
1,876,584	-		CCNA_01748	0.70	+0.5
1,876,589	-		CCNA_01748	0.70	+1.3
1,876,596	-		CCNA_01748	0.71	+0.9
1,876,629	-		CCNA_01748	0.75	-0.3
1,876,657	+		CCNA_01748	0.78	+1.1
1,876,657	+		CCNA_01748	0.78	+1.7
1,876,657	+		CCNA_01748	0.78	+1.8
1,876,657	+		CCNA_01748	0.78	-0.2
1,876,657	+		CCNA_01748	0.78	+1.3
1,876,657	+		CCNA_01748	0.78	+0.9
1,876,665	-		CCNA_01748	0.78	+0.9
1,876,665	-		CCNA_01748	0.78	+2.3
1,876,665	-		CCNA_01748	0.78	+0.0
1,876,728	+		CCNA_01748	0.85	+0.9