Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01737

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,863,910	+		CCNA_01735	0.42	+0.4
1,863,910	+		CCNA_01735	0.42	-0.1
1,863,918	-		CCNA_01735	0.44	-0.3
1,863,918	-		CCNA_01735	0.44	-0.7
1,863,918	-		CCNA_01735	0.44	+0.4
1,863,931	+		CCNA_01735	0.47	+1.1
1,863,937	+		CCNA_01735	0.48	+1.5
1,863,950	-				+3.1
1,863,983	+		CCNA_01735	0.57	+0.3
1,863,996	-		CCNA_01735	0.60	+0.1
1,864,082	+		CCNA_01735	0.78	+0.6
1,864,184	+				+1.6
1,864,184	+				-0.7
1,864,184	+				+2.3
1,864,184	+				-1.1
1,864,184	+				-1.0
1,864,184	+				-0.4
1,864,184	+				+1.1
1,864,185	-				-1.5
1,864,192	-				+0.9
1,864,237	+				+1.4
1,864,294	-				+1.7
1,864,396	-		CCNA_01736	0.18	+1.5
1,864,408	-		CCNA_01736	0.20	+1.3
1,864,420	-		CCNA_01736	0.22	+1.9
1,864,431	+		CCNA_01736	0.24	-0.4
1,864,439	-		CCNA_01736	0.25	+0.9
1,864,439	-		CCNA_01736	0.25	+0.1
1,864,451	+		CCNA_01736	0.27	+0.5
1,864,465	-		CCNA_01736	0.30	-0.1
1,864,495	-		CCNA_01736	0.35	+1.6
1,864,560	-		CCNA_01736	0.46	-0.0
1,864,568	-		CCNA_01736	0.47	+2.4
1,864,580	-		CCNA_01736	0.49	+0.8
1,864,580	-		CCNA_01736	0.49	+2.1
1,864,589	+		CCNA_01736	0.50	+0.6
1,864,590	+		CCNA_01736	0.51	+0.8
1,864,597	+		CCNA_01736	0.52	+0.4
1,864,598	-		CCNA_01736	0.52	+0.4
1,864,603	-		CCNA_01736	0.53	+1.6
1,864,679	+		CCNA_01736	0.65	-0.3
1,864,724	+		CCNA_01736	0.73	+1.0
1,864,741	+		CCNA_01736	0.76	+0.5
1,864,751	+		CCNA_01736	0.77	+1.4
1,864,759	-		CCNA_01736	0.79	+1.1
1,864,759	-		CCNA_01736	0.79	-1.5
1,864,761	+		CCNA_01736	0.79	-1.6
1,864,769	-		CCNA_01736	0.80	+0.4
1,864,770	+		CCNA_01736	0.81	-2.2
1,864,785	+		CCNA_01736	0.83	+0.7
1,864,787	+		CCNA_01736	0.83	-1.0
1,864,802	-		CCNA_01736	0.86	+0.9
1,864,803	-		CCNA_01736	0.86	+0.7
1,864,838	-				+1.5
1,864,838	-				-0.4
1,864,858	-				+0.1
1,864,858	-				+3.9
1,864,858	-				+1.8
1,864,859	+				-0.9
1,864,910	+				+1.3
1,866,434	-				-1.1
1,866,496	+				+1.7
1,866,557	+				+1.4
1,866,602	+				+0.8
1,866,602	+				+1.3
1,866,602	+				+3.6
1,866,602	+				+0.2
1,866,652	-				+1.3
1,866,652	-				+2.2
1,866,719	+				+1.9
1,866,734	+				+1.2
1,866,740	+				-1.1
1,866,760	-				+2.6
1,866,803	-				+0.9
1,866,838	-				+0.8
1,866,867	+				+1.2
1,866,905	+		CCNA_01738	0.11	+0.8
1,866,985	+		CCNA_01738	0.14	+0.9
1,866,993	-		CCNA_01738	0.15	+0.4
1,867,028	+		CCNA_01738	0.16	+0.1
1,867,039	-		CCNA_01738	0.17	+0.8
1,867,074	+		CCNA_01738	0.18	+3.1
1,867,098	+		CCNA_01738	0.19	+0.6
1,867,147	+		CCNA_01738	0.21	+1.2
1,867,148	-		CCNA_01738	0.21	-0.6
1,867,205	-		CCNA_01738	0.23	+1.0
1,867,262	+		CCNA_01738	0.26	+0.1
1,867,269	-		CCNA_01738	0.26	-0.6
1,867,269	-		CCNA_01738	0.26	+0.0
1,867,306	-		CCNA_01738	0.28	-0.8
1,867,326	+		CCNA_01738	0.28	+2.6
1,867,358	+		CCNA_01738	0.30	+0.1
1,867,406	+		CCNA_01738	0.32	+0.7
1,867,407	-		CCNA_01738	0.32	+3.2