Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01623

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,743,536	+		CCNA_01622	0.62	-0.2
1,743,544	-		CCNA_01622	0.63	+0.8
1,743,675	+		CCNA_01622	0.69	+3.7
1,743,733	-		CCNA_01622	0.71	+0.9
1,743,733	-		CCNA_01622	0.71	-0.4
1,743,758	-				+3.9
1,743,773	-		CCNA_01622	0.73	+1.1
1,743,836	-		CCNA_01622	0.76	+0.1
1,743,877	+		CCNA_01622	0.78	+3.4
1,743,893	+		CCNA_01622	0.78	+3.3
1,743,920	+		CCNA_01622	0.79	+2.9
1,743,952	+		CCNA_01622	0.81	+2.6
1,743,977	+		CCNA_01622	0.82	+3.0
1,743,985	-		CCNA_01622	0.82	+0.5
1,744,039	-				+3.2
1,744,201	-				+2.7
1,744,370	+				+2.4
1,744,371	+				+2.0
1,744,399	+				+1.2
1,744,405	+				+2.1
1,744,407	+				+1.4
1,744,407	+				+0.3
1,744,407	-				+1.4
1,744,415	-				+1.1
1,744,433	+				+1.6
1,744,446	+				+1.1
1,744,446	+				+1.5
1,744,454	-				+0.3
1,744,454	-				+0.4
1,744,464	-				-1.3
1,744,464	-				-1.0
1,744,479	+				+1.5
1,744,479	+				+1.7
1,744,479	+				+2.8
1,744,485	-				+1.1
1,744,487	+				+0.4
1,744,487	+				+0.0
1,744,487	-				-0.1
1,744,487	-				+4.5
1,744,487	-				-0.5
1,744,487	-				-1.0
1,744,487	-				-0.2
1,744,495	-				+2.2
1,744,500	+				+0.1
1,744,500	+				-0.9
1,744,500	+				-0.5
1,744,500	+				+0.6
1,744,500	+				+0.4
1,744,501	-				+2.5
1,744,508	-				-0.1
1,744,508	-				+1.3
1,744,508	-				+1.3
1,744,512	+				-0.4
1,744,514	-				+1.8
1,744,518	+				+0.5
1,744,520	-				+1.8
1,744,520	-				+1.1
1,744,520	-				+1.0
1,744,583	-		CCNA_01623	0.16	+2.5
1,744,596	-		CCNA_01623	0.20	+1.7
1,744,607	-		CCNA_01623	0.22	+1.6
1,744,655	+		CCNA_01623	0.34	+2.4
1,744,655	+		CCNA_01623	0.34	+1.0
1,744,655	+		CCNA_01623	0.34	+1.7
1,744,655	+		CCNA_01623	0.34	-0.6
1,744,663	-		CCNA_01623	0.35	+1.0
1,744,665	+		CCNA_01623	0.36	+0.0
1,744,673	-		CCNA_01623	0.38	+0.8
1,744,673	-		CCNA_01623	0.38	+1.2
1,744,771	+		CCNA_01623	0.61	+1.1
1,744,773	+		CCNA_01623	0.62	-1.5
1,744,781	-		CCNA_01623	0.64	+2.5
1,744,821	+		CCNA_01623	0.73	+1.9
1,744,829	-		CCNA_01623	0.75	+0.6
1,744,869	-		CCNA_01623	0.85	+1.2
1,744,871	+		CCNA_01623	0.85	-0.1
1,744,871	+		CCNA_01623	0.85	+0.3
1,744,879	-		CCNA_01623	0.87	-0.1
1,744,887	-		CCNA_01623	0.89	+0.4
1,744,966	-				+0.2
1,745,004	-				+0.5
1,745,072	+				+2.1
1,745,094	+		CCNA_01624	0.14	+3.3
1,745,125	+		CCNA_01624	0.19	+4.0
1,745,165	+		CCNA_01624	0.26	+3.4
1,745,165	-		CCNA_01624	0.26	+2.4
1,745,178	-		CCNA_01624	0.28	+0.7
1,745,207	-		CCNA_01624	0.33	+1.3
1,745,212	-		CCNA_01624	0.34	+0.5
1,745,244	-		CCNA_01624	0.39	+0.5
1,745,244	-				+3.5
1,745,285	-		CCNA_01624	0.46	-0.3
1,745,356	+		CCNA_01624	0.58	+3.3
1,745,356	+		CCNA_01624	0.58	+3.3
1,745,390	-		CCNA_01624	0.64	+1.7
1,745,606	+				+3.6
1,745,622	+				+3.8
1,745,629	-				-1.8
1,745,757	+				+2.5
1,745,757	+				+2.1
1,745,757	+				+2.1
1,745,763	+				+0.9
1,745,765	-				+2.2
1,745,765	-				+1.8
1,745,768	+				+1.6
1,745,768	+				+2.0
1,745,770	-				-0.4
1,745,816	+				+0.9
1,745,834	-				+1.4
1,745,834	-				-1.5
1,745,837	+				-0.8
1,745,916	-				+0.0
1,745,933	+		CCNA_01625	0.10	+2.0