Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01405

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,523,896	+				+3.6
1,523,906	+				+4.3
1,523,906	+				+3.8
1,524,029	-				+1.9
1,524,069	-				+0.4
1,524,132	-		CCNA_01405	0.17	+1.7
1,524,215	+		CCNA_01405	0.42	+0.6
1,524,223	-		CCNA_01405	0.45	+1.4
1,524,223	-		CCNA_01405	0.45	+2.1
1,524,223	-		CCNA_01405	0.45	+3.6
1,524,276	+		CCNA_01405	0.61	-0.3
1,524,276	-		CCNA_01405	0.61	+0.9
1,524,284	-		CCNA_01405	0.63	+2.2
1,524,320	-		CCNA_01405	0.74	+1.1
1,524,341	-		CCNA_01405	0.81	+4.0
1,524,499	+				+4.3
1,524,532	-				+1.3
1,524,593	+				+1.6
1,524,593	+				-0.4
1,524,626	-				+3.5
1,524,640	+				+0.6
1,524,653	-				+3.7
1,524,703	-				+3.1
1,524,703	-				+2.4
1,524,704	-				+3.4
1,524,714	-		CCNA_01406	0.11	+3.8
1,524,721	+		CCNA_01406	0.12	-0.7
1,524,767	-		CCNA_01406	0.17	+3.6
1,524,783	+		CCNA_01406	0.19	+1.5
1,524,783	+		CCNA_01406	0.19	-0.9
1,524,791	-		CCNA_01406	0.20	+3.8
1,524,791	-		CCNA_01406	0.20	+3.5
1,524,913	+		CCNA_01406	0.34	-1.2
1,524,921	-		CCNA_01406	0.35	+4.4
1,524,932	+		CCNA_01406	0.36	-0.7
1,524,955	+				+2.3
1,524,956	-				+4.3
1,524,963	-		CCNA_01406	0.40	+2.7
1,524,985	-		CCNA_01406	0.42	+2.6
1,524,987	-		CCNA_01406	0.43	+2.8
1,525,010	+		CCNA_01406	0.45	+0.4
1,525,063	+		CCNA_01406	0.52	+0.1
1,525,071	+		CCNA_01406	0.52	-1.5
1,525,095	-		CCNA_01406	0.55	+1.8
1,525,101	+		CCNA_01406	0.56	+0.7
1,525,210	-		CCNA_01406	0.69	+2.0
1,525,251	-		CCNA_01406	0.73	+2.5
1,525,252	+		CCNA_01406	0.74	+1.7
1,525,282	+		CCNA_01406	0.77	+0.2
1,525,287	+		CCNA_01406	0.78	+0.9
1,525,295	-		CCNA_01406	0.79	+3.7
1,525,342	+		CCNA_01406	0.84	-0.0
1,525,350	-		CCNA_01406	0.85	+1.9
1,525,350	-		CCNA_01406	0.85	+1.8
1,525,350	-		CCNA_01406	0.85	+1.8