Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01400

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,519,123	+		CCNA_01399	0.37	+2.0
1,519,182	+		CCNA_01399	0.41	+2.0
1,519,201	+		CCNA_01399	0.42	+0.4
1,519,204	-		CCNA_01399	0.42	-1.6
1,519,206	+		CCNA_01399	0.42	+0.7
1,519,209	-		CCNA_01399	0.43	+0.2
1,519,214	-		CCNA_01399	0.43	-0.3
1,519,219	-		CCNA_01399	0.43	+0.7
1,519,222	+		CCNA_01399	0.43	+0.7
1,519,229	-		CCNA_01399	0.44	+0.7
1,519,229	-		CCNA_01399	0.44	-1.3
1,519,235	-		CCNA_01399	0.44	+1.3
1,519,244	-		CCNA_01399	0.45	-1.1
1,519,246	+		CCNA_01399	0.45	-0.6
1,519,265	+		CCNA_01399	0.46	+1.5
1,519,310	-		CCNA_01399	0.49	-0.3
1,519,313	+		CCNA_01399	0.49	+2.3
1,519,313	+				+2.7
1,519,321	+		CCNA_01399	0.50	+1.5
1,519,323	+		CCNA_01399	0.50	-0.6
1,519,326	+		CCNA_01399	0.50	+0.1
1,519,329	-		CCNA_01399	0.50	+3.1
1,519,361	+		CCNA_01399	0.53	+1.5
1,519,361	+		CCNA_01399	0.53	+0.0
1,519,366	+		CCNA_01399	0.53	-0.4
1,519,369	-		CCNA_01399	0.53	-1.4
1,519,369	-		CCNA_01399	0.53	-0.8
1,519,379	-		CCNA_01399	0.54	-1.8
1,519,434	-		CCNA_01399	0.57	-0.3
1,519,434	-		CCNA_01399	0.57	+1.0
1,519,589	-		CCNA_01399	0.67	+0.3
1,519,609	+		CCNA_01399	0.69	+1.4
1,519,638	-		CCNA_01399	0.71	+2.3
1,519,654	+		CCNA_01399	0.72	-0.8
1,519,654	+		CCNA_01399	0.72	+0.4
1,519,654	+		CCNA_01399	0.72	+0.2
1,519,662	-		CCNA_01399	0.72	+0.4
1,519,662	-		CCNA_01399	0.72	+1.2
1,519,690	-		CCNA_01399	0.74	+1.2
1,519,759	-		CCNA_01399	0.78	-1.1
1,519,792	+		CCNA_01399	0.81	+1.5
1,519,800	-		CCNA_01399	0.81	-1.5
1,519,802	+		CCNA_01399	0.81	+0.7
1,519,802	+		CCNA_01399	0.81	-0.1
1,519,802	+		CCNA_01399	0.81	-0.9
1,519,802	+		CCNA_01399	0.81	-0.9
1,519,802	+				+2.3
1,519,802	+		CCNA_01399	0.81	+0.2
1,519,802	+		CCNA_01399	0.81	+0.1
1,519,810	-		CCNA_01399	0.82	+1.3
1,519,810	-		CCNA_01399	0.82	+0.3
1,519,810	-		CCNA_01399	0.82	-0.6
1,519,810	-		CCNA_01399	0.82	-2.1
1,519,810	-		CCNA_01399	0.82	-0.2
1,519,810	-		CCNA_01399	0.82	-0.7
1,519,810	-		CCNA_01399	0.82	+1.4
1,519,810	-		CCNA_01399	0.82	+0.5
1,519,810	-		CCNA_01399	0.82	-1.9
1,519,810	-		CCNA_01399	0.82	-1.0
1,519,810	-		CCNA_01399	0.82	+0.1
1,519,810	-		CCNA_01399	0.82	+0.5
1,519,810	-		CCNA_01399	0.82	-0.3
1,519,812	+		CCNA_01399	0.82	-0.9
1,519,827	+		CCNA_01399	0.83	+1.2
1,519,828	+		CCNA_01399	0.83	-0.4
1,519,834	-		CCNA_01399	0.83	-0.5
1,519,843	+		CCNA_01399	0.84	+1.1
1,520,000	+				+0.8
1,520,020	+				+1.9
1,520,184	-		CCNA_01400	0.20	+0.6
1,520,196	+		CCNA_01400	0.24	+0.6
1,520,245	+		CCNA_01400	0.38	+0.6
1,520,266	+		CCNA_01400	0.45	-0.3
1,520,290	+		CCNA_01400	0.52	+1.5
1,520,298	-		CCNA_01400	0.54	-0.1
1,520,366	+		CCNA_01400	0.74	-1.5
1,520,375	-		CCNA_01400	0.77	+0.4
1,520,391	+		CCNA_01400	0.81	-1.3
1,520,433	-				+0.9
1,520,433	-				-1.4
1,520,456	+				+1.3
1,520,482	+				+0.9
1,520,482	+				+1.0
1,520,629	-				+0.9
1,520,743	-				+1.5
1,520,744	-				-1.1
1,520,782	-				-0.0
1,520,782	-				+1.5
1,520,793	+				-1.4
1,520,814	+				+4.3