Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01361

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,476,641	+		CCNA_01360	0.50	+1.0
1,476,649	-		CCNA_01360	0.51	-1.2
1,476,651	+		CCNA_01360	0.51	+1.2
1,476,651	+		CCNA_01360	0.51	+1.0
1,476,659	-		CCNA_01360	0.52	+1.0
1,476,672	+		CCNA_01360	0.52	-0.6
1,476,690	+		CCNA_01360	0.54	+2.0
1,476,752	-		CCNA_01360	0.58	+2.0
1,476,770	+				+1.6
1,476,770	+		CCNA_01360	0.59	+2.1
1,476,778	-		CCNA_01360	0.59	-1.2
1,476,800	-		CCNA_01360	0.61	+0.2
1,476,854	-		CCNA_01360	0.65	+0.0
1,476,858	+		CCNA_01360	0.65	+0.6
1,476,858	+		CCNA_01360	0.65	+1.4
1,476,894	+		CCNA_01360	0.67	+1.4
1,476,967	+		CCNA_01360	0.72	+1.2
1,476,991	-		CCNA_01360	0.74	-0.2
1,477,048	+		CCNA_01360	0.77	+1.2
1,477,107	+		CCNA_01360	0.81	+2.3
1,477,173	+		CCNA_01360	0.86	+1.2
1,477,181	-		CCNA_01360	0.86	+0.6
1,477,197	-		CCNA_01360	0.87	-1.2
1,477,197	-		CCNA_01360	0.87	-0.5
1,477,270	+				+0.4
1,477,279	+				-1.2
1,477,308	+				-0.1
1,477,308	+				+1.2
1,477,308	+				+1.3
1,477,316	+				+0.9
1,477,316	-				+0.7
1,477,409	+				+0.7
1,477,409	+				-0.0
1,477,417	-				+1.2
1,477,432	+				-0.0
1,477,508	+				+1.2
1,477,571	+				-1.6
1,477,577	+				-0.0
1,477,662	+		CCNA_01361	0.26	+4.2
1,477,780	+		CCNA_01361	0.60	+4.4
1,477,793	-		CCNA_01361	0.64	-0.9
1,477,801	+		CCNA_01361	0.66	+4.5
1,477,892	+				+3.8
1,477,892	+				+4.1
1,477,909	+				+1.1
1,477,951	+				+2.8
1,477,951	+				+0.7
1,478,025	+		CCNA_01362	0.17	+0.1
1,478,033	-		CCNA_01362	0.18	+1.4
1,478,038	+		CCNA_01362	0.19	+1.2
1,478,175	+		CCNA_01362	0.39	+1.2
1,478,183	-		CCNA_01362	0.41	+1.0
1,478,202	+		CCNA_01362	0.43	-0.7
1,478,275	-		CCNA_01362	0.54	-1.3
1,478,283	-		CCNA_01362	0.55	-0.7
1,478,287	+		CCNA_01362	0.56	-1.0
1,478,333	+		CCNA_01362	0.63	-0.8
1,478,333	-		CCNA_01362	0.63	+0.0
1,478,338	+		CCNA_01362	0.64	-0.0
1,478,338	+		CCNA_01362	0.64	+0.7
1,478,338	+		CCNA_01362	0.64	-0.5
1,478,338	+		CCNA_01362	0.64	+0.7
1,478,346	-		CCNA_01362	0.65	-0.8
1,478,405	+		CCNA_01362	0.74	-1.2
1,478,443	+		CCNA_01362	0.79	-0.0
1,478,445	+		CCNA_01362	0.80	+0.3
1,478,445	+		CCNA_01362	0.80	+1.0
1,478,445	+		CCNA_01362	0.80	-1.8
1,478,445	+		CCNA_01362	0.80	+0.4
1,478,445	+		CCNA_01362	0.80	-1.3
1,478,445	+		CCNA_01362	0.80	-0.0
1,478,445	+		CCNA_01362	0.80	-0.1
1,478,445	+		CCNA_01362	0.80	+1.0
1,478,445	+		CCNA_01362	0.80	-1.2
1,478,453	-		CCNA_01362	0.81	-1.0
1,478,453	-		CCNA_01362	0.81	-0.5
1,478,453	-		CCNA_01362	0.81	+0.0
1,478,453	-		CCNA_01362	0.81	+1.6
1,478,453	-		CCNA_01362	0.81	+0.2
1,478,480	-		CCNA_01362	0.85	-1.5
1,478,514	+				+1.4
1,478,530	+				-0.5
1,478,545	+				-0.7
1,478,545	+				+0.7
1,478,553	-				+1.9
1,478,594	-				-1.7
1,478,709	-				-1.4
1,478,709	-				+0.3
1,478,721	+		CCNA_01363	0.11	+1.5
1,478,729	-		CCNA_01363	0.11	-0.6
1,478,729	-		CCNA_01363	0.11	+1.6
1,478,729	-		CCNA_01363	0.11	+0.9
1,478,789	-		CCNA_01363	0.16	+1.7
1,478,841	+		CCNA_01363	0.19	-0.2
1,478,907	+		CCNA_01363	0.24	+4.4
1,478,915	-		CCNA_01363	0.25	+0.2