Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01351

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
1,462,231	-				-1.2
1,462,231	-				+1.0
1,462,241	-				-0.9
1,462,241	-				+0.4
1,462,256	+				+0.2
1,462,280	-				+4.4
1,463,159	-				+2.4
1,463,322	+		CCNA_01351	0.13	+0.4
1,463,342	+		CCNA_01351	0.16	-1.0
1,463,350	-		CCNA_01351	0.17	-0.8
1,463,372	+		CCNA_01351	0.20	-1.6
1,463,385	+		CCNA_01351	0.22	-0.4
1,463,385	+		CCNA_01351	0.22	+1.8
1,463,385	+		CCNA_01351	0.22	+1.4
1,463,393	-		CCNA_01351	0.23	+0.2
1,463,414	+		CCNA_01351	0.26	+0.1
1,463,422	-		CCNA_01351	0.27	+0.4
1,463,428	-		CCNA_01351	0.27	+1.4
1,463,436	-		CCNA_01351	0.29	-1.5
1,463,472	+		CCNA_01351	0.33	+1.0
1,463,480	-		CCNA_01351	0.35	+0.5
1,463,490	-		CCNA_01351	0.36	+1.7
1,463,592	+		CCNA_01351	0.50	-0.3
1,463,622	-		CCNA_01351	0.54	+1.0
1,463,675	+		CCNA_01351	0.61	+0.4
1,463,675	+		CCNA_01351	0.61	+0.2
1,463,683	-		CCNA_01351	0.62	+0.6
1,463,685	-		CCNA_01351	0.63	+2.8
1,463,687	+		CCNA_01351	0.63	+0.9
1,463,731	+		CCNA_01351	0.69	+0.2
1,463,732	-		CCNA_01351	0.69	+2.4
1,463,737	-		CCNA_01351	0.70	-1.3
1,463,749	+		CCNA_01351	0.71	+0.9
1,463,781	-		CCNA_01351	0.76	+0.7
1,463,811	-		CCNA_01351	0.80	-0.3
1,463,811	-		CCNA_01351	0.80	-0.3
1,463,811	-		CCNA_01351	0.80	+1.0
1,463,842	+		CCNA_01351	0.84	-0.6
1,463,850	-		CCNA_01351	0.85	-1.8
1,463,850	-		CCNA_01351	0.85	-0.3
1,463,850	-		CCNA_01351	0.85	+0.7
1,463,878	+		CCNA_01351	0.89	-0.3
1,463,878	+		CCNA_01351	0.89	-0.2
1,463,885	-				-0.2
1,463,996	-				+0.6
1,463,998	+				+1.1
1,464,006	-				+0.6
1,464,009	+				-0.9
1,464,016	+				-0.5
1,464,040	+				-1.2
1,464,040	+				-1.3
1,464,040	+				+1.0
1,464,048	-				+2.1
1,464,048	-				+1.4
1,464,061	-				-0.5
1,464,066	+				+0.6
1,464,078	+				+0.5
1,464,086	-				+1.6
1,464,086	-				+1.0
1,464,088	+				-1.7
1,464,088	+				+0.4
1,464,088	+				-0.3
1,464,088	+				+1.6
1,464,088	+				+0.5
1,464,088	+				-1.3
1,464,096	-				-0.6
1,464,096	-				+0.8
1,464,096	-				+0.9
1,464,096	-				+0.9
1,464,097	-				+1.4
1,464,102	-				+1.7
1,464,107	+				-1.4
1,464,119	-				-1.5
1,464,137	-		CCNA_01352	0.11	-1.5
1,464,144	+		CCNA_01352	0.11	+1.4
1,464,282	+		CCNA_01352	0.20	-1.0
1,464,290	-		CCNA_01352	0.20	-0.2
1,464,290	-		CCNA_01352	0.20	+1.8
1,464,347	+		CCNA_01352	0.24	+0.1
1,464,355	-		CCNA_01352	0.24	-0.3
1,464,360	-		CCNA_01352	0.25	+1.1
1,464,368	+		CCNA_01352	0.25	+0.2
1,464,376	-		CCNA_01352	0.26	+2.6
1,464,416	-		CCNA_01352	0.28	+0.8
1,464,438	-		CCNA_01352	0.29	+1.3
1,464,451	+		CCNA_01352	0.30	+1.0
1,464,451	+		CCNA_01352	0.30	+0.1
1,464,451	+		CCNA_01352	0.30	+0.6
1,464,451	+		CCNA_01352	0.30	-1.0
1,464,451	+		CCNA_01352	0.30	+1.2
1,464,456	+		CCNA_01352	0.31	+0.5
1,464,459	-		CCNA_01352	0.31	+1.2
1,464,459	-		CCNA_01352	0.31	-0.2
1,464,464	-		CCNA_01352	0.31	+0.7
1,464,474	-		CCNA_01352	0.32	+1.5
1,464,474	-		CCNA_01352	0.32	-0.4
1,464,523	-		CCNA_01352	0.35	+2.4
1,464,523	-		CCNA_01352	0.35	+0.6
1,464,540	-		CCNA_01352	0.36	+0.7
1,464,579	-		CCNA_01352	0.38	+0.1
1,464,594	-		CCNA_01352	0.39	+0.1
1,464,594	-		CCNA_01352	0.39	-0.3
1,464,594	-		CCNA_01352	0.39	+0.5
1,464,631	+		CCNA_01352	0.41	-1.1
1,464,639	-		CCNA_01352	0.42	-0.2
1,464,639	-		CCNA_01352	0.42	+0.0
1,464,675	+		CCNA_01352	0.44	+1.2
1,464,726	+		CCNA_01352	0.47	-0.4
1,464,733	-		CCNA_01352	0.48	+1.1
1,464,741	-		CCNA_01352	0.48	+0.6
1,464,804	-		CCNA_01352	0.52	+1.0
1,464,807	+		CCNA_01352	0.52	+0.3
1,464,815	-		CCNA_01352	0.53	+1.6
1,464,853	+		CCNA_01352	0.55	+1.0
1,464,861	-		CCNA_01352	0.55	+0.2
1,464,861	-		CCNA_01352	0.55	+1.9
1,464,863	+		CCNA_01352	0.56	+0.4
1,464,863	+		CCNA_01352	0.56	+0.9
1,464,875	+		CCNA_01352	0.56	-0.2
1,464,877	+		CCNA_01352	0.56	+0.1
1,464,887	+		CCNA_01352	0.57	+0.6
1,464,955	+		CCNA_01352	0.61	+0.0