Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00099

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
108,250	+				+0.6
108,255	+				-0.8
108,257	+				-0.3
108,331	+				-0.6
108,384	-		CCNA_00097	0.11	+0.6
108,403	+		CCNA_00097	0.15	-1.9
108,411	-		CCNA_00097	0.17	-0.4
108,416	-		CCNA_00097	0.18	-0.4
108,459	+		CCNA_00097	0.27	-0.7
108,512	-		CCNA_00097	0.39	-1.3
108,524	-		CCNA_00097	0.41	-0.5
108,529	-		CCNA_00097	0.42	-1.2
108,681	-		CCNA_00097	0.76	+0.3
108,681	-		CCNA_00097	0.76	-0.8
108,880	+				+0.6
108,922	-				-1.7
108,932	-				+0.8
108,937	-				+1.1
108,940	+				-0.1
108,948	-				-0.5
108,948	-				-0.2
108,948	-				+1.1
108,964	+				-0.6
108,964	+				+0.6
108,972	-		CCNA_00098	0.10	+0.9
108,972	-		CCNA_00098	0.10	+1.0
108,974	+		CCNA_00098	0.11	-1.1
109,004	-		CCNA_00098	0.21	+0.2
109,004	-		CCNA_00098	0.21	-1.3
109,016	-		CCNA_00098	0.25	+0.5
109,047	+		CCNA_00098	0.36	-1.6
109,106	+		CCNA_00098	0.56	+0.4
109,106	+		CCNA_00098	0.56	-1.2
109,112	+		CCNA_00098	0.58	+0.6
109,114	-		CCNA_00098	0.59	+0.4
109,126	-		CCNA_00098	0.63	+0.7
109,144	+		CCNA_00098	0.69	+1.2
109,144	+		CCNA_00098	0.69	-1.2
109,145	+		CCNA_00098	0.69	-1.3
109,152	-		CCNA_00098	0.72	+1.7
109,152	-		CCNA_00098	0.72	-0.3
109,169	+		CCNA_00098	0.78	-1.1
109,170	-		CCNA_00098	0.78	-0.3
109,170	-		CCNA_00098	0.78	-0.1
109,206	-				-0.3
109,249	+				+0.5
109,251	-				+0.2
109,251	-				-0.5
109,254	+				-0.8
109,267	-				+1.3
109,348	-				+0.5
109,410	-				+1.4
109,453	+		CCNA_00099	0.12	+2.4
109,486	+		CCNA_00099	0.14	+0.5
109,499	-		CCNA_00099	0.15	+0.8
109,521	+		CCNA_00099	0.16	-0.2
109,533	+		CCNA_00099	0.17	+1.2
109,539	+		CCNA_00099	0.17	-0.7
109,541	+		CCNA_00099	0.17	+0.8
109,541	-				+1.4
109,569	+		CCNA_00099	0.19	+0.7
109,577	-		CCNA_00099	0.20	+1.1
109,600	-		CCNA_00099	0.21	-1.0
109,607	-		CCNA_00099	0.21	-1.4
109,608	-		CCNA_00099	0.21	+0.0
109,610	+		CCNA_00099	0.21	-0.3
109,611	+		CCNA_00099	0.21	-0.5
109,613	-		CCNA_00099	0.22	-0.4
109,647	-		CCNA_00099	0.24	+0.3
109,666	+		CCNA_00099	0.25	-0.1
109,686	-		CCNA_00099	0.26	-0.3
109,711	+		CCNA_00099	0.27	+0.2
109,714	-		CCNA_00099	0.27	+0.9
109,714	-		CCNA_00099	0.27	-0.6
109,772	+		CCNA_00099	0.31	+0.5
109,796	+		CCNA_00099	0.32	+1.6
109,796	+		CCNA_00099	0.32	-1.0
109,851	-		CCNA_00099	0.35	+1.3
109,886	+		CCNA_00099	0.37	-0.1
109,904	-		CCNA_00099	0.38	+2.0
109,954	-		CCNA_00099	0.41	+1.8
110,012	-		CCNA_00099	0.45	+1.2
110,025	+		CCNA_00099	0.45	+1.6
110,035	+		CCNA_00099	0.46	-0.9
110,116	+		CCNA_00099	0.51	-0.7
110,124	-		CCNA_00099	0.51	+0.6
110,124	-		CCNA_00099	0.51	+0.6
110,150	+		CCNA_00099	0.53	+1.3
110,150	+		CCNA_00099	0.53	+0.5
110,155	+		CCNA_00099	0.53	+1.2
110,174	+		CCNA_00099	0.54	+1.0
110,182	-		CCNA_00099	0.54	+0.6
110,182	-		CCNA_00099	0.54	+0.2
110,201	-		CCNA_00099	0.56	+0.2
110,221	-		CCNA_00099	0.57	+0.8
110,226	-		CCNA_00099	0.57	+1.2
110,232	-		CCNA_00099	0.57	+0.4
110,261	+		CCNA_00099	0.59	-0.7
110,264	+		CCNA_00099	0.59	-0.1
110,264	-		CCNA_00099	0.59	+0.6
110,269	-		CCNA_00099	0.60	+1.5
110,269	-		CCNA_00099	0.60	+0.8
110,277	+		CCNA_00099	0.60	-1.4
110,310	-		CCNA_00099	0.62	+1.2
110,336	+		CCNA_00099	0.63	-0.0
110,344	-		CCNA_00099	0.64	+1.6
110,377	-		CCNA_00099	0.66	+0.9
110,437	-		CCNA_00099	0.69	+1.1
110,491	-		CCNA_00099	0.72	+1.1
110,513	+		CCNA_00099	0.74	-1.1
110,582	+		CCNA_00099	0.78	+0.3
110,583	+		CCNA_00099	0.78	+0.2
110,590	-		CCNA_00099	0.78	+1.1
110,653	-		CCNA_00099	0.82	+0.9
110,717	+		CCNA_00099	0.85	-0.3
110,717	+		CCNA_00099	0.85	+0.4
110,732	+		CCNA_00099	0.86	-1.3
110,740	-		CCNA_00099	0.87	+0.8
110,786	+		CCNA_00099	0.89	+0.5
110,786	+		CCNA_00099	0.89	-0.5
110,794	-		CCNA_00099	0.90	+2.7
110,794	-		CCNA_00099	0.90	+1.5
110,815	+				-1.3
110,815	+				+0.1
110,838	-				+0.9
110,860	-				-0.5
110,904	+				-1.6
110,907	-				+1.7
110,907	-				+1.4
110,940	-				+1.7
111,634	+				-1.6
111,642	-				+1.0
111,654	+				+0.4
111,655	+				-1.7
111,719	+				-0.0
111,767	-				+1.0
111,798	+				-0.7
111,828	+				+2.2
111,832	-				-0.4
111,836	-				-1.4
111,836	-				-0.1
111,841	-				+0.8
111,843	+				-1.0
111,925	-		CCNA_00101	0.14	-0.3
111,925	-		CCNA_00101	0.14	+0.5
111,929	+		CCNA_00101	0.14	-0.9