Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00023

Experiment: PYE with nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 5 mM
22,748	-		CCNA_00021	0.87	+1.4
22,748	-		CCNA_00021	0.87	+1.0
22,769	-		CCNA_00021	0.88	-3.1
22,787	+		CCNA_00021	0.89	-1.2
22,800	+		CCNA_00021	0.89	-0.3
22,815	+				+1.2
22,860	+				-1.0
22,860	+				-0.7
22,873	+				+1.6
22,873	+				+0.5
22,873	+				+1.4
22,873	+				-1.9
22,881	-				+0.3
22,881	-				-1.8
22,881	-				+0.0
22,918	-				+0.6
22,924	+				+0.2
22,972	-				+0.9
22,988	+				-0.0
23,008	-				+1.1
23,050	-				-0.8
23,090	+		CCNA_00022	0.11	-1.2
23,220	-		CCNA_00022	0.36	-0.3
23,232	+		CCNA_00022	0.38	-1.0
23,273	-		CCNA_00022	0.46	-0.1
23,297	+		CCNA_00022	0.50	-0.7
23,305	-		CCNA_00022	0.52	+1.5
23,307	+		CCNA_00022	0.52	+0.4
23,310	-		CCNA_00022	0.53	+0.2
23,326	+		CCNA_00022	0.56	-1.2
23,342	+		CCNA_00022	0.59	-1.3
23,366	+		CCNA_00022	0.63	-0.4
23,415	-		CCNA_00022	0.73	+0.2
23,415	-		CCNA_00022	0.73	+0.7
23,433	+		CCNA_00022	0.76	-1.2
23,462	+		CCNA_00022	0.82	+0.4
23,491	+		CCNA_00022	0.87	-1.0
23,491	+		CCNA_00022	0.87	+2.6
23,491	+		CCNA_00022	0.87	-0.5
23,494	-		CCNA_00022	0.88	+1.3
23,494	-		CCNA_00022	0.88	+2.1
23,548	+				+1.4
23,548	+				+1.2
23,548	+				-1.0
23,556	-				+4.0
23,556	-				-0.3
23,556	-				+3.2
23,556	-				-1.6
23,598	+				-1.2
23,607	+				+1.2
23,609	+				+0.8
23,609	+				-0.7
23,627	-				+0.7
23,627	-				+1.8
23,632	-				+3.9
23,666	+				+0.6
23,674	-				-0.5
23,723	+				+0.6
23,724	+				+0.2
23,732	-				-0.1
23,739	+				+1.9
23,876	+		CCNA_00023	0.40	+0.8
23,919	-		CCNA_00023	0.53	+0.2
23,965	+		CCNA_00023	0.67	-1.1
23,993	+		CCNA_00023	0.75	+0.2
24,001	-		CCNA_00023	0.78	+0.8
24,019	-		CCNA_00023	0.83	-1.5
24,020	-		CCNA_00023	0.83	-0.9
24,041	-				-1.0
24,075	+				-0.1
24,083	-				-1.6
24,165	+				+0.8
24,240	+		CCNA_00024	0.17	+0.2
24,283	-		CCNA_00024	0.22	+0.6
24,322	+		CCNA_00024	0.26	-0.4
24,322	+		CCNA_00024	0.26	+0.3
24,328	-		CCNA_00024	0.27	+0.2
24,358	-		CCNA_00024	0.30	+1.0
24,443	+		CCNA_00024	0.40	-0.1
24,444	-		CCNA_00024	0.40	+1.0
24,492	-		CCNA_00024	0.45	+0.8
24,492	-		CCNA_00024	0.45	+1.2
24,516	+		CCNA_00024	0.48	+0.6
24,516	+		CCNA_00024	0.48	+0.4
24,524	-		CCNA_00024	0.49	+1.5
24,531	+		CCNA_00024	0.49	-1.1
24,531	+		CCNA_00024	0.49	+1.2
24,531	+		CCNA_00024	0.49	-0.1
24,563	+		CCNA_00024	0.53	-0.1
24,629	+		CCNA_00024	0.60	+1.3
24,660	-		CCNA_00024	0.64	+0.2
24,666	-		CCNA_00024	0.65	-0.4
24,675	+		CCNA_00024	0.66	+0.7
24,698	-		CCNA_00024	0.68	+2.9
24,795	+		CCNA_00024	0.79	+0.6
24,848	+		CCNA_00024	0.85	+1.6
24,856	-		CCNA_00024	0.86	+1.1
24,857	+		CCNA_00024	0.86	+0.6
24,920	-				-0.5
24,925	+				-1.0
24,932	+				-0.8
24,936	+				-0.4
24,940	-				+0.8
24,942	+				-1.0
24,969	-				+0.7
24,978	-				+1.0
25,013	+				+2.0
25,016	-				+1.2
25,043	+				+1.0
25,048	+				-0.3
25,053	+				-0.1
25,060	+				+0.6
25,061	-				-1.7
25,061	-				+1.0