Experiment: Spectinomycin 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21480 and ABZR86_RS21485 overlap by 14 nucleotides ABZR86_RS21485 and ABZR86_RS21490 are separated by 270 nucleotides ABZR86_RS21490 and ABZR86_RS21495 are separated by 3 nucleotides
ABZR86_RS21480: ABZR86_RS21480 - arginase family protein, at 263,265 to 264,140
_RS21480
ABZR86_RS21485: ABZR86_RS21485 - GNAT family N-acetyltransferase, at 264,127 to 265,194
_RS21485
ABZR86_RS21490: ABZR86_RS21490 - phosphopantetheine-binding protein, at 265,465 to 265,716
_RS21490
ABZR86_RS21495: ABZR86_RS21495 - beta-ketoacyl-[acyl-carrier-protein] synthase family protein, at 265,720 to 266,934
_RS21495
Position (kb) 264
265
266 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6
7
8 at 263.161 kb on + strand at 263.513 kb on + strand, within ABZR86_RS21480 at 263.526 kb on - strand, within ABZR86_RS21480 at 263.560 kb on + strand, within ABZR86_RS21480 at 263.560 kb on + strand, within ABZR86_RS21480 at 263.560 kb on + strand, within ABZR86_RS21480 at 263.561 kb on - strand, within ABZR86_RS21480 at 263.561 kb on - strand, within ABZR86_RS21480 at 263.693 kb on - strand, within ABZR86_RS21480 at 263.693 kb on - strand, within ABZR86_RS21480 at 263.725 kb on + strand, within ABZR86_RS21480 at 263.726 kb on - strand, within ABZR86_RS21480 at 263.726 kb on - strand, within ABZR86_RS21480 at 263.726 kb on - strand, within ABZR86_RS21480 at 263.726 kb on - strand, within ABZR86_RS21480 at 263.726 kb on - strand, within ABZR86_RS21480 at 263.878 kb on - strand, within ABZR86_RS21480 at 264.266 kb on + strand, within ABZR86_RS21485 at 264.267 kb on - strand, within ABZR86_RS21485 at 264.267 kb on - strand, within ABZR86_RS21485 at 264.302 kb on + strand, within ABZR86_RS21485 at 264.303 kb on - strand, within ABZR86_RS21485 at 264.303 kb on - strand, within ABZR86_RS21485 at 264.303 kb on - strand, within ABZR86_RS21485 at 264.359 kb on + strand, within ABZR86_RS21485 at 264.359 kb on + strand, within ABZR86_RS21485 at 264.359 kb on + strand, within ABZR86_RS21485 at 264.360 kb on - strand, within ABZR86_RS21485 at 264.360 kb on - strand, within ABZR86_RS21485 at 264.387 kb on - strand, within ABZR86_RS21485 at 264.401 kb on + strand, within ABZR86_RS21485 at 264.402 kb on - strand, within ABZR86_RS21485 at 264.402 kb on - strand, within ABZR86_RS21485 at 264.471 kb on - strand, within ABZR86_RS21485 at 264.563 kb on + strand, within ABZR86_RS21485 at 264.564 kb on - strand, within ABZR86_RS21485 at 264.564 kb on - strand, within ABZR86_RS21485 at 264.575 kb on + strand, within ABZR86_RS21485 at 264.576 kb on - strand, within ABZR86_RS21485 at 264.584 kb on + strand, within ABZR86_RS21485 at 264.584 kb on + strand, within ABZR86_RS21485 at 264.584 kb on + strand, within ABZR86_RS21485 at 264.585 kb on - strand, within ABZR86_RS21485 at 264.585 kb on - strand, within ABZR86_RS21485 at 264.585 kb on - strand, within ABZR86_RS21485 at 264.716 kb on + strand, within ABZR86_RS21485 at 264.716 kb on + strand, within ABZR86_RS21485 at 264.749 kb on + strand, within ABZR86_RS21485 at 264.749 kb on + strand, within ABZR86_RS21485 at 264.750 kb on - strand, within ABZR86_RS21485 at 264.750 kb on - strand, within ABZR86_RS21485 at 264.750 kb on - strand, within ABZR86_RS21485 at 264.750 kb on - strand, within ABZR86_RS21485 at 264.779 kb on + strand, within ABZR86_RS21485 at 264.779 kb on + strand, within ABZR86_RS21485 at 264.780 kb on - strand, within ABZR86_RS21485 at 265.188 kb on - strand at 265.188 kb on - strand at 265.188 kb on - strand at 265.295 kb on - strand at 265.946 kb on - strand, within ABZR86_RS21495 at 266.072 kb on - strand, within ABZR86_RS21495 at 266.072 kb on - strand, within ABZR86_RS21495 at 266.083 kb on + strand, within ABZR86_RS21495
Per-strain Table
Position Strand Gene LocusTag Fraction Spectinomycin 0.04 mg/ml remove 263,161 + +0.3 263,513 + ABZR86_RS21480 0.28 +7.9 263,526 - ABZR86_RS21480 0.30 +8.5 263,560 + ABZR86_RS21480 0.34 +8.1 263,560 + ABZR86_RS21480 0.34 +8.7 263,560 + ABZR86_RS21480 0.34 +8.0 263,561 - ABZR86_RS21480 0.34 +8.1 263,561 - ABZR86_RS21480 0.34 +7.8 263,693 - ABZR86_RS21480 0.49 +8.2 263,693 - ABZR86_RS21480 0.49 +7.8 263,725 + ABZR86_RS21480 0.53 +8.1 263,726 - ABZR86_RS21480 0.53 +7.5 263,726 - ABZR86_RS21480 0.53 +8.0 263,726 - ABZR86_RS21480 0.53 +7.7 263,726 - ABZR86_RS21480 0.53 +7.8 263,726 - ABZR86_RS21480 0.53 +7.9 263,878 - ABZR86_RS21480 0.70 +8.1 264,266 + ABZR86_RS21485 0.13 +6.2 264,267 - ABZR86_RS21485 0.13 +3.9 264,267 - ABZR86_RS21485 0.13 +5.6 264,302 + ABZR86_RS21485 0.16 +6.0 264,303 - ABZR86_RS21485 0.16 +6.0 264,303 - ABZR86_RS21485 0.16 +5.8 264,303 - ABZR86_RS21485 0.16 +6.0 264,359 + ABZR86_RS21485 0.22 +5.9 264,359 + ABZR86_RS21485 0.22 +6.0 264,359 + ABZR86_RS21485 0.22 +6.2 264,360 - ABZR86_RS21485 0.22 +5.7 264,360 - ABZR86_RS21485 0.22 +4.8 264,387 - ABZR86_RS21485 0.24 +5.6 264,401 + ABZR86_RS21485 0.26 +5.8 264,402 - ABZR86_RS21485 0.26 +5.8 264,402 - ABZR86_RS21485 0.26 +6.0 264,471 - ABZR86_RS21485 0.32 +6.1 264,563 + ABZR86_RS21485 0.41 +6.3 264,564 - ABZR86_RS21485 0.41 +5.3 264,564 - ABZR86_RS21485 0.41 +6.4 264,575 + ABZR86_RS21485 0.42 +6.3 264,576 - ABZR86_RS21485 0.42 +5.6 264,584 + ABZR86_RS21485 0.43 +6.7 264,584 + ABZR86_RS21485 0.43 +5.9 264,584 + ABZR86_RS21485 0.43 +6.1 264,585 - ABZR86_RS21485 0.43 +5.7 264,585 - ABZR86_RS21485 0.43 +5.6 264,585 - ABZR86_RS21485 0.43 +5.9 264,716 + ABZR86_RS21485 0.55 +6.6 264,716 + ABZR86_RS21485 0.55 +5.1 264,749 + ABZR86_RS21485 0.58 +6.1 264,749 + ABZR86_RS21485 0.58 +6.6 264,750 - ABZR86_RS21485 0.58 +6.5 264,750 - ABZR86_RS21485 0.58 +6.3 264,750 - ABZR86_RS21485 0.58 +6.1 264,750 - ABZR86_RS21485 0.58 +6.0 264,779 + ABZR86_RS21485 0.61 +6.1 264,779 + ABZR86_RS21485 0.61 +6.2 264,780 - ABZR86_RS21485 0.61 +6.3 265,188 - -0.3 265,188 - -1.4 265,188 - -0.1 265,295 - +0.2 265,946 - ABZR86_RS21495 0.19 +0.1 266,072 - ABZR86_RS21495 0.29 +0.8 266,072 - ABZR86_RS21495 0.29 +0.4 266,083 + ABZR86_RS21495 0.30 -0.2
Or see this region's nucleotide sequence