Experiment: Spectinomycin 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21150 and ABZR86_RS21155 are separated by 58 nucleotides ABZR86_RS21155 and ABZR86_RS21160 are separated by 106 nucleotides ABZR86_RS21160 and ABZR86_RS21165 are separated by 14 nucleotides ABZR86_RS21165 and ABZR86_RS21170 overlap by 4 nucleotides
ABZR86_RS21150: ABZR86_RS21150 - MBL fold metallo-hydrolase, at 198,073 to 198,960
_RS21150
ABZR86_RS21155: ABZR86_RS21155 - NAD(P)-dependent oxidoreductase, at 199,019 to 199,657
_RS21155
ABZR86_RS21160: ABZR86_RS21160 - cytochrome c, at 199,764 to 200,306
_RS21160
ABZR86_RS21165: ABZR86_RS21165 - copper resistance protein B, at 200,321 to 201,253
_RS21165
ABZR86_RS21170: ABZR86_RS21170 - copper resistance system multicopper oxidase, at 201,250 to 202,959
_RS21170
Position (kb) 199
200
201 Strain fitness (log2 ratio) -2
-1
0
1 at 198.799 kb on + strand, within ABZR86_RS21150 at 198.800 kb on - strand, within ABZR86_RS21150 at 198.800 kb on - strand, within ABZR86_RS21150 at 198.801 kb on + strand, within ABZR86_RS21150 at 198.811 kb on + strand, within ABZR86_RS21150 at 198.812 kb on - strand, within ABZR86_RS21150 at 198.812 kb on - strand, within ABZR86_RS21150 at 198.812 kb on - strand, within ABZR86_RS21150 at 198.812 kb on - strand, within ABZR86_RS21150 at 198.823 kb on + strand, within ABZR86_RS21150 at 198.823 kb on + strand, within ABZR86_RS21150 at 198.824 kb on - strand, within ABZR86_RS21150 at 198.824 kb on - strand, within ABZR86_RS21150 at 198.824 kb on - strand, within ABZR86_RS21150 at 198.824 kb on - strand, within ABZR86_RS21150 at 198.824 kb on - strand, within ABZR86_RS21150 at 198.958 kb on + strand at 198.990 kb on + strand at 199.092 kb on - strand, within ABZR86_RS21155 at 199.200 kb on + strand, within ABZR86_RS21155 at 199.472 kb on + strand, within ABZR86_RS21155 at 199.472 kb on + strand, within ABZR86_RS21155 at 199.472 kb on + strand, within ABZR86_RS21155 at 199.472 kb on + strand, within ABZR86_RS21155 at 199.473 kb on - strand, within ABZR86_RS21155 at 199.520 kb on + strand, within ABZR86_RS21155 at 199.586 kb on + strand, within ABZR86_RS21155 at 199.586 kb on + strand, within ABZR86_RS21155 at 199.586 kb on + strand, within ABZR86_RS21155 at 199.587 kb on - strand, within ABZR86_RS21155 at 199.681 kb on - strand at 200.021 kb on - strand, within ABZR86_RS21160 at 200.089 kb on + strand, within ABZR86_RS21160 at 200.090 kb on - strand, within ABZR86_RS21160 at 200.090 kb on - strand, within ABZR86_RS21160 at 200.249 kb on - strand, within ABZR86_RS21160 at 200.310 kb on + strand at 200.310 kb on + strand at 200.310 kb on + strand at 200.311 kb on - strand at 200.415 kb on + strand, within ABZR86_RS21165 at 200.515 kb on - strand, within ABZR86_RS21165 at 200.515 kb on - strand, within ABZR86_RS21165 at 200.543 kb on + strand, within ABZR86_RS21165 at 200.544 kb on - strand, within ABZR86_RS21165 at 200.544 kb on - strand, within ABZR86_RS21165 at 200.571 kb on + strand, within ABZR86_RS21165 at 200.571 kb on + strand, within ABZR86_RS21165 at 200.571 kb on + strand, within ABZR86_RS21165 at 200.571 kb on + strand, within ABZR86_RS21165 at 200.572 kb on - strand, within ABZR86_RS21165 at 200.756 kb on + strand, within ABZR86_RS21165 at 201.293 kb on + strand at 201.294 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Spectinomycin 0.04 mg/ml remove 198,799 + ABZR86_RS21150 0.82 -0.5 198,800 - ABZR86_RS21150 0.82 -0.7 198,800 - ABZR86_RS21150 0.82 -0.8 198,801 + ABZR86_RS21150 0.82 -0.0 198,811 + ABZR86_RS21150 0.83 +1.3 198,812 - ABZR86_RS21150 0.83 +0.5 198,812 - ABZR86_RS21150 0.83 +0.7 198,812 - ABZR86_RS21150 0.83 -1.3 198,812 - ABZR86_RS21150 0.83 -0.0 198,823 + ABZR86_RS21150 0.84 -0.3 198,823 + ABZR86_RS21150 0.84 -0.6 198,824 - ABZR86_RS21150 0.85 -0.1 198,824 - ABZR86_RS21150 0.85 -0.6 198,824 - ABZR86_RS21150 0.85 +0.8 198,824 - ABZR86_RS21150 0.85 -1.3 198,824 - ABZR86_RS21150 0.85 -0.8 198,958 + -0.5 198,990 + +0.4 199,092 - ABZR86_RS21155 0.11 +1.5 199,200 + ABZR86_RS21155 0.28 -0.7 199,472 + ABZR86_RS21155 0.71 +0.2 199,472 + ABZR86_RS21155 0.71 -0.3 199,472 + ABZR86_RS21155 0.71 -1.6 199,472 + ABZR86_RS21155 0.71 -0.5 199,473 - ABZR86_RS21155 0.71 -1.8 199,520 + ABZR86_RS21155 0.78 -0.1 199,586 + ABZR86_RS21155 0.89 +0.2 199,586 + ABZR86_RS21155 0.89 -0.3 199,586 + ABZR86_RS21155 0.89 -1.8 199,587 - ABZR86_RS21155 0.89 -1.2 199,681 - -0.5 200,021 - ABZR86_RS21160 0.47 +0.4 200,089 + ABZR86_RS21160 0.60 -0.6 200,090 - ABZR86_RS21160 0.60 -0.0 200,090 - ABZR86_RS21160 0.60 -0.2 200,249 - ABZR86_RS21160 0.89 -1.3 200,310 + -0.3 200,310 + +0.3 200,310 + +0.9 200,311 - +0.1 200,415 + ABZR86_RS21165 0.10 +0.7 200,515 - ABZR86_RS21165 0.21 +0.5 200,515 - ABZR86_RS21165 0.21 +0.1 200,543 + ABZR86_RS21165 0.24 +0.4 200,544 - ABZR86_RS21165 0.24 -0.8 200,544 - ABZR86_RS21165 0.24 -0.3 200,571 + ABZR86_RS21165 0.27 -1.9 200,571 + ABZR86_RS21165 0.27 -0.2 200,571 + ABZR86_RS21165 0.27 -0.4 200,571 + ABZR86_RS21165 0.27 -0.4 200,572 - ABZR86_RS21165 0.27 +0.0 200,756 + ABZR86_RS21165 0.47 -2.3 201,293 + -0.4 201,294 - -0.1
Or see this region's nucleotide sequence