Experiment: Spectinomycin 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20690 and ABZR86_RS20695 are separated by 124 nucleotides ABZR86_RS20695 and ABZR86_RS20700 overlap by 4 nucleotides
ABZR86_RS20690: ABZR86_RS20690 - class I fructose-bisphosphate aldolase, at 98,818 to 99,735
_RS20690
ABZR86_RS20695: ABZR86_RS20695 - amidohydrolase family protein, at 99,860 to 101,062
_RS20695
ABZR86_RS20700: ABZR86_RS20700 - transcriptional repressor AgaR, at 101,059 to 101,865
_RS20700
Position (kb) 99
100
101
102 Strain fitness (log2 ratio) -1
0
1 at 98.914 kb on + strand, within ABZR86_RS20690 at 98.914 kb on + strand, within ABZR86_RS20690 at 98.914 kb on + strand, within ABZR86_RS20690 at 98.914 kb on + strand, within ABZR86_RS20690 at 98.914 kb on + strand, within ABZR86_RS20690 at 98.915 kb on - strand, within ABZR86_RS20690 at 98.915 kb on - strand, within ABZR86_RS20690 at 98.915 kb on - strand, within ABZR86_RS20690 at 98.915 kb on - strand, within ABZR86_RS20690 at 98.915 kb on - strand, within ABZR86_RS20690 at 98.915 kb on - strand, within ABZR86_RS20690 at 99.022 kb on + strand, within ABZR86_RS20690 at 99.022 kb on + strand, within ABZR86_RS20690 at 99.023 kb on - strand, within ABZR86_RS20690 at 99.091 kb on + strand, within ABZR86_RS20690 at 99.091 kb on + strand, within ABZR86_RS20690 at 99.091 kb on + strand, within ABZR86_RS20690 at 99.091 kb on + strand, within ABZR86_RS20690 at 99.091 kb on + strand, within ABZR86_RS20690 at 99.091 kb on + strand, within ABZR86_RS20690 at 99.091 kb on + strand, within ABZR86_RS20690 at 99.091 kb on + strand, within ABZR86_RS20690 at 99.092 kb on - strand, within ABZR86_RS20690 at 99.092 kb on - strand, within ABZR86_RS20690 at 99.092 kb on - strand, within ABZR86_RS20690 at 99.092 kb on - strand, within ABZR86_RS20690 at 99.232 kb on + strand, within ABZR86_RS20690 at 99.241 kb on + strand, within ABZR86_RS20690 at 99.241 kb on + strand, within ABZR86_RS20690 at 99.241 kb on + strand, within ABZR86_RS20690 at 99.242 kb on - strand, within ABZR86_RS20690 at 99.242 kb on - strand, within ABZR86_RS20690 at 99.242 kb on - strand, within ABZR86_RS20690 at 99.242 kb on - strand, within ABZR86_RS20690 at 99.397 kb on + strand, within ABZR86_RS20690 at 99.616 kb on + strand, within ABZR86_RS20690 at 99.617 kb on - strand, within ABZR86_RS20690 at 99.617 kb on - strand, within ABZR86_RS20690 at 99.617 kb on - strand, within ABZR86_RS20690 at 99.617 kb on - strand, within ABZR86_RS20690 at 99.724 kb on + strand at 99.725 kb on - strand at 99.749 kb on - strand at 99.749 kb on - strand at 100.580 kb on + strand, within ABZR86_RS20695 at 100.580 kb on + strand, within ABZR86_RS20695 at 100.895 kb on + strand, within ABZR86_RS20695 at 100.904 kb on + strand, within ABZR86_RS20695 at 100.905 kb on - strand, within ABZR86_RS20695 at 100.907 kb on + strand, within ABZR86_RS20695 at 100.934 kb on + strand, within ABZR86_RS20695 at 100.985 kb on + strand at 100.985 kb on + strand at 100.986 kb on - strand at 101.022 kb on + strand at 101.022 kb on + strand at 101.022 kb on + strand at 101.022 kb on + strand at 101.023 kb on - strand at 101.024 kb on + strand at 101.025 kb on - strand at 101.025 kb on - strand at 101.050 kb on - strand at 101.050 kb on - strand at 101.131 kb on + strand at 101.132 kb on - strand at 101.464 kb on - strand, within ABZR86_RS20700 at 101.900 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Spectinomycin 0.04 mg/ml remove 98,914 + ABZR86_RS20690 0.10 -1.1 98,914 + ABZR86_RS20690 0.10 +1.1 98,914 + ABZR86_RS20690 0.10 +0.9 98,914 + ABZR86_RS20690 0.10 +0.1 98,914 + ABZR86_RS20690 0.10 -0.9 98,915 - ABZR86_RS20690 0.11 +0.4 98,915 - ABZR86_RS20690 0.11 +0.3 98,915 - ABZR86_RS20690 0.11 +0.3 98,915 - ABZR86_RS20690 0.11 +0.1 98,915 - ABZR86_RS20690 0.11 -1.5 98,915 - ABZR86_RS20690 0.11 -1.0 99,022 + ABZR86_RS20690 0.22 -0.7 99,022 + ABZR86_RS20690 0.22 +0.3 99,023 - ABZR86_RS20690 0.22 -0.9 99,091 + ABZR86_RS20690 0.30 +1.5 99,091 + ABZR86_RS20690 0.30 +0.6 99,091 + ABZR86_RS20690 0.30 -1.7 99,091 + ABZR86_RS20690 0.30 +0.6 99,091 + ABZR86_RS20690 0.30 +0.4 99,091 + ABZR86_RS20690 0.30 +0.7 99,091 + ABZR86_RS20690 0.30 -0.7 99,091 + ABZR86_RS20690 0.30 +0.3 99,092 - ABZR86_RS20690 0.30 +0.1 99,092 - ABZR86_RS20690 0.30 -0.0 99,092 - ABZR86_RS20690 0.30 +0.2 99,092 - ABZR86_RS20690 0.30 +0.4 99,232 + ABZR86_RS20690 0.45 +1.4 99,241 + ABZR86_RS20690 0.46 -0.2 99,241 + ABZR86_RS20690 0.46 +1.3 99,241 + ABZR86_RS20690 0.46 +0.5 99,242 - ABZR86_RS20690 0.46 +1.1 99,242 - ABZR86_RS20690 0.46 -1.2 99,242 - ABZR86_RS20690 0.46 -0.4 99,242 - ABZR86_RS20690 0.46 +0.3 99,397 + ABZR86_RS20690 0.63 -1.1 99,616 + ABZR86_RS20690 0.87 -1.5 99,617 - ABZR86_RS20690 0.87 +0.9 99,617 - ABZR86_RS20690 0.87 -1.0 99,617 - ABZR86_RS20690 0.87 -0.0 99,617 - ABZR86_RS20690 0.87 +0.1 99,724 + -0.3 99,725 - -0.1 99,749 - +1.1 99,749 - -0.9 100,580 + ABZR86_RS20695 0.60 +0.7 100,580 + ABZR86_RS20695 0.60 +0.0 100,895 + ABZR86_RS20695 0.86 +1.2 100,904 + ABZR86_RS20695 0.87 +0.4 100,905 - ABZR86_RS20695 0.87 -0.7 100,907 + ABZR86_RS20695 0.87 +0.2 100,934 + ABZR86_RS20695 0.89 -1.2 100,985 + +0.7 100,985 + +0.3 100,986 - +0.2 101,022 + +0.3 101,022 + -0.1 101,022 + -0.4 101,022 + -0.5 101,023 - -1.1 101,024 + -0.1 101,025 - -0.7 101,025 - +0.1 101,050 - +0.0 101,050 - -0.3 101,131 + -0.2 101,132 - +0.9 101,464 - ABZR86_RS20700 0.50 -0.3 101,900 + +0.3
Or see this region's nucleotide sequence