Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS12735

Experiment: Spectinomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.04 mg/ml
2,852,970	+				-0.0
2,852,971	-				-0.4
2,852,971	-				-1.2
2,853,157	+		ABZR86_RS12730	0.11	+0.3
2,853,167	-		ABZR86_RS12730	0.12	+0.8
2,853,319	+		ABZR86_RS12730	0.31	+1.3
2,853,390	+		ABZR86_RS12730	0.40	+0.5
2,853,391	-		ABZR86_RS12730	0.40	-0.3
2,853,440	-		ABZR86_RS12730	0.46	+0.2
2,853,440	-		ABZR86_RS12730	0.46	-0.2
2,854,047	+		ABZR86_RS12735	0.42	-0.6
2,854,047	+		ABZR86_RS12735	0.42	-0.6
2,854,048	-		ABZR86_RS12735	0.43	-0.3
2,854,048	-		ABZR86_RS12735	0.43	-1.1
2,854,048	-		ABZR86_RS12735	0.43	+0.3
2,854,155	+		ABZR86_RS12735	0.68	+1.8
2,854,156	-		ABZR86_RS12735	0.69	+0.9
2,854,156	-		ABZR86_RS12735	0.69	-0.3
2,854,156	-		ABZR86_RS12735	0.69	-0.2
2,854,156	-		ABZR86_RS12735	0.69	-1.3
2,854,199	-				-1.4
2,854,199	-				+0.3
2,854,285	-				+1.2
2,854,356	+				-0.2
2,854,357	-				+1.1
2,854,357	-				+0.7
2,854,357	-				-0.6
2,854,357	-				+0.3
2,854,357	-				-2.0
2,854,423	+		ABZR86_RS12740	0.14	-0.8
2,854,424	-		ABZR86_RS12740	0.14	-0.7
2,854,669	+		ABZR86_RS12740	0.29	+1.2
2,854,669	+		ABZR86_RS12740	0.29	-0.1
2,854,669	+		ABZR86_RS12740	0.29	+0.7
2,854,670	-		ABZR86_RS12740	0.29	-1.2
2,854,670	-		ABZR86_RS12740	0.29	-0.6
2,854,888	+		ABZR86_RS12740	0.43	-0.9
2,854,888	+		ABZR86_RS12740	0.43	+0.8
2,854,888	+		ABZR86_RS12740	0.43	-0.7
2,854,888	+		ABZR86_RS12740	0.43	-0.4
2,854,889	-		ABZR86_RS12740	0.43	+0.2
2,854,889	-		ABZR86_RS12740	0.43	-0.2
2,854,889	-		ABZR86_RS12740	0.43	-0.3
2,854,889	-		ABZR86_RS12740	0.43	-1.0
2,854,889	-		ABZR86_RS12740	0.43	+0.7
2,854,889	-		ABZR86_RS12740	0.43	-0.9
2,854,889	-		ABZR86_RS12740	0.43	-0.1
2,854,889	-		ABZR86_RS12740	0.43	+0.4
2,854,889	-		ABZR86_RS12740	0.43	-0.1
2,854,889	-		ABZR86_RS12740	0.43	+0.2
2,854,963	+		ABZR86_RS12740	0.48	-0.7
2,854,963	+		ABZR86_RS12740	0.48	-1.1
2,854,963	+		ABZR86_RS12740	0.48	-0.9
2,854,963	+		ABZR86_RS12740	0.48	-0.1
2,854,963	+		ABZR86_RS12740	0.48	-1.7
2,854,963	+		ABZR86_RS12740	0.48	-0.2
2,854,963	+		ABZR86_RS12740	0.48	-1.9
2,854,964	-		ABZR86_RS12740	0.48	+0.3
2,854,964	-		ABZR86_RS12740	0.48	+0.6
2,854,988	-		ABZR86_RS12740	0.49	-0.8
2,855,125	+		ABZR86_RS12740	0.58	-0.1
2,855,125	+		ABZR86_RS12740	0.58	+0.6
2,855,125	+		ABZR86_RS12740	0.58	+1.6
2,855,125	+		ABZR86_RS12740	0.58	+0.5
2,855,125	+		ABZR86_RS12740	0.58	+0.3
2,855,126	-		ABZR86_RS12740	0.58	-0.3
2,855,182	+		ABZR86_RS12740	0.61	+0.6
2,855,182	+		ABZR86_RS12740	0.61	+0.9
2,855,206	+		ABZR86_RS12740	0.63	+0.7
2,855,206	+		ABZR86_RS12740	0.63	-0.1
2,855,206	+		ABZR86_RS12740	0.63	+0.6
2,855,206	+		ABZR86_RS12740	0.63	+1.1
2,855,206	+		ABZR86_RS12740	0.63	+1.0
2,855,206	+		ABZR86_RS12740	0.63	+0.6
2,855,206	+		ABZR86_RS12740	0.63	-0.3
2,855,207	-		ABZR86_RS12740	0.63	+1.4
2,855,207	-		ABZR86_RS12740	0.63	+0.8
2,855,207	-		ABZR86_RS12740	0.63	-2.2
2,855,207	-		ABZR86_RS12740	0.63	-1.0
2,855,207	-		ABZR86_RS12740	0.63	-0.0
2,855,207	-		ABZR86_RS12740	0.63	-0.1
2,855,263	+		ABZR86_RS12740	0.66	-0.1
2,855,263	+		ABZR86_RS12740	0.66	-0.9
2,855,263	+		ABZR86_RS12740	0.66	-0.1
2,855,263	+		ABZR86_RS12740	0.66	+0.3
2,855,264	-		ABZR86_RS12740	0.66	+0.6
2,855,264	-		ABZR86_RS12740	0.66	-0.0
2,855,264	-		ABZR86_RS12740	0.66	+0.4
2,855,264	-		ABZR86_RS12740	0.66	+1.2
2,855,264	-		ABZR86_RS12740	0.66	+1.0
2,855,264	-		ABZR86_RS12740	0.66	+0.1
2,855,264	-		ABZR86_RS12740	0.66	-1.0