Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS11670

Experiment: Spectinomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.04 mg/ml
2,611,121	+		ABZR86_RS11660	0.57	+0.2
2,611,122	-		ABZR86_RS11660	0.57	+0.1
2,611,122	-		ABZR86_RS11660	0.57	-0.7
2,611,122	-		ABZR86_RS11660	0.57	+0.2
2,611,122	-		ABZR86_RS11660	0.57	+0.3
2,611,122	-		ABZR86_RS11660	0.57	-0.5
2,611,129	+		ABZR86_RS11660	0.59	+0.6
2,611,130	-		ABZR86_RS11660	0.59	-0.5
2,611,130	-		ABZR86_RS11660	0.59	+0.5
2,611,130	-		ABZR86_RS11660	0.59	-0.2
2,611,130	-		ABZR86_RS11660	0.59	-0.1
2,611,130	-		ABZR86_RS11660	0.59	-1.6
2,611,130	-		ABZR86_RS11660	0.59	+0.4
2,611,130	-		ABZR86_RS11660	0.59	-0.3
2,611,262	+				+0.2
2,611,262	+				+0.4
2,611,262	+				+0.8
2,611,263	-				-0.3
2,611,263	-				+0.4
2,611,490	-		ABZR86_RS11665	0.50	-1.1
2,611,490	-		ABZR86_RS11665	0.50	+0.1
2,611,490	-		ABZR86_RS11665	0.50	-1.0
2,611,490	-		ABZR86_RS11665	0.50	-0.3
2,611,523	+		ABZR86_RS11665	0.62	-0.3
2,611,523	+		ABZR86_RS11665	0.62	+0.5
2,611,523	+		ABZR86_RS11665	0.62	-1.3
2,611,523	+		ABZR86_RS11665	0.62	-0.4
2,611,524	-		ABZR86_RS11665	0.62	+0.0
2,611,524	-		ABZR86_RS11665	0.62	-0.0
2,611,683	+				+0.5
2,611,706	+				-0.5
2,611,856	+		ABZR86_RS11670	0.14	+0.6
2,611,856	+		ABZR86_RS11670	0.14	-0.1
2,611,856	+		ABZR86_RS11670	0.14	-0.8
2,611,856	+		ABZR86_RS11670	0.14	-0.9
2,611,857	-		ABZR86_RS11670	0.14	-0.9
2,611,857	-		ABZR86_RS11670	0.14	-0.0
2,611,857	-		ABZR86_RS11670	0.14	-0.4
2,611,905	-		ABZR86_RS11670	0.19	+1.6
2,611,976	+		ABZR86_RS11670	0.28	-0.3
2,612,009	+		ABZR86_RS11670	0.31	-0.6
2,612,010	-		ABZR86_RS11670	0.32	-0.6
2,612,010	-		ABZR86_RS11670	0.32	+0.9
2,612,052	-		ABZR86_RS11670	0.36	+2.0
2,612,084	+		ABZR86_RS11670	0.40	+0.2
2,612,085	-		ABZR86_RS11670	0.40	+0.8
2,612,399	+		ABZR86_RS11670	0.77	+0.1
2,612,400	-		ABZR86_RS11670	0.77	-1.5
2,612,601	-				+0.4
2,612,642	+				+0.4
2,612,662	+				+0.4
2,612,663	-				-0.0
2,612,685	+				+0.1
2,612,686	-				+0.4
2,612,686	-				-0.4
2,612,835	+		ABZR86_RS11675	0.10	-1.1
2,612,836	-		ABZR86_RS11675	0.10	+0.5
2,612,836	-		ABZR86_RS11675	0.10	-0.8
2,612,836	-		ABZR86_RS11675	0.10	-0.0
2,612,836	-		ABZR86_RS11675	0.10	+0.3
2,612,836	-		ABZR86_RS11675	0.10	-0.0
2,612,856	+		ABZR86_RS11675	0.12	-0.1
2,612,856	+		ABZR86_RS11675	0.12	+0.9
2,612,856	+		ABZR86_RS11675	0.12	+0.0
2,612,886	+		ABZR86_RS11675	0.16	+0.1
2,612,886	+		ABZR86_RS11675	0.16	-0.1
2,612,886	+		ABZR86_RS11675	0.16	+0.8
2,612,887	-		ABZR86_RS11675	0.16	-0.4
2,613,132	+		ABZR86_RS11675	0.42	+1.5
2,613,132	+		ABZR86_RS11675	0.42	+0.3
2,613,132	+		ABZR86_RS11675	0.42	-2.0
2,613,132	+		ABZR86_RS11675	0.42	-0.7
2,613,133	-		ABZR86_RS11675	0.42	+0.7
2,613,133	-		ABZR86_RS11675	0.42	-0.5
2,613,133	-		ABZR86_RS11675	0.42	+0.1
2,613,471	+		ABZR86_RS11675	0.79	+0.0
2,613,471	+		ABZR86_RS11675	0.79	-0.3
2,613,471	+		ABZR86_RS11675	0.79	-0.1
2,613,471	+		ABZR86_RS11675	0.79	-1.0
2,613,472	-		ABZR86_RS11675	0.79	+1.0
2,613,472	-		ABZR86_RS11675	0.79	-0.2
2,613,472	-		ABZR86_RS11675	0.79	-0.4
2,613,477	+		ABZR86_RS11675	0.80	+0.3
2,613,477	+		ABZR86_RS11675	0.80	-0.5
2,613,477	+		ABZR86_RS11675	0.80	-0.8
2,613,477	+		ABZR86_RS11675	0.80	+0.2
2,613,477	+		ABZR86_RS11675	0.80	-0.0
2,613,478	-		ABZR86_RS11675	0.80	+0.2
2,613,478	-		ABZR86_RS11675	0.80	+0.4
2,613,478	-		ABZR86_RS11675	0.80	-1.2
2,613,478	-		ABZR86_RS11675	0.80	+0.1
2,613,516	+		ABZR86_RS11675	0.84	-0.8
2,613,516	+		ABZR86_RS11675	0.84	-0.2
2,613,516	+		ABZR86_RS11675	0.84	-0.1
2,613,516	+		ABZR86_RS11675	0.84	-0.9
2,613,517	-		ABZR86_RS11675	0.84	-0.1
2,613,517	-		ABZR86_RS11675	0.84	-0.2
2,613,517	-		ABZR86_RS11675	0.84	-0.8
2,613,517	-		ABZR86_RS11675	0.84	-0.9
2,613,522	+		ABZR86_RS11675	0.85	-1.3
2,613,522	+		ABZR86_RS11675	0.85	-0.4
2,613,523	-		ABZR86_RS11675	0.85	-0.2