Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS09260

Experiment: Spectinomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.04 mg/ml
2,062,540	+		ABZR86_RS09250	0.79	-1.4
2,062,541	-		ABZR86_RS09250	0.79	-0.2
2,062,541	-		ABZR86_RS09250	0.79	-0.3
2,062,615	+				+0.4
2,062,615	+				-0.5
2,062,616	-				+0.8
2,062,733	-				-1.0
2,062,739	+				-0.3
2,062,739	+				-0.4
2,062,739	+				-0.9
2,062,805	+				+0.1
2,062,832	+		ABZR86_RS09255	0.12	-0.6
2,062,833	-		ABZR86_RS09255	0.12	+0.0
2,062,874	+		ABZR86_RS09255	0.18	-0.5
2,062,875	-		ABZR86_RS09255	0.18	+0.4
2,063,019	+		ABZR86_RS09255	0.37	+0.9
2,063,020	-		ABZR86_RS09255	0.37	-0.1
2,063,243	+		ABZR86_RS09255	0.66	+0.1
2,063,297	+		ABZR86_RS09255	0.73	+0.1
2,063,297	+		ABZR86_RS09255	0.73	-0.7
2,063,298	-		ABZR86_RS09255	0.73	+0.5
2,063,298	-		ABZR86_RS09255	0.73	-0.1
2,063,341	+		ABZR86_RS09255	0.79	+1.2
2,063,342	-		ABZR86_RS09255	0.79	-0.4
2,063,342	-		ABZR86_RS09255	0.79	+1.4
2,063,342	-		ABZR86_RS09255	0.79	+0.1
2,063,345	+		ABZR86_RS09255	0.79	-0.1
2,063,345	+		ABZR86_RS09255	0.79	-1.1
2,063,345	+		ABZR86_RS09255	0.79	-1.1
2,063,450	+				-0.1
2,063,454	+				-0.2
2,063,455	-				-0.0
2,063,455	-				-0.1
2,063,649	+		ABZR86_RS09260	0.17	+0.5
2,063,650	-		ABZR86_RS09260	0.17	-0.6
2,063,657	+		ABZR86_RS09260	0.18	-0.4
2,063,710	+		ABZR86_RS09260	0.24	+0.6
2,063,711	-		ABZR86_RS09260	0.24	+1.7
2,063,798	+		ABZR86_RS09260	0.35	+1.0
2,063,799	-		ABZR86_RS09260	0.35	-2.0
2,063,799	-		ABZR86_RS09260	0.35	-0.5
2,063,802	-		ABZR86_RS09260	0.36	-1.6
2,063,878	+		ABZR86_RS09260	0.45	+0.4
2,063,879	-		ABZR86_RS09260	0.45	+0.5
2,063,879	-		ABZR86_RS09260	0.45	-0.0
2,063,879	-		ABZR86_RS09260	0.45	+0.7
2,063,917	+		ABZR86_RS09260	0.50	-0.7
2,063,917	+		ABZR86_RS09260	0.50	-0.1
2,063,917	+		ABZR86_RS09260	0.50	-0.2
2,063,917	+		ABZR86_RS09260	0.50	+0.3
2,063,917	+		ABZR86_RS09260	0.50	-0.3
2,063,917	+		ABZR86_RS09260	0.50	-0.2
2,063,917	+		ABZR86_RS09260	0.50	+1.6
2,063,917	+		ABZR86_RS09260	0.50	+0.3
2,063,918	-		ABZR86_RS09260	0.50	-1.1
2,063,918	-		ABZR86_RS09260	0.50	+0.8
2,063,918	-		ABZR86_RS09260	0.50	-0.1
2,063,919	+		ABZR86_RS09260	0.50	+0.1
2,063,919	+		ABZR86_RS09260	0.50	+0.0
2,063,919	+		ABZR86_RS09260	0.50	+0.6
2,063,920	-		ABZR86_RS09260	0.50	-1.5
2,063,920	-		ABZR86_RS09260	0.50	-1.0
2,063,920	-		ABZR86_RS09260	0.50	-0.1
2,063,920	-		ABZR86_RS09260	0.50	-0.1
2,063,926	+		ABZR86_RS09260	0.51	-0.2
2,063,926	+		ABZR86_RS09260	0.51	+0.2
2,063,926	+		ABZR86_RS09260	0.51	+1.0
2,063,927	-		ABZR86_RS09260	0.51	-0.9
2,063,927	-		ABZR86_RS09260	0.51	-0.1
2,063,971	-		ABZR86_RS09260	0.57	-0.1
2,063,981	-		ABZR86_RS09260	0.58	+0.2
2,064,052	+		ABZR86_RS09260	0.67	-1.0
2,064,100	+		ABZR86_RS09260	0.73	-0.6
2,064,101	-		ABZR86_RS09260	0.73	-0.2
2,064,119	+		ABZR86_RS09260	0.75	+0.5
2,064,120	-		ABZR86_RS09260	0.75	+0.0
2,064,145	+		ABZR86_RS09260	0.78	+0.1
2,064,196	+		ABZR86_RS09260	0.85	+0.4
2,064,196	+		ABZR86_RS09260	0.85	+0.0
2,064,197	-		ABZR86_RS09260	0.85	+1.2
2,064,197	-		ABZR86_RS09260	0.85	-0.3
2,064,200	+		ABZR86_RS09260	0.85	+0.3
2,064,201	-		ABZR86_RS09260	0.85	+0.3
2,064,232	+		ABZR86_RS09260	0.89	-1.2
2,064,233	-		ABZR86_RS09260	0.89	-1.0
2,064,233	-		ABZR86_RS09260	0.89	-0.2
2,064,257	-				+0.1
2,064,309	+				-1.2
2,064,314	+				-0.5
2,064,314	+				+0.3
2,064,314	+				-0.5
2,064,315	-				+0.6
2,064,412	-				-0.5
2,064,431	+				+0.0
2,064,432	-				+0.4
2,064,512	-		ABZR86_RS09265	0.18	+1.3
2,064,512	-		ABZR86_RS09265	0.18	+0.7
2,064,524	+		ABZR86_RS09265	0.20	+0.1
2,064,524	+		ABZR86_RS09265	0.20	-0.8
2,064,524	+		ABZR86_RS09265	0.20	+1.6
2,064,566	+		ABZR86_RS09265	0.25	-0.7
2,064,568	+		ABZR86_RS09265	0.25	-0.0
2,064,568	+		ABZR86_RS09265	0.25	+0.1
2,064,568	+		ABZR86_RS09265	0.25	-0.0
2,064,568	+		ABZR86_RS09265	0.25	+1.8
2,064,568	+		ABZR86_RS09265	0.25	+0.9
2,064,568	+		ABZR86_RS09265	0.25	+0.3
2,064,569	-		ABZR86_RS09265	0.25	+1.3
2,064,569	-		ABZR86_RS09265	0.25	-0.2
2,064,569	-		ABZR86_RS09265	0.25	-0.1
2,064,698	+		ABZR86_RS09265	0.41	-2.4
2,064,698	+		ABZR86_RS09265	0.41	-0.1
2,064,698	+		ABZR86_RS09265	0.41	+1.2
2,064,698	+		ABZR86_RS09265	0.41	-0.1
2,064,699	-		ABZR86_RS09265	0.41	+1.1
2,064,699	-		ABZR86_RS09265	0.41	-0.7
2,064,717	+		ABZR86_RS09265	0.43	-0.1
2,064,717	+		ABZR86_RS09265	0.43	+0.8
2,064,717	+		ABZR86_RS09265	0.43	+0.8
2,064,718	-		ABZR86_RS09265	0.43	-0.4
2,064,718	-		ABZR86_RS09265	0.43	-0.3
2,064,719	+		ABZR86_RS09265	0.43	-0.2
2,064,719	+		ABZR86_RS09265	0.43	+1.5
2,064,719	+		ABZR86_RS09265	0.43	-0.6
2,064,719	+		ABZR86_RS09265	0.43	+0.9
2,064,720	-		ABZR86_RS09265	0.43	-0.8
2,064,770	+		ABZR86_RS09265	0.49	+0.3
2,064,770	+		ABZR86_RS09265	0.49	+0.4
2,064,770	+		ABZR86_RS09265	0.49	+0.1
2,064,771	-		ABZR86_RS09265	0.49	+0.1
2,064,771	-		ABZR86_RS09265	0.49	+0.2
2,064,771	-		ABZR86_RS09265	0.49	-0.3
2,064,980	+		ABZR86_RS09265	0.74	+0.1
2,064,981	-		ABZR86_RS09265	0.75	-0.9
2,064,981	-		ABZR86_RS09265	0.75	+0.5
2,064,981	-		ABZR86_RS09265	0.75	+0.1
2,064,981	-		ABZR86_RS09265	0.75	+0.1
2,064,981	-		ABZR86_RS09265	0.75	+1.2
2,064,981	-		ABZR86_RS09265	0.75	-0.8
2,065,011	+		ABZR86_RS09265	0.78	+0.4
2,065,012	-		ABZR86_RS09265	0.78	+0.9
2,065,146	+				+0.5
2,065,185	+				+0.7
2,065,221	-				+1.0
2,065,224	+				-0.4
2,065,224	+				+0.6
2,065,236	-				-0.1
2,065,269	+				+0.3
2,065,270	-				-1.1