Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS09005

Experiment: Spectinomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.04 mg/ml
2,005,756	+		ABZR86_RS08995	0.25	+0.0
2,005,756	+		ABZR86_RS08995	0.25	-0.0
2,005,757	-		ABZR86_RS08995	0.25	+0.6
2,005,757	-		ABZR86_RS08995	0.25	-0.8
2,005,757	-		ABZR86_RS08995	0.25	+0.3
2,005,757	-		ABZR86_RS08995	0.25	+1.1
2,005,757	-		ABZR86_RS08995	0.25	-0.5
2,005,757	-		ABZR86_RS08995	0.25	-0.6
2,005,919	-		ABZR86_RS08995	0.46	-1.2
2,005,985	-		ABZR86_RS08995	0.54	+2.0
2,005,985	-		ABZR86_RS08995	0.54	+0.1
2,005,985	-		ABZR86_RS08995	0.54	-1.3
2,005,985	-		ABZR86_RS08995	0.54	-0.3
2,006,107	+		ABZR86_RS08995	0.70	+0.5
2,006,107	+		ABZR86_RS08995	0.70	-0.1
2,006,107	+		ABZR86_RS08995	0.70	-0.1
2,006,108	-		ABZR86_RS08995	0.70	-1.9
2,006,108	-		ABZR86_RS08995	0.70	+0.3
2,006,108	-		ABZR86_RS08995	0.70	+0.2
2,006,108	-		ABZR86_RS08995	0.70	+0.2
2,006,108	-		ABZR86_RS08995	0.70	-1.0
2,006,108	-		ABZR86_RS08995	0.70	-1.6
2,006,322	+				-0.4
2,006,322	+				-0.6
2,006,322	+				-0.2
2,006,322	+				+0.4
2,006,322	+				-0.5
2,006,323	-				+0.2
2,006,323	-				+0.6
2,006,323	-				+0.6
2,006,323	-				+0.4
2,006,326	+				-0.5
2,006,326	+				+0.0
2,006,326	+				-0.1
2,006,326	+				-0.3
2,006,326	+				-0.4
2,006,327	-				-1.4
2,006,382	+		ABZR86_RS09000	0.15	+0.6
2,006,382	+		ABZR86_RS09000	0.15	-0.7
2,006,388	+		ABZR86_RS09000	0.16	-0.3
2,006,388	+		ABZR86_RS09000	0.16	-0.5
2,006,389	-		ABZR86_RS09000	0.17	-0.1
2,006,389	-		ABZR86_RS09000	0.17	+1.5
2,006,389	-		ABZR86_RS09000	0.17	+0.5
2,006,389	-		ABZR86_RS09000	0.17	+0.3
2,006,418	+		ABZR86_RS09000	0.25	-1.7
2,006,419	-		ABZR86_RS09000	0.26	-0.4
2,006,479	+		ABZR86_RS09000	0.43	-0.9
2,006,480	-		ABZR86_RS09000	0.44	+0.6
2,006,738	+				+0.1
2,006,738	+				+1.0
2,006,738	+				-2.3
2,006,739	-				+0.0
2,006,813	+		ABZR86_RS09005	0.16	+0.5
2,006,835	-		ABZR86_RS09005	0.18	-0.9
2,006,835	-		ABZR86_RS09005	0.18	+0.2
2,006,835	-		ABZR86_RS09005	0.18	+0.1
2,006,835	-		ABZR86_RS09005	0.18	-1.0
2,006,877	+		ABZR86_RS09005	0.22	+0.7
2,006,918	+		ABZR86_RS09005	0.27	-0.6
2,006,918	+		ABZR86_RS09005	0.27	-0.3
2,006,919	-		ABZR86_RS09005	0.27	-0.0
2,006,919	-		ABZR86_RS09005	0.27	+1.5
2,006,967	-		ABZR86_RS09005	0.32	+0.1
2,007,230	+		ABZR86_RS09005	0.59	+0.5
2,007,230	+		ABZR86_RS09005	0.59	-1.0
2,007,230	+		ABZR86_RS09005	0.59	+0.3
2,007,231	-		ABZR86_RS09005	0.60	+0.7
2,007,231	-		ABZR86_RS09005	0.60	+0.4
2,007,705	-				-1.0
2,007,749	+				+0.1
2,007,749	+				+1.2
2,007,749	+				-0.5
2,007,749	+				+2.0
2,007,750	-				-0.7
2,007,750	-				-0.1
2,007,838	+		ABZR86_RS09010	0.14	-1.0
2,007,839	-		ABZR86_RS09010	0.14	-0.6
2,007,853	+		ABZR86_RS09010	0.16	+0.6
2,007,854	-		ABZR86_RS09010	0.16	+1.6
2,007,905	+		ABZR86_RS09010	0.25	-0.6
2,007,905	+		ABZR86_RS09010	0.25	-0.1
2,007,935	-		ABZR86_RS09010	0.31	-0.6
2,007,993	+		ABZR86_RS09010	0.41	-0.4
2,007,993	+		ABZR86_RS09010	0.41	-1.2
2,007,993	+		ABZR86_RS09010	0.41	-0.6
2,007,994	-		ABZR86_RS09010	0.41	-0.2
2,007,994	-		ABZR86_RS09010	0.41	+0.2
2,007,994	-		ABZR86_RS09010	0.41	-0.6
2,008,000	+		ABZR86_RS09010	0.42	-0.2
2,008,001	-		ABZR86_RS09010	0.42	+0.3
2,008,001	-		ABZR86_RS09010	0.42	+0.1
2,008,001	-		ABZR86_RS09010	0.42	-1.0
2,008,202	-		ABZR86_RS09010	0.77	+0.0
2,008,202	-		ABZR86_RS09010	0.77	-0.8
2,008,202	-		ABZR86_RS09010	0.77	-0.7
2,008,202	-		ABZR86_RS09010	0.77	+0.1
2,008,344	+				+0.2
2,008,344	+				-0.9
2,008,345	-				-0.5