Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS06485

Experiment: Spectinomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.04 mg/ml
1,437,634	+		ABZR86_RS06480	0.42	+0.2
1,437,634	+		ABZR86_RS06480	0.42	-1.9
1,437,635	-		ABZR86_RS06480	0.42	-1.3
1,437,670	+		ABZR86_RS06480	0.44	-0.2
1,437,671	-		ABZR86_RS06480	0.44	-0.3
1,437,671	-		ABZR86_RS06480	0.44	+0.3
1,437,753	+		ABZR86_RS06480	0.49	-0.4
1,437,854	+		ABZR86_RS06480	0.55	-0.9
1,437,855	-		ABZR86_RS06480	0.55	-0.5
1,437,870	-		ABZR86_RS06480	0.56	-0.6
1,437,917	+		ABZR86_RS06480	0.59	+1.2
1,437,933	+		ABZR86_RS06480	0.60	-0.3
1,438,042	+		ABZR86_RS06480	0.66	-0.0
1,438,043	-		ABZR86_RS06480	0.66	-0.0
1,438,043	-		ABZR86_RS06480	0.66	-0.0
1,438,043	-		ABZR86_RS06480	0.66	-0.3
1,438,098	+		ABZR86_RS06480	0.69	-0.1
1,438,098	+		ABZR86_RS06480	0.69	-1.8
1,438,098	+		ABZR86_RS06480	0.69	-0.7
1,438,099	-		ABZR86_RS06480	0.69	-0.0
1,438,099	-		ABZR86_RS06480	0.69	-0.3
1,438,099	-		ABZR86_RS06480	0.69	+0.4
1,438,099	-		ABZR86_RS06480	0.69	+0.4
1,438,099	-		ABZR86_RS06480	0.69	-1.7
1,438,175	+		ABZR86_RS06480	0.74	+0.2
1,438,175	+		ABZR86_RS06480	0.74	-0.4
1,438,176	-		ABZR86_RS06480	0.74	+1.2
1,438,176	-		ABZR86_RS06480	0.74	-1.1
1,438,176	-		ABZR86_RS06480	0.74	+0.3
1,438,198	+		ABZR86_RS06480	0.75	-0.9
1,438,198	+		ABZR86_RS06480	0.75	-0.1
1,438,198	+		ABZR86_RS06480	0.75	-0.1
1,438,199	-		ABZR86_RS06480	0.75	-0.1
1,438,199	-		ABZR86_RS06480	0.75	-0.8
1,438,199	-		ABZR86_RS06480	0.75	-0.9
1,438,207	+		ABZR86_RS06480	0.76	-0.8
1,438,207	+		ABZR86_RS06480	0.76	+0.7
1,438,208	-		ABZR86_RS06480	0.76	-0.9
1,438,208	-		ABZR86_RS06480	0.76	-0.6
1,438,378	+		ABZR86_RS06480	0.86	-0.3
1,438,400	-		ABZR86_RS06480	0.87	+0.6
1,438,538	+				-0.2
1,438,538	+				-0.4
1,438,538	+				-0.1
1,438,538	+				+0.4
1,438,539	-				+0.8
1,438,539	-				+0.2
1,438,539	-				-0.7
1,438,539	-				+1.8
1,438,539	-				+0.1
1,438,587	+				+0.5
1,438,617	+				+0.1
1,438,637	+				-0.1
1,438,638	-				+0.1
1,438,638	-				-0.9
1,438,638	-				+0.9
1,438,644	+				+1.5
1,438,645	-				-1.5
1,438,645	-				-0.3
1,438,673	+				+0.4
1,438,694	+		ABZR86_RS06485	0.13	-0.1
1,438,694	+		ABZR86_RS06485	0.13	+0.0
1,438,695	-		ABZR86_RS06485	0.13	-0.4
1,438,703	+		ABZR86_RS06485	0.14	-0.2
1,438,704	-		ABZR86_RS06485	0.15	+1.6
1,438,720	+		ABZR86_RS06485	0.17	-0.3
1,438,721	-		ABZR86_RS06485	0.18	-0.4
1,438,773	+		ABZR86_RS06485	0.26	-0.8
1,438,783	-		ABZR86_RS06485	0.28	+0.2
1,438,821	+		ABZR86_RS06485	0.35	-0.9
1,438,931	+		ABZR86_RS06485	0.53	+0.7
1,438,932	-		ABZR86_RS06485	0.53	+1.7
1,438,932	-		ABZR86_RS06485	0.53	+0.0
1,438,962	+		ABZR86_RS06485	0.59	-0.1
1,438,962	+		ABZR86_RS06485	0.59	+0.0
1,438,962	+		ABZR86_RS06485	0.59	-0.1
1,438,963	-		ABZR86_RS06485	0.59	-0.7
1,438,963	-		ABZR86_RS06485	0.59	-0.5
1,438,963	-		ABZR86_RS06485	0.59	-0.8
1,438,997	+		ABZR86_RS06485	0.64	+0.9
1,438,997	+		ABZR86_RS06485	0.64	+0.5
1,438,998	-		ABZR86_RS06485	0.65	+1.3
1,439,071	+		ABZR86_RS06485	0.77	-0.8
1,439,071	+		ABZR86_RS06485	0.77	-0.5
1,439,144	+		ABZR86_RS06485	0.89	+0.8
1,439,162	+				+0.1
1,439,162	+				-0.9
1,439,163	-				-0.7
1,439,394	+				+0.7
1,439,395	-				-1.2
1,439,395	-				-1.1
1,439,395	-				+0.4
1,439,404	-				-1.2
1,439,408	+				-1.0
1,439,408	+				+0.3
1,439,408	+				-1.4
1,439,409	-				-0.1
1,439,409	-				+0.3
1,439,409	-				+0.5
1,439,459	+		ABZR86_RS06490	0.10	+1.0
1,439,528	-		ABZR86_RS06490	0.13	+1.0
1,439,568	+		ABZR86_RS06490	0.15	-0.1
1,439,568	+		ABZR86_RS06490	0.15	-0.5
1,439,568	+		ABZR86_RS06490	0.15	-0.4
1,439,569	-		ABZR86_RS06490	0.15	-0.1
1,439,569	-		ABZR86_RS06490	0.15	-0.3
1,439,607	+		ABZR86_RS06490	0.17	+0.2
1,439,608	-		ABZR86_RS06490	0.17	+0.5
1,439,749	-		ABZR86_RS06490	0.22	-0.4
1,439,825	+		ABZR86_RS06490	0.25	+1.9
1,439,825	+		ABZR86_RS06490	0.25	-1.0
1,439,825	+		ABZR86_RS06490	0.25	-0.4
1,439,826	-		ABZR86_RS06490	0.25	-0.1
1,439,826	-		ABZR86_RS06490	0.25	+0.8
1,439,893	+		ABZR86_RS06490	0.28	-0.2
1,439,893	+		ABZR86_RS06490	0.28	-1.3
1,439,894	-		ABZR86_RS06490	0.28	-0.9
1,440,059	+		ABZR86_RS06490	0.35	+0.1
1,440,203	+		ABZR86_RS06490	0.41	+0.7
1,440,203	+		ABZR86_RS06490	0.41	-0.0
1,440,204	-		ABZR86_RS06490	0.41	-0.5
1,440,204	-		ABZR86_RS06490	0.41	-0.1