Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS06380

Experiment: Spectinomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.04 mg/ml
1,418,495	+				-0.6
1,418,495	+				+0.7
1,418,495	+				+1.8
1,418,495	+				+0.5
1,418,495	+				+0.2
1,418,496	-				-1.0
1,418,496	-				+1.7
1,418,496	-				+1.3
1,418,496	-				+0.2
1,418,496	-				-1.6
1,418,496	-				-0.6
1,418,496	-				-0.3
1,418,550	+				-0.3
1,418,550	+				-0.0
1,418,551	-				+0.5
1,418,589	+				-0.5
1,418,589	+				+1.1
1,418,589	+				-3.5
1,418,590	-				-1.0
1,418,604	+				-0.6
1,418,609	+				-0.0
1,418,610	-				-0.1
1,418,644	-				-2.2
1,418,784	+		ABZR86_RS06375	0.20	-1.1
1,418,784	+		ABZR86_RS06375	0.20	+0.3
1,418,784	+		ABZR86_RS06375	0.20	+0.0
1,418,785	-		ABZR86_RS06375	0.20	+0.5
1,418,785	-		ABZR86_RS06375	0.20	-2.0
1,418,785	-		ABZR86_RS06375	0.20	-1.0
1,418,785	-		ABZR86_RS06375	0.20	+0.6
1,418,817	-		ABZR86_RS06375	0.24	-0.6
1,418,927	+		ABZR86_RS06375	0.38	+0.2
1,418,927	+		ABZR86_RS06375	0.38	+0.2
1,418,927	+		ABZR86_RS06375	0.38	+1.0
1,418,928	-		ABZR86_RS06375	0.38	-0.2
1,418,928	-		ABZR86_RS06375	0.38	-0.2
1,418,966	+		ABZR86_RS06375	0.43	-1.0
1,418,966	+		ABZR86_RS06375	0.43	+0.2
1,418,967	-		ABZR86_RS06375	0.43	+0.7
1,418,967	-		ABZR86_RS06375	0.43	-1.0
1,418,988	+		ABZR86_RS06375	0.46	+0.4
1,418,988	+		ABZR86_RS06375	0.46	+0.9
1,418,989	-		ABZR86_RS06375	0.46	+0.3
1,418,989	-		ABZR86_RS06375	0.46	-0.3
1,419,057	+		ABZR86_RS06375	0.55	-0.6
1,419,057	+		ABZR86_RS06375	0.55	-0.3
1,419,171	-		ABZR86_RS06375	0.70	-0.6
1,419,171	-		ABZR86_RS06375	0.70	+0.1
1,419,221	+		ABZR86_RS06375	0.77	+0.6
1,419,222	-		ABZR86_RS06375	0.77	-1.1
1,419,350	-				-0.6
1,419,436	+				-2.0
1,419,436	+				-0.0
1,419,436	+				-0.0
1,419,439	+				-1.1
1,419,439	+				-1.5
1,419,440	-				-0.7
1,419,455	+				+0.2
1,419,670	+		ABZR86_RS06380	0.38	-0.8
1,419,670	+		ABZR86_RS06380	0.38	-0.6
1,419,671	-		ABZR86_RS06380	0.38	-0.0
1,419,671	-		ABZR86_RS06380	0.38	+1.8
1,419,671	-		ABZR86_RS06380	0.38	+0.3
1,419,738	+		ABZR86_RS06380	0.51	-0.7
1,419,738	+		ABZR86_RS06380	0.51	-1.1
1,419,738	+		ABZR86_RS06380	0.51	+0.4
1,419,738	+		ABZR86_RS06380	0.51	+0.6
1,419,739	-		ABZR86_RS06380	0.51	-0.9
1,420,333	+		ABZR86_RS06385	0.23	-0.1
1,420,333	+		ABZR86_RS06385	0.23	+0.3
1,420,334	-		ABZR86_RS06385	0.23	-1.1
1,420,334	-		ABZR86_RS06385	0.23	+0.0
1,420,334	-		ABZR86_RS06385	0.23	-0.5
1,420,396	-		ABZR86_RS06385	0.27	-0.3
1,420,396	-		ABZR86_RS06385	0.27	+0.2
1,420,396	-		ABZR86_RS06385	0.27	+0.3
1,420,428	+		ABZR86_RS06385	0.29	+0.1
1,420,547	+		ABZR86_RS06385	0.37	+0.1
1,420,551	+		ABZR86_RS06385	0.37	+0.4
1,420,551	+		ABZR86_RS06385	0.37	-0.7
1,420,552	-		ABZR86_RS06385	0.37	-1.1
1,420,552	-		ABZR86_RS06385	0.37	+0.9
1,420,552	-		ABZR86_RS06385	0.37	+2.9
1,420,552	-		ABZR86_RS06385	0.37	-0.7
1,420,552	-		ABZR86_RS06385	0.37	+0.5
1,420,552	-		ABZR86_RS06385	0.37	+0.9
1,420,552	-		ABZR86_RS06385	0.37	+1.1
1,420,552	-		ABZR86_RS06385	0.37	-0.0
1,420,620	+		ABZR86_RS06385	0.42	+0.3
1,420,620	+		ABZR86_RS06385	0.42	+0.2
1,420,621	-		ABZR86_RS06385	0.42	+0.3
1,420,645	+		ABZR86_RS06385	0.43	-1.6