Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS05940

Experiment: Spectinomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.04 mg/ml
1,335,386	+				+3.5
1,335,386	+				+0.9
1,335,386	+				-0.0
1,335,386	+				+0.2
1,335,386	+				-0.1
1,335,387	-				+0.4
1,335,387	-				-0.1
1,335,387	-				-0.6
1,335,387	-				+1.4
1,335,387	-				+0.6
1,335,390	+				-2.2
1,335,390	+				-0.7
1,335,390	+				+0.3
1,335,390	+				+0.6
1,335,390	+				-0.0
1,335,390	+				-0.9
1,335,391	-				-0.2
1,335,391	-				+0.6
1,335,442	+				-0.3
1,335,442	+				-1.8
1,335,442	+				+0.1
1,335,442	+				-0.5
1,335,443	-				-0.2
1,335,443	-				+0.3
1,335,443	-				+0.3
1,335,475	+		ABZR86_RS05935	0.10	+0.1
1,335,475	+		ABZR86_RS05935	0.10	+1.7
1,335,475	+		ABZR86_RS05935	0.10	+0.5
1,335,535	+		ABZR86_RS05935	0.20	-0.0
1,335,536	-		ABZR86_RS05935	0.20	-0.4
1,335,536	-		ABZR86_RS05935	0.20	+0.5
1,335,536	-		ABZR86_RS05935	0.20	+0.8
1,335,836	-		ABZR86_RS05935	0.71	-0.1
1,335,838	+		ABZR86_RS05935	0.71	-0.5
1,335,838	+		ABZR86_RS05935	0.71	+0.4
1,335,958	+				-0.5
1,335,958	+				-0.2
1,335,958	+				-0.6
1,335,958	+				+0.2
1,335,958	+				+0.4
1,335,959	-				+0.9
1,335,959	-				+0.3
1,335,959	-				-2.1
1,335,970	+				-1.8
1,335,970	+				+0.0
1,335,970	+				+0.2
1,335,971	-				-0.9
1,335,971	-				+0.1
1,335,971	-				-0.1
1,335,971	-				+1.4
1,335,971	-				-0.2
1,336,164	+		ABZR86_RS05940	0.12	+1.6
1,336,164	+		ABZR86_RS05940	0.12	-0.2
1,336,164	+		ABZR86_RS05940	0.12	+0.3
1,336,164	+		ABZR86_RS05940	0.12	+0.0
1,336,164	+		ABZR86_RS05940	0.12	+0.4
1,336,165	-		ABZR86_RS05940	0.12	+0.1
1,336,165	-		ABZR86_RS05940	0.12	-0.4
1,336,165	-		ABZR86_RS05940	0.12	+0.6
1,336,165	-		ABZR86_RS05940	0.12	-0.6
1,336,165	-		ABZR86_RS05940	0.12	-0.5
1,336,165	-		ABZR86_RS05940	0.12	+0.6
1,336,165	-		ABZR86_RS05940	0.12	+0.1
1,336,165	-		ABZR86_RS05940	0.12	-0.8
1,336,165	-		ABZR86_RS05940	0.12	-0.5
1,336,179	+		ABZR86_RS05940	0.14	+0.9
1,336,179	+		ABZR86_RS05940	0.14	-0.1
1,336,179	+		ABZR86_RS05940	0.14	+1.4
1,336,179	+		ABZR86_RS05940	0.14	+1.0
1,336,179	+		ABZR86_RS05940	0.14	-0.4
1,336,180	-		ABZR86_RS05940	0.14	-0.9
1,336,180	-		ABZR86_RS05940	0.14	-1.0
1,336,180	-		ABZR86_RS05940	0.14	+0.4
1,336,180	-		ABZR86_RS05940	0.14	+1.4
1,336,180	-		ABZR86_RS05940	0.14	+0.2
1,336,180	-		ABZR86_RS05940	0.14	+0.5
1,336,180	-		ABZR86_RS05940	0.14	+0.2
1,336,359	+		ABZR86_RS05940	0.32	-0.6
1,336,360	-		ABZR86_RS05940	0.32	+0.3
1,336,360	-		ABZR86_RS05940	0.32	-0.3
1,336,534	+		ABZR86_RS05940	0.49	+0.5
1,336,535	-		ABZR86_RS05940	0.49	+0.9
1,336,535	-		ABZR86_RS05940	0.49	+0.7
1,336,535	-		ABZR86_RS05940	0.49	+0.9
1,336,535	-		ABZR86_RS05940	0.49	-0.3
1,336,535	-		ABZR86_RS05940	0.49	-0.5
1,336,553	+		ABZR86_RS05940	0.51	-0.1
1,336,554	-		ABZR86_RS05940	0.51	+0.1
1,336,973	-				+0.8
1,336,981	+				+0.8
1,336,981	+				+0.6
1,336,981	+				-0.2
1,336,981	+				-0.3
1,336,982	-				-1.3
1,336,982	-				+0.4
1,337,040	+				+0.9
1,337,040	+				+0.5
1,337,040	+				-0.0
1,337,040	+				-0.7
1,337,040	+				-0.1
1,337,040	+				-0.4
1,337,040	+				+0.4
1,337,041	-				-0.6
1,337,041	-				+0.7
1,337,041	-				+0.7
1,337,041	-				-0.2
1,337,085	+				-0.6
1,337,085	+				-0.2
1,337,085	+				-0.1
1,337,085	+				+0.3
1,337,085	+				+0.4
1,337,086	-				+0.7
1,337,086	-				+1.2
1,337,086	-				+0.4
1,337,086	-				-0.1
1,337,086	-				+0.1
1,337,086	-				-0.7
1,337,127	+				-0.2
1,337,127	+				-0.4
1,337,127	+				-0.6
1,337,128	-				+0.1
1,337,136	+				-0.2
1,337,136	+				-0.2
1,337,136	+				+0.4
1,337,136	+				+0.2
1,337,136	+				+1.1
1,337,137	-				+0.7
1,337,175	+		ABZR86_RS05945	0.13	+0.0
1,337,175	+		ABZR86_RS05945	0.13	-0.3
1,337,175	+		ABZR86_RS05945	0.13	-2.6
1,337,428	+		ABZR86_RS05945	0.82	+0.7
1,337,428	+		ABZR86_RS05945	0.82	-1.4
1,337,428	+		ABZR86_RS05945	0.82	-0.5
1,337,428	+		ABZR86_RS05945	0.82	+0.3
1,337,429	-		ABZR86_RS05945	0.82	-1.2
1,337,429	-		ABZR86_RS05945	0.82	+0.7
1,337,429	-		ABZR86_RS05945	0.82	-0.2
1,337,429	-		ABZR86_RS05945	0.82	-1.1
1,337,512	+				-1.1
1,337,513	-				-0.9
1,337,631	+				-0.7
1,337,631	+				+0.0
1,337,631	+				+0.2
1,337,631	+				-0.3
1,337,631	+				+1.2
1,337,632	-				-0.1
1,337,632	-				-1.0
1,337,632	-				-0.1
1,337,632	-				-0.9
1,337,632	-				+1.5
1,337,632	-				-0.2
1,337,632	-				+0.7
1,337,632	-				-0.7
1,337,632	-				-0.1
1,337,632	-				+1.7