Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS05215

Experiment: Spectinomycin 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.04 mg/ml
1,176,691	+				+0.9
1,176,692	-				-0.2
1,176,713	+				+0.0
1,176,713	+				-0.0
1,176,713	+				+1.3
1,176,713	+				+0.2
1,176,714	-				-0.1
1,176,714	-				+0.3
1,176,714	-				-0.1
1,176,733	-				-0.0
1,176,756	-		ABZR86_RS05205	0.13	-0.0
1,176,759	-		ABZR86_RS05205	0.14	+0.1
1,176,759	-		ABZR86_RS05205	0.14	-0.4
1,176,766	+		ABZR86_RS05205	0.17	-0.0
1,176,767	-		ABZR86_RS05205	0.17	+0.2
1,176,767	-		ABZR86_RS05205	0.17	-0.7
1,176,767	-		ABZR86_RS05205	0.17	+0.7
1,177,042	+				-0.5
1,177,043	-				-0.5
1,177,054	+				-0.4
1,177,183	-		ABZR86_RS05210	0.36	+0.1
1,177,320	+		ABZR86_RS05210	0.64	-1.7
1,177,330	+		ABZR86_RS05210	0.66	-0.8
1,177,401	-		ABZR86_RS05210	0.81	-0.7
1,177,459	+				+1.0
1,177,460	-				+1.1
1,177,621	+				-0.2
1,177,622	-				+0.2
1,177,622	-				+0.4
1,177,622	-				-0.7
1,177,622	-				-1.1
1,177,631	+				-0.9
1,177,632	-				-1.0
1,177,633	+				+0.7
1,177,633	+				+0.3
1,177,633	+				+0.6
1,177,633	+				+1.3
1,177,633	+				-0.9
1,177,633	+				-0.6
1,177,634	-				+0.4
1,177,654	-				-0.4
1,177,660	+				-0.0
1,177,661	-				-0.6
1,177,661	-				-1.4
1,177,662	+				+0.2
1,177,662	+				+0.0
1,177,662	+				+0.2
1,177,662	+				+0.5
1,177,663	-				+1.8
1,177,715	-				+1.1
1,177,837	+		ABZR86_RS05215	0.31	+0.1
1,177,838	-		ABZR86_RS05215	0.31	-0.9
1,177,838	-		ABZR86_RS05215	0.31	+0.1
1,177,838	-		ABZR86_RS05215	0.31	+0.8
1,178,212	+				+0.7
1,178,262	-				-0.8
1,178,262	-				-0.3
1,178,267	-		ABZR86_RS05220	0.10	+1.7
1,178,315	-		ABZR86_RS05220	0.26	-1.1
1,178,315	-		ABZR86_RS05220	0.26	+0.7
1,178,369	-		ABZR86_RS05220	0.43	-0.3
1,178,550	-				+0.6
1,178,584	-		ABZR86_RS05225	0.17	+0.4
1,178,790	+				-0.5
1,178,791	-				-0.2
1,178,792	+				+0.9
1,178,792	+				-1.8
1,178,793	-				+0.4
1,178,798	+				-0.9
1,178,799	-				-0.4
1,178,799	-				-0.3
1,178,799	-				+0.6
1,178,830	+				+0.7
1,178,830	+				-0.1
1,178,863	+				+0.2
1,178,863	+				-0.4
1,179,027	+		ABZR86_RS05230	0.35	-1.2