Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21440 and SM_b21441 are separated by 551 nucleotides SM_b21441 and SM_b21442 are separated by 12 nucleotides SM_b21442 and SM_b21443 are separated by 51 nucleotides SM_b21443 and SM_b21444 are separated by 17 nucleotides
SM_b21440: SM_b21440 - hypothetical protein, at 1,370,059 to 1,370,493
_b21440
SM_b21441: SM_b21441 - inosine-5'-monophosphate dehydrogenase, at 1,371,045 to 1,371,485
_b21441
SM_b21442: SM_b21442 - hypothetical protein, at 1,371,498 to 1,371,947
_b21442
SM_b21443: SM_b21443 - hypothetical protein, at 1,371,999 to 1,372,313
_b21443
SM_b21444: SM_b21444 - osmotic sensory protein, at 1,372,331 to 1,373,074
_b21444
Position (kb) 1371
1372 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1370.073 kb on + strand at 1370.074 kb on - strand at 1370.074 kb on - strand at 1370.111 kb on + strand, within SM_b21440 at 1370.111 kb on + strand, within SM_b21440 at 1370.245 kb on + strand at 1370.245 kb on + strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.246 kb on - strand, within SM_b21440 at 1370.264 kb on + strand, within SM_b21440 at 1370.265 kb on - strand, within SM_b21440 at 1370.392 kb on + strand, within SM_b21440 at 1370.393 kb on - strand, within SM_b21440 at 1370.394 kb on + strand, within SM_b21440 at 1370.395 kb on - strand, within SM_b21440 at 1370.395 kb on - strand, within SM_b21440 at 1370.491 kb on + strand at 1370.492 kb on - strand at 1370.571 kb on + strand at 1370.571 kb on + strand at 1370.693 kb on - strand at 1370.693 kb on - strand at 1370.859 kb on + strand at 1370.972 kb on - strand at 1370.972 kb on - strand at 1371.040 kb on - strand at 1371.040 kb on - strand at 1371.041 kb on + strand at 1371.305 kb on + strand, within SM_b21441 at 1371.306 kb on - strand, within SM_b21441 at 1371.306 kb on - strand, within SM_b21441 at 1371.477 kb on + strand at 1371.847 kb on - strand, within SM_b21442 at 1371.893 kb on + strand, within SM_b21442 at 1371.894 kb on - strand, within SM_b21442 at 1371.911 kb on + strand at 1371.982 kb on - strand at 1372.002 kb on + strand at 1372.002 kb on + strand at 1372.002 kb on + strand at 1372.002 kb on + strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.003 kb on - strand at 1372.134 kb on + strand, within SM_b21443 at 1372.134 kb on + strand, within SM_b21443 at 1372.135 kb on - strand, within SM_b21443 at 1372.358 kb on + strand at 1372.358 kb on + strand at 1372.359 kb on - strand at 1372.424 kb on + strand, within SM_b21444 at 1372.430 kb on + strand, within SM_b21444 at 1372.430 kb on + strand, within SM_b21444 at 1372.431 kb on - strand, within SM_b21444
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 1,370,073 + -0.6 1,370,074 - +0.4 1,370,074 - -0.2 1,370,111 + SM_b21440 0.12 -0.2 1,370,111 + SM_b21440 0.12 +0.3 1,370,245 + +0.7 1,370,245 + SM_b21440 0.43 -0.4 1,370,246 - SM_b21440 0.43 -0.1 1,370,246 - SM_b21440 0.43 +2.7 1,370,246 - SM_b21440 0.43 +2.1 1,370,246 - SM_b21440 0.43 +0.1 1,370,246 - SM_b21440 0.43 -1.7 1,370,246 - SM_b21440 0.43 +0.1 1,370,264 + SM_b21440 0.47 +1.2 1,370,265 - SM_b21440 0.47 -0.1 1,370,392 + SM_b21440 0.77 -1.0 1,370,393 - SM_b21440 0.77 -0.2 1,370,394 + SM_b21440 0.77 -2.0 1,370,395 - SM_b21440 0.77 +0.8 1,370,395 - SM_b21440 0.77 -1.1 1,370,491 + +0.8 1,370,492 - -3.2 1,370,571 + -0.0 1,370,571 + -2.7 1,370,693 - -2.0 1,370,693 - -0.7 1,370,859 + +1.8 1,370,972 - +0.3 1,370,972 - +0.5 1,371,040 - -0.7 1,371,040 - +1.7 1,371,041 + -0.2 1,371,305 + SM_b21441 0.59 -0.9 1,371,306 - SM_b21441 0.59 -2.1 1,371,306 - SM_b21441 0.59 -3.1 1,371,477 + +0.3 1,371,847 - SM_b21442 0.78 -0.2 1,371,893 + SM_b21442 0.88 -0.2 1,371,894 - SM_b21442 0.88 -1.0 1,371,911 + +0.6 1,371,982 - +0.1 1,372,002 + -3.3 1,372,002 + +0.0 1,372,002 + -0.3 1,372,002 + +1.1 1,372,003 - -0.7 1,372,003 - -0.4 1,372,003 - +3.7 1,372,003 - +0.4 1,372,003 - +0.8 1,372,003 - +0.4 1,372,003 - +0.9 1,372,003 - +0.7 1,372,134 + SM_b21443 0.43 +0.2 1,372,134 + SM_b21443 0.43 +0.4 1,372,135 - SM_b21443 0.43 -2.1 1,372,358 + -0.1 1,372,358 + +1.0 1,372,359 - -2.6 1,372,424 + SM_b21444 0.12 +1.3 1,372,430 + SM_b21444 0.13 -1.6 1,372,430 + SM_b21444 0.13 -1.4 1,372,431 - SM_b21444 0.13 +0.5
Or see this region's nucleotide sequence