Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21183 and SM_b21184 are separated by 104 nucleotides SM_b21184 and SM_b21185 are separated by 36 nucleotides
SM_b21183: SM_b21183 - molecular chaperone HtpG, at 930,553 to 932,442
_b21183
SM_b21184: SM_b21184 - acetate kinase, at 932,547 to 933,725
_b21184
SM_b21185: SM_b21185 - succinate-semialdehyde dehydrogenase (NAD(P)+) protein, at 933,762 to 935,237
_b21185
Position (kb) 932
933
934 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 931.620 kb on + strand, within SM_b21183 at 931.652 kb on - strand, within SM_b21183 at 931.652 kb on - strand, within SM_b21183 at 931.674 kb on - strand, within SM_b21183 at 931.705 kb on - strand, within SM_b21183 at 931.706 kb on + strand at 931.707 kb on - strand, within SM_b21183 at 931.896 kb on + strand, within SM_b21183 at 931.897 kb on - strand, within SM_b21183 at 931.897 kb on - strand, within SM_b21183 at 931.949 kb on + strand, within SM_b21183 at 932.045 kb on + strand, within SM_b21183 at 932.046 kb on - strand, within SM_b21183 at 932.046 kb on - strand, within SM_b21183 at 932.289 kb on - strand at 932.357 kb on + strand at 932.842 kb on - strand, within SM_b21184 at 933.030 kb on + strand, within SM_b21184 at 933.031 kb on - strand, within SM_b21184 at 933.051 kb on + strand, within SM_b21184 at 933.051 kb on + strand, within SM_b21184 at 933.051 kb on + strand, within SM_b21184 at 933.052 kb on - strand, within SM_b21184 at 933.099 kb on + strand, within SM_b21184 at 933.099 kb on + strand, within SM_b21184 at 933.099 kb on + strand, within SM_b21184 at 933.100 kb on - strand, within SM_b21184 at 933.100 kb on - strand, within SM_b21184 at 933.100 kb on - strand, within SM_b21184 at 933.100 kb on - strand, within SM_b21184 at 933.101 kb on + strand, within SM_b21184 at 933.101 kb on + strand, within SM_b21184 at 933.314 kb on + strand, within SM_b21184 at 933.314 kb on + strand, within SM_b21184 at 933.314 kb on + strand, within SM_b21184 at 933.524 kb on + strand, within SM_b21184 at 933.699 kb on - strand at 933.741 kb on + strand at 933.741 kb on + strand at 933.741 kb on + strand at 933.784 kb on + strand at 933.785 kb on - strand at 933.799 kb on + strand at 933.799 kb on + strand at 933.800 kb on - strand at 933.800 kb on - strand at 933.891 kb on - strand at 933.979 kb on + strand, within SM_b21185 at 933.979 kb on + strand, within SM_b21185 at 933.979 kb on + strand, within SM_b21185 at 933.980 kb on - strand, within SM_b21185 at 933.980 kb on - strand, within SM_b21185 at 933.987 kb on - strand, within SM_b21185 at 934.095 kb on - strand, within SM_b21185 at 934.170 kb on + strand, within SM_b21185 at 934.327 kb on + strand, within SM_b21185 at 934.327 kb on + strand, within SM_b21185 at 934.328 kb on - strand, within SM_b21185 at 934.588 kb on + strand, within SM_b21185 at 934.589 kb on - strand, within SM_b21185
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 931,620 + SM_b21183 0.56 +0.8 931,652 - SM_b21183 0.58 -0.4 931,652 - SM_b21183 0.58 +0.2 931,674 - SM_b21183 0.59 +0.4 931,705 - SM_b21183 0.61 +0.1 931,706 + +1.6 931,707 - SM_b21183 0.61 -1.4 931,896 + SM_b21183 0.71 -0.2 931,897 - SM_b21183 0.71 -0.3 931,897 - SM_b21183 0.71 -0.3 931,949 + SM_b21183 0.74 +0.1 932,045 + SM_b21183 0.79 -0.4 932,046 - SM_b21183 0.79 -0.7 932,046 - SM_b21183 0.79 +0.1 932,289 - +1.1 932,357 + -0.2 932,842 - SM_b21184 0.25 -0.2 933,030 + SM_b21184 0.41 -1.0 933,031 - SM_b21184 0.41 -2.7 933,051 + SM_b21184 0.43 -1.4 933,051 + SM_b21184 0.43 -0.4 933,051 + SM_b21184 0.43 +0.7 933,052 - SM_b21184 0.43 +0.1 933,099 + SM_b21184 0.47 -1.4 933,099 + SM_b21184 0.47 +0.0 933,099 + SM_b21184 0.47 -1.2 933,100 - SM_b21184 0.47 +1.3 933,100 - SM_b21184 0.47 +0.0 933,100 - SM_b21184 0.47 -0.4 933,100 - SM_b21184 0.47 -0.2 933,101 + SM_b21184 0.47 -1.5 933,101 + SM_b21184 0.47 -0.4 933,314 + SM_b21184 0.65 -1.1 933,314 + SM_b21184 0.65 -0.5 933,314 + SM_b21184 0.65 -0.0 933,524 + SM_b21184 0.83 +0.3 933,699 - +3.1 933,741 + +0.1 933,741 + -0.4 933,741 + -0.5 933,784 + +0.8 933,785 - -0.2 933,799 + +0.1 933,799 + -3.4 933,800 - +0.1 933,800 - +0.8 933,891 - -0.4 933,979 + SM_b21185 0.15 +0.5 933,979 + SM_b21185 0.15 +0.3 933,979 + SM_b21185 0.15 +0.1 933,980 - SM_b21185 0.15 +0.2 933,980 - SM_b21185 0.15 +1.3 933,987 - SM_b21185 0.15 -1.1 934,095 - SM_b21185 0.23 -1.1 934,170 + SM_b21185 0.28 +0.3 934,327 + SM_b21185 0.38 -0.1 934,327 + SM_b21185 0.38 -1.0 934,328 - SM_b21185 0.38 +0.3 934,588 + SM_b21185 0.56 -0.3 934,589 - SM_b21185 0.56 +0.9
Or see this region's nucleotide sequence