Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03468

Experiment: PYE with nitrite 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 2.5 mM
3,632,147	-		CCNA_03467	0.68	-0.5
3,632,174	+		CCNA_03467	0.69	+0.4
3,632,185	+		CCNA_03467	0.70	-0.9
3,632,193	-		CCNA_03467	0.70	+0.3
3,632,193	-		CCNA_03467	0.70	+0.3
3,632,204	-		CCNA_03467	0.71	-0.7
3,632,204	-		CCNA_03467	0.71	-2.0
3,632,204	-		CCNA_03467	0.71	-0.8
3,632,233	+		CCNA_03467	0.72	+0.8
3,632,235	-		CCNA_03467	0.72	-0.2
3,632,235	-		CCNA_03467	0.72	+0.9
3,632,235	-		CCNA_03467	0.72	+1.2
3,632,241	-		CCNA_03467	0.72	+0.1
3,632,241	-		CCNA_03467	0.72	-1.0
3,632,241	-		CCNA_03467	0.72	-0.1
3,632,256	-		CCNA_03467	0.73	+0.6
3,632,269	+		CCNA_03467	0.73	-1.4
3,632,269	+		CCNA_03467	0.73	+0.1
3,632,277	-		CCNA_03467	0.74	+0.7
3,632,277	-		CCNA_03467	0.74	+0.3
3,632,297	+		CCNA_03467	0.74	+0.9
3,632,297	+		CCNA_03467	0.74	+0.5
3,632,306	-		CCNA_03467	0.75	-0.3
3,632,321	+		CCNA_03467	0.75	-0.1
3,632,334	+		CCNA_03467	0.76	-0.2
3,632,334	+		CCNA_03467	0.76	-0.6
3,632,342	-		CCNA_03467	0.76	-0.6
3,632,355	+		CCNA_03467	0.77	-0.1
3,632,355	+		CCNA_03467	0.77	-0.7
3,632,355	+		CCNA_03467	0.77	-0.9
3,632,355	+		CCNA_03467	0.77	-1.3
3,632,355	+		CCNA_03467	0.77	+0.3
3,632,355	+		CCNA_03467	0.77	+1.4
3,632,355	+		CCNA_03467	0.77	-2.0
3,632,355	+		CCNA_03467	0.77	-0.5
3,632,355	+		CCNA_03467	0.77	+0.6
3,632,355	+		CCNA_03467	0.77	+0.3
3,632,363	-		CCNA_03467	0.77	-0.5
3,632,363	-		CCNA_03467	0.77	-1.5
3,632,363	-		CCNA_03467	0.77	+0.2
3,632,363	-		CCNA_03467	0.77	-1.0
3,632,363	-		CCNA_03467	0.77	-0.1
3,632,363	-		CCNA_03467	0.77	+0.1
3,632,363	-		CCNA_03467	0.77	-0.7
3,632,363	-		CCNA_03467	0.77	+0.5
3,632,363	-		CCNA_03467	0.77	-0.1
3,632,385	-		CCNA_03467	0.78	+2.7
3,632,401	+		CCNA_03467	0.79	-0.1
3,632,402	+		CCNA_03467	0.79	-0.7
3,632,409	-		CCNA_03467	0.79	+0.6
3,632,420	+		CCNA_03467	0.79	+0.3
3,632,435	+		CCNA_03467	0.80	+1.4
3,632,435	+		CCNA_03467	0.80	-2.0
3,632,456	+		CCNA_03467	0.81	-1.7
3,632,461	+		CCNA_03467	0.81	+0.3
3,632,461	+		CCNA_03467	0.81	-0.2
3,632,469	-		CCNA_03467	0.81	-0.6
3,632,536	-		CCNA_03467	0.84	+0.6
3,632,561	-		CCNA_03467	0.85	-1.1
3,632,591	+		CCNA_03467	0.86	+1.3
3,632,591	+		CCNA_03467	0.86	-1.2
3,632,627	+		CCNA_03467	0.88	+0.8
3,632,627	+		CCNA_03467	0.88	-1.3
3,632,635	-				+0.3
3,632,644	+		CCNA_03467	0.88	-1.5
3,632,652	-		CCNA_03467	0.89	+0.7
3,632,654	+		CCNA_03467	0.89	-1.4
3,632,662	-		CCNA_03467	0.89	+1.1
3,632,662	-		CCNA_03467	0.89	-1.4
3,632,662	-		CCNA_03467	0.89	+0.1
3,632,662	-		CCNA_03467	0.89	-0.2
3,632,662	-		CCNA_03467	0.89	+1.5
3,632,701	+				-0.6
3,632,736	+				+0.6
3,632,750	+				+0.2
3,632,750	+				-1.0
3,632,783	+				-0.6
3,632,783	+				-2.1
3,632,788	+				+0.3
3,632,791	-				+0.3
3,632,794	+				-0.5
3,632,817	+				-1.9
3,632,825	-				+0.9
3,632,825	-				-0.6
3,632,883	+				-0.8
3,632,888	+				-0.8
3,632,891	-				-1.7
3,632,951	-				+0.3
3,633,016	+				-1.8
3,633,076	-				-2.1
3,633,102	+				-1.4
3,633,102	+				-1.2
3,633,102	+				-1.3
3,633,102	+				+0.3
3,633,102	+				+0.6
3,633,102	+				-0.8
3,633,102	+				-2.4
3,633,107	+				-0.7
3,633,110	-				+0.6
3,633,110	-				-0.6
3,633,110	-				-0.7
3,633,110	-				-0.4
3,633,110	-				+0.9
3,633,110	-				+0.1
3,633,110	-				+1.5
3,633,110	-				-1.2
3,633,110	-				-0.8
3,633,110	-				-0.1
3,633,193	+				+0.5
3,633,193	+				-2.0
3,633,193	+				-1.4
3,633,201	-				-0.4
3,633,201	-				-0.4
3,633,206	-				-0.4
3,633,263	+				+2.1
3,633,320	+				+0.8
3,633,352	+		CCNA_03468	0.12	-1.3
3,633,355	-		CCNA_03468	0.12	+0.1
3,633,355	-		CCNA_03468	0.12	-0.6
3,633,369	+		CCNA_03468	0.13	-0.3
3,633,391	-		CCNA_03468	0.14	-0.1
3,633,391	-		CCNA_03468	0.14	-0.1
3,633,419	-		CCNA_03468	0.15	-1.4
3,633,434	-		CCNA_03468	0.16	-1.1
3,633,456	+		CCNA_03468	0.18	-0.7
3,633,458	+		CCNA_03468	0.18	-2.0
3,633,458	+		CCNA_03468	0.18	-0.6
3,633,466	-		CCNA_03468	0.18	-1.0
3,633,466	-		CCNA_03468	0.18	-0.8
3,633,466	-		CCNA_03468	0.18	+0.8
3,633,466	-		CCNA_03468	0.18	-0.1
3,633,486	-		CCNA_03468	0.19	-0.9
3,633,500	-		CCNA_03468	0.20	+0.5
3,633,505	+		CCNA_03468	0.20	-1.4
3,633,511	+		CCNA_03468	0.21	+1.3
3,633,516	+		CCNA_03468	0.21	+0.9
3,633,521	+		CCNA_03468	0.21	+0.7
3,633,521	+		CCNA_03468	0.21	-0.4
3,633,521	+		CCNA_03468	0.21	-1.2
3,633,521	+		CCNA_03468	0.21	-1.4
3,633,521	+		CCNA_03468	0.21	-0.1
3,633,521	+		CCNA_03468	0.21	-0.5
3,633,521	+		CCNA_03468	0.21	-2.1
3,633,521	+		CCNA_03468	0.21	-1.2
3,633,521	+		CCNA_03468	0.21	-0.8
3,633,524	-		CCNA_03468	0.21	-0.8
3,633,524	-		CCNA_03468	0.21	+0.1
3,633,528	+		CCNA_03468	0.22	-0.3
3,633,529	-		CCNA_03468	0.22	+2.3
3,633,529	-		CCNA_03468	0.22	-1.0
3,633,529	-		CCNA_03468	0.22	-1.7
3,633,529	-		CCNA_03468	0.22	-1.2
3,633,529	-		CCNA_03468	0.22	-1.4
3,633,529	-		CCNA_03468	0.22	-0.6
3,633,529	-		CCNA_03468	0.22	+0.3
3,633,558	+		CCNA_03468	0.23	+0.3
3,633,558	+		CCNA_03468	0.23	-0.2
3,633,558	+		CCNA_03468	0.23	-1.4
3,633,616	-		CCNA_03468	0.26	-0.1
3,633,681	+		CCNA_03468	0.30	-0.9
3,633,821	+		CCNA_03468	0.38	-2.3
3,633,826	+		CCNA_03468	0.38	-2.1
3,633,826	+		CCNA_03468	0.38	+0.8
3,633,826	+		CCNA_03468	0.38	-0.6
3,633,851	+		CCNA_03468	0.40	-0.5
3,633,866	-		CCNA_03468	0.40	+0.3
3,633,925	-		CCNA_03468	0.44	+1.4
3,633,925	-		CCNA_03468	0.44	+1.1
3,633,925	-		CCNA_03468	0.44	+0.3
3,633,932	+		CCNA_03468	0.44	-1.4
3,633,944	-		CCNA_03468	0.45	+0.8
3,633,944	-		CCNA_03468	0.45	-0.3
3,633,993	+		CCNA_03468	0.47	-1.8
3,633,993	-		CCNA_03468	0.47	-1.4
3,634,001	-		CCNA_03468	0.48	-1.1
3,634,028	+		CCNA_03468	0.49	-1.3
3,634,035	+		CCNA_03468	0.50	-1.2
3,634,043	-		CCNA_03468	0.50	-0.8
3,634,043	-		CCNA_03468	0.50	-0.9
3,634,050	+		CCNA_03468	0.51	-0.7
3,634,058	-		CCNA_03468	0.51	-0.6
3,634,060	+		CCNA_03468	0.51	-1.8
3,634,082	+		CCNA_03468	0.52	-1.2
3,634,131	+		CCNA_03468	0.55	-0.7
3,634,150	+		CCNA_03468	0.56	-0.5
3,634,155	-		CCNA_03468	0.57	+0.1
3,634,161	+		CCNA_03468	0.57	-0.9
3,634,210	-		CCNA_03468	0.60	-0.7
3,634,210	-		CCNA_03468	0.60	+1.4
3,634,255	+		CCNA_03468	0.62	-2.3
3,634,260	+		CCNA_03468	0.62	-1.7
3,634,263	-		CCNA_03468	0.63	-0.9
3,634,263	-		CCNA_03468	0.63	+0.4
3,634,298	+		CCNA_03468	0.64	-2.1
3,634,298	+		CCNA_03468	0.64	-0.9
3,634,299	+		CCNA_03468	0.65	+0.3
3,634,307	-		CCNA_03468	0.65	-1.7
3,634,377	+		CCNA_03468	0.69	-0.4
3,634,377	+		CCNA_03468	0.69	-0.8
3,634,385	-		CCNA_03468	0.69	-0.8
3,634,450	-		CCNA_03468	0.73	+0.8
3,634,502	+		CCNA_03468	0.76	-0.2
3,634,502	+		CCNA_03468	0.76	-0.9
3,634,502	+		CCNA_03468	0.76	-1.2
3,634,502	+		CCNA_03468	0.76	+0.1
3,634,567	+		CCNA_03468	0.79	-1.6
3,634,580	-		CCNA_03468	0.80	+0.0
3,634,601	+		CCNA_03468	0.81	-0.3
3,634,601	+		CCNA_03468	0.81	+1.5
3,634,609	-		CCNA_03468	0.82	-0.8
3,634,611	-		CCNA_03468	0.82	+0.6
3,634,645	+		CCNA_03468	0.84	-1.8
3,634,645	+		CCNA_03468	0.84	-0.4
3,634,679	+		CCNA_03468	0.86	-0.8
3,634,715	-		CCNA_03468	0.88	+0.1
3,634,741	+		CCNA_03468	0.89	-0.5
3,634,749	-		CCNA_03468	0.90	+0.8
3,634,749	-		CCNA_03468	0.90	-0.6
3,634,759	+				-0.6
3,634,759	-				+0.6
3,634,759	-				+0.2
3,634,766	-				+1.0
3,634,766	-				+0.1
3,634,789	+				-1.1
3,634,802	-				+0.7
3,634,802	-				+1.0
3,634,816	-				+1.1
3,634,816	-				+1.6
3,634,854	-				+0.7
3,634,895	+				-1.2
3,634,895	+				-0.8
3,634,895	+				-1.4
3,634,895	+				-1.1
3,634,895	+				-1.0
3,634,903	-				+0.9
3,634,903	-				+1.1
3,634,903	-				+1.1
3,634,903	-				+1.1
3,634,903	-				+1.3
3,634,910	-				-0.1
3,634,921	+				-1.1
3,634,921	+				-0.7