Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02432

Experiment: PYE with nitrite 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 2.5 mM
2,572,287	+		CCNA_02431	0.26	+0.6
2,572,292	+		CCNA_02431	0.26	+0.7
2,572,295	-		CCNA_02431	0.27	+1.7
2,572,300	-		CCNA_02431	0.27	+0.9
2,572,300	-		CCNA_02431	0.27	+1.2
2,572,322	+		CCNA_02431	0.29	+0.3
2,572,363	+		CCNA_02431	0.32	+0.5
2,572,364	-		CCNA_02431	0.32	+0.9
2,572,375	+		CCNA_02431	0.33	-0.5
2,572,375	+		CCNA_02431	0.33	+1.7
2,572,375	+		CCNA_02431	0.33	+1.3
2,572,375	+		CCNA_02431	0.33	-0.3
2,572,375	+		CCNA_02431	0.33	+0.3
2,572,375	+		CCNA_02431	0.33	-0.3
2,572,375	+		CCNA_02431	0.33	-0.1
2,572,383	-		CCNA_02431	0.34	+2.0
2,572,383	-		CCNA_02431	0.34	-0.1
2,572,383	-		CCNA_02431	0.34	+0.7
2,572,383	-		CCNA_02431	0.34	+1.2
2,572,383	-		CCNA_02431	0.34	+0.6
2,572,390	+		CCNA_02431	0.34	-0.7
2,572,398	-		CCNA_02431	0.35	-0.1
2,572,398	-		CCNA_02431	0.35	+1.4
2,572,398	-		CCNA_02431	0.35	+1.0
2,572,398	-		CCNA_02431	0.35	+1.5
2,572,398	-		CCNA_02431	0.35	+1.6
2,572,434	+		CCNA_02431	0.38	-0.5
2,572,479	-		CCNA_02431	0.41	+1.3
2,572,489	-		CCNA_02431	0.42	+1.3
2,572,540	-		CCNA_02431	0.46	+1.1
2,572,578	-		CCNA_02431	0.49	+1.5
2,572,605	-		CCNA_02431	0.51	+0.3
2,572,651	+		CCNA_02431	0.54	-2.0
2,572,651	+		CCNA_02431	0.54	-0.8
2,572,659	-		CCNA_02431	0.55	+0.6
2,572,664	-		CCNA_02431	0.55	+0.9
2,572,679	-		CCNA_02431	0.57	+1.6
2,572,752	-		CCNA_02431	0.62	+0.6
2,572,775	+		CCNA_02431	0.64	-2.1
2,572,789	+		CCNA_02431	0.65	+0.6
2,572,797	-		CCNA_02431	0.66	-1.0
2,572,809	+		CCNA_02431	0.67	+0.2
2,572,812	-		CCNA_02431	0.67	+1.0
2,572,812	-		CCNA_02431	0.67	+1.2
2,572,819	+		CCNA_02431	0.67	+1.5
2,572,832	-		CCNA_02431	0.68	+0.7
2,572,858	-		CCNA_02431	0.70	+0.5
2,572,872	-		CCNA_02431	0.72	+1.8
2,572,874	-		CCNA_02431	0.72	+2.6
2,572,912	+		CCNA_02431	0.75	+0.3
2,572,920	-		CCNA_02431	0.75	+1.6
2,572,920	-		CCNA_02431	0.75	+1.4
2,572,920	-		CCNA_02431	0.75	+0.9
2,572,956	+		CCNA_02431	0.78	-3.8
2,572,974	+		CCNA_02431	0.79	-0.5
2,572,984	+		CCNA_02431	0.80	+0.6
2,573,009	-		CCNA_02431	0.82	-0.5
2,573,009	-		CCNA_02431	0.82	+1.5
2,573,017	+		CCNA_02431	0.83	-0.6
2,573,027	+		CCNA_02431	0.84	-0.8
2,573,059	+		CCNA_02431	0.86	-0.4
2,573,106	-		CCNA_02431	0.90	+0.7
2,573,111	+				-1.5
2,573,122	+				-0.5
2,573,130	-				+2.2
2,573,130	-				+1.7
2,573,185	-				+0.2
2,573,197	-				+1.7
2,573,319	+				-0.9
2,573,329	+				-1.5
2,573,349	+				+0.3
2,573,362	+				+1.3
2,573,376	+				+1.2
2,573,381	-				-0.9
2,573,384	-				+0.1
2,573,384	-				-0.4
2,573,384	-				-0.5
2,573,386	+				+0.8
2,573,394	+				+0.9
2,573,395	+				-2.6
2,573,404	+				-1.9
2,573,447	-		CCNA_02432	0.11	-0.8
2,573,490	+		CCNA_02432	0.14	+1.4
2,573,490	+		CCNA_02432	0.14	+0.3
2,573,490	+		CCNA_02432	0.14	+0.7
2,573,498	-		CCNA_02432	0.15	-0.3
2,573,498	-		CCNA_02432	0.15	-1.3
2,573,534	-		CCNA_02432	0.17	-1.5
2,573,564	+		CCNA_02432	0.19	-0.2
2,573,566	+		CCNA_02432	0.19	+0.5
2,573,566	+		CCNA_02432	0.19	-1.3
2,573,566	+		CCNA_02432	0.19	-1.0
2,573,566	+		CCNA_02432	0.19	+0.7
2,573,572	-		CCNA_02432	0.20	-0.1
2,573,574	-		CCNA_02432	0.20	+1.0
2,573,574	-		CCNA_02432	0.20	+1.0
2,573,574	-		CCNA_02432	0.20	+0.3
2,573,574	-		CCNA_02432	0.20	-0.6
2,573,593	-		CCNA_02432	0.21	-0.6
2,573,599	+		CCNA_02432	0.22	-0.9
2,573,606	+		CCNA_02432	0.22	+1.5
2,573,607	-		CCNA_02432	0.22	-1.6
2,573,621	+		CCNA_02432	0.23	+0.7
2,573,638	-		CCNA_02432	0.24	+0.3
2,573,639	-		CCNA_02432	0.24	-0.3
2,573,643	+		CCNA_02432	0.25	+1.4
2,573,643	+		CCNA_02432	0.25	+1.9
2,573,643	+		CCNA_02432	0.25	+0.9
2,573,643	+		CCNA_02432	0.25	-1.1
2,573,651	-		CCNA_02432	0.25	+1.1
2,573,653	+		CCNA_02432	0.25	+0.0
2,573,661	-		CCNA_02432	0.26	-0.4
2,573,684	-		CCNA_02432	0.27	-0.1
2,573,714	+		CCNA_02432	0.29	-0.4
2,573,734	+		CCNA_02432	0.31	-0.3
2,573,759	-		CCNA_02432	0.32	-1.6
2,573,759	-		CCNA_02432	0.32	-1.3
2,573,759	-		CCNA_02432	0.32	-0.0
2,573,759	-		CCNA_02432	0.32	-0.3
2,573,759	-		CCNA_02432	0.32	+1.1
2,573,759	-		CCNA_02432	0.32	-1.3
2,573,797	+		CCNA_02432	0.35	-0.6
2,573,808	+		CCNA_02432	0.36	+1.2
2,573,811	-		CCNA_02432	0.36	-0.9
2,573,859	-		CCNA_02432	0.39	-2.4
2,573,861	+		CCNA_02432	0.39	+0.2
2,573,907	+		CCNA_02432	0.43	+0.3
2,573,917	+		CCNA_02432	0.43	-0.8
2,573,917	+		CCNA_02432	0.43	-0.7
2,573,917	+		CCNA_02432	0.43	-0.2
2,573,917	+		CCNA_02432	0.43	-1.2
2,573,917	+		CCNA_02432	0.43	+0.9
2,573,925	-		CCNA_02432	0.44	-0.7
2,573,925	-		CCNA_02432	0.44	+2.1
2,573,944	+		CCNA_02432	0.45	+1.5
2,573,956	+		CCNA_02432	0.46	-1.5
2,573,956	+		CCNA_02432	0.46	-1.1
2,573,957	-		CCNA_02432	0.46	-1.1
2,573,968	+		CCNA_02432	0.47	-0.3
2,573,978	+		CCNA_02432	0.47	-1.1
2,573,981	-		CCNA_02432	0.48	-0.7
2,573,986	-		CCNA_02432	0.48	-0.3
2,574,023	+		CCNA_02432	0.50	-2.1
2,574,034	+		CCNA_02432	0.51	-0.5
2,574,076	+		CCNA_02432	0.54	-1.4
2,574,076	+		CCNA_02432	0.54	+0.7
2,574,076	+		CCNA_02432	0.54	-1.1
2,574,076	+		CCNA_02432	0.54	-0.6
2,574,076	+		CCNA_02432	0.54	+0.5
2,574,076	+		CCNA_02432	0.54	-0.3
2,574,076	+		CCNA_02432	0.54	-1.3
2,574,076	+		CCNA_02432	0.54	-0.1
2,574,084	-		CCNA_02432	0.55	-1.8
2,574,084	-		CCNA_02432	0.55	-1.0
2,574,084	-		CCNA_02432	0.55	-1.0
2,574,084	-		CCNA_02432	0.55	+0.2
2,574,084	-		CCNA_02432	0.55	-1.4
2,574,084	-		CCNA_02432	0.55	-1.6
2,574,090	+		CCNA_02432	0.55	+1.2
2,574,091	+		CCNA_02432	0.55	-0.7
2,574,091	+		CCNA_02432	0.55	-1.2
2,574,104	-		CCNA_02432	0.56	-0.5
2,574,126	+		CCNA_02432	0.57	-0.9
2,574,134	-		CCNA_02432	0.58	-0.4
2,574,134	-		CCNA_02432	0.58	+1.9
2,574,137	+		CCNA_02432	0.58	-0.5
2,574,145	-		CCNA_02432	0.59	-0.2
2,574,145	-		CCNA_02432	0.59	+1.0
2,574,156	+		CCNA_02432	0.60	-0.1
2,574,164	-		CCNA_02432	0.60	+0.2
2,574,179	-		CCNA_02432	0.61	+1.5
2,574,214	-		CCNA_02432	0.63	+0.6
2,574,241	-		CCNA_02432	0.65	-0.9
2,574,350	+		CCNA_02432	0.73	+1.1
2,574,432	+		CCNA_02432	0.78	-0.5
2,574,445	-		CCNA_02432	0.79	-0.8
2,574,472	+		CCNA_02432	0.81	-0.5
2,574,485	-		CCNA_02432	0.82	-0.6
2,574,485	-		CCNA_02432	0.82	+0.2
2,574,485	-		CCNA_02432	0.82	+1.3
2,574,495	-		CCNA_02432	0.83	-0.1
2,574,499	+		CCNA_02432	0.83	-2.3
2,574,499	+		CCNA_02432	0.83	+0.2
2,574,499	+		CCNA_02432	0.83	-0.9
2,574,502	-		CCNA_02432	0.83	-1.1
2,574,507	-		CCNA_02432	0.83	+0.1
2,574,507	-		CCNA_02432	0.83	-0.9
2,574,507	-		CCNA_02432	0.83	-2.4
2,574,509	+		CCNA_02432	0.84	-1.2
2,574,509	+		CCNA_02432	0.84	+0.3
2,574,509	+		CCNA_02432	0.84	+1.0
2,574,549	-		CCNA_02432	0.86	+1.2
2,574,563	+		CCNA_02432	0.87	-0.8
2,574,566	+		CCNA_02432	0.87	+0.7
2,574,589	+		CCNA_02432	0.89	-0.9
2,574,597	-		CCNA_02432	0.90	-0.0
2,574,615	+				-0.5
2,574,616	-				-0.7
2,574,628	-				+0.6
2,574,643	+				-1.1
2,574,643	+				-0.4
2,574,692	+				+0.0
2,574,695	+				-0.7
2,574,696	-				-0.1
2,574,707	+				-0.5
2,574,868	+				-0.8
2,574,868	+				+0.0
2,574,868	+				-1.8
2,574,876	-				-0.3
2,574,881	-				+0.6
2,574,883	+				-2.2
2,574,883	+				-1.2
2,574,883	+				-0.5
2,574,883	+				-0.8
2,574,888	+				+0.6
2,574,891	-		CCNA_02433	0.11	+0.0
2,574,891	-		CCNA_02433	0.11	+0.7
2,574,891	-		CCNA_02433	0.11	-0.9
2,574,891	-		CCNA_02433	0.11	+0.2
2,574,896	-		CCNA_02433	0.13	+0.4
2,574,907	+		CCNA_02433	0.19	-1.0
2,574,922	-		CCNA_02433	0.27	+0.9
2,574,943	-		CCNA_02433	0.37	+1.4
2,574,945	+		CCNA_02433	0.38	-1.5
2,574,945	+		CCNA_02433	0.38	-0.7
2,574,953	-		CCNA_02433	0.43	+0.4
2,574,964	+		CCNA_02433	0.48	-1.6
2,574,991	+		CCNA_02433	0.62	+0.9
2,574,999	-		CCNA_02433	0.66	-0.6
2,575,072	+				-0.9
2,575,072	+				-0.1
2,575,073	+				-0.2
2,575,080	-				+1.0
2,575,080	-				+0.5
2,575,080	-				+0.8
2,575,080	-				-0.6
2,575,110	+				+0.0
2,575,118	-				-1.3
2,575,222	+				-1.0
2,575,230	-				+1.7
2,575,230	-				-0.8
2,575,230	-				+1.8
2,575,230	-				+0.3
2,575,249	+				-0.7
2,575,278	-				+2.0
2,575,369	-		CCNA_02434	0.27	+1.4
2,575,398	+		CCNA_02434	0.33	-0.1
2,575,418	+		CCNA_02434	0.38	-0.8
2,575,486	+		CCNA_02434	0.53	+0.0
2,575,494	-		CCNA_02434	0.55	+1.6
2,575,494	-		CCNA_02434	0.55	+1.0
2,575,494	-		CCNA_02434	0.55	+1.5
2,575,505	+		CCNA_02434	0.57	-1.4
2,575,623	-		CCNA_02434	0.84	+1.5
2,575,623	-		CCNA_02434	0.84	+0.7
2,575,623	-		CCNA_02434	0.84	+1.6
2,575,647	-		CCNA_02434	0.90	+1.3
2,575,649	-				+0.2
2,575,673	+				+0.5
2,575,680	-				+1.0
2,575,680	-				+1.9
2,575,690	+				-0.7
2,575,701	-				+2.0
2,575,717	+				-2.0