Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS15595

Experiment: Tetracycline 0.024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.024 mg/ml
3,508,619	+				+1.1
3,508,619	+				-1.5
3,508,619	+				-1.2
3,508,619	+				+0.0
3,508,619	+				-0.8
3,508,620	-				-1.0
3,508,620	-				+0.4
3,508,620	-				-0.0
3,508,620	-				-1.3
3,508,620	-				+1.8
3,508,620	-				-0.2
3,508,628	+				-0.2
3,508,628	+				-0.5
3,508,628	+				-0.9
3,508,628	+				-0.7
3,508,629	-				-0.3
3,508,629	-				+0.5
3,508,629	-				+0.2
3,508,629	-				+0.8
3,508,629	-				-0.0
3,508,846	-		ABZR86_RS15590	0.14	-1.2
3,508,846	-		ABZR86_RS15590	0.14	-1.4
3,508,846	-		ABZR86_RS15590	0.14	-1.3
3,508,917	+		ABZR86_RS15590	0.24	-0.3
3,508,917	+		ABZR86_RS15590	0.24	-1.2
3,508,917	+		ABZR86_RS15590	0.24	-0.5
3,508,918	-		ABZR86_RS15590	0.24	-0.6
3,508,918	-		ABZR86_RS15590	0.24	-0.3
3,508,959	+		ABZR86_RS15590	0.29	-0.7
3,508,959	+		ABZR86_RS15590	0.29	+0.6
3,508,959	+		ABZR86_RS15590	0.29	-0.0
3,508,960	-		ABZR86_RS15590	0.30	+0.3
3,508,960	-		ABZR86_RS15590	0.30	+0.9
3,509,013	+		ABZR86_RS15590	0.37	-1.7
3,509,014	-		ABZR86_RS15590	0.37	+0.6
3,509,014	-		ABZR86_RS15590	0.37	-0.2
3,509,014	-		ABZR86_RS15590	0.37	+0.5
3,509,028	+		ABZR86_RS15590	0.39	+0.7
3,509,028	+		ABZR86_RS15590	0.39	+1.2
3,509,028	+		ABZR86_RS15590	0.39	+1.1
3,509,028	+		ABZR86_RS15590	0.39	-0.1
3,509,028	+		ABZR86_RS15590	0.39	+0.9
3,509,028	+		ABZR86_RS15590	0.39	-0.4
3,509,029	-		ABZR86_RS15590	0.39	-0.3
3,509,029	-		ABZR86_RS15590	0.39	-0.1
3,509,029	-		ABZR86_RS15590	0.39	+0.4
3,509,120	+		ABZR86_RS15590	0.51	-1.0
3,509,121	-		ABZR86_RS15590	0.51	-1.5
3,509,121	-		ABZR86_RS15590	0.51	+0.3
3,509,121	-		ABZR86_RS15590	0.51	+0.7
3,509,142	+		ABZR86_RS15590	0.54	-0.6
3,509,142	+		ABZR86_RS15590	0.54	+0.2
3,509,143	-		ABZR86_RS15590	0.54	-0.3
3,509,304	+		ABZR86_RS15590	0.75	+1.1
3,509,304	+		ABZR86_RS15590	0.75	+0.0
3,509,304	+		ABZR86_RS15590	0.75	+0.2
3,509,304	+		ABZR86_RS15590	0.75	-1.1
3,509,305	-		ABZR86_RS15590	0.75	+1.9
3,509,305	-		ABZR86_RS15590	0.75	+0.3
3,509,305	-		ABZR86_RS15590	0.75	+0.2
3,509,305	-		ABZR86_RS15590	0.75	-0.1
3,509,305	-		ABZR86_RS15590	0.75	+0.1
3,509,305	-		ABZR86_RS15590	0.75	-0.1
3,509,472	+				-0.0
3,509,472	+				+2.3
3,509,472	+				+0.3
3,509,472	+				+0.0
3,509,473	-				+0.5
3,509,473	-				+2.7
3,509,473	-				-0.3
3,509,473	-				-0.8
3,509,473	-				-2.5
3,509,473	-				+0.6
3,509,473	-				-0.3
3,509,473	-				+0.2
3,509,473	-				+0.2
3,509,473	-				+0.1
3,509,555	+				-0.5
3,509,555	+				+0.7
3,509,556	-				-0.2
3,509,556	-				+0.2
3,509,556	-				+1.0
3,509,556	-				-3.4
3,509,556	-				+0.1
3,509,603	+				+0.7
3,509,603	+				-2.2
3,509,603	+				-1.0
3,509,618	+		ABZR86_RS15595	0.10	+0.2
3,509,618	+		ABZR86_RS15595	0.10	-1.2
3,509,618	+		ABZR86_RS15595	0.10	-0.6
3,509,619	-		ABZR86_RS15595	0.11	+0.7
3,509,619	-		ABZR86_RS15595	0.11	-1.2
3,509,619	-		ABZR86_RS15595	0.11	+0.4
3,509,619	-		ABZR86_RS15595	0.11	-0.6
3,509,619	-		ABZR86_RS15595	0.11	+0.8
3,509,734	-		ABZR86_RS15595	0.20	-0.3
3,509,734	-		ABZR86_RS15595	0.20	+1.1
3,509,734	-		ABZR86_RS15595	0.20	-0.7
3,509,734	-		ABZR86_RS15595	0.20	+0.5
3,509,734	-		ABZR86_RS15595	0.20	-1.6
3,509,767	+		ABZR86_RS15595	0.23	+0.8
3,509,769	-		ABZR86_RS15595	0.23	+0.3
3,509,769	-		ABZR86_RS15595	0.23	+0.5
3,509,769	-		ABZR86_RS15595	0.23	+0.6
3,509,883	+		ABZR86_RS15595	0.33	-0.0
3,509,948	+		ABZR86_RS15595	0.38	+0.1
3,509,948	+		ABZR86_RS15595	0.38	-0.4
3,509,949	-		ABZR86_RS15595	0.39	-2.2
3,509,949	-		ABZR86_RS15595	0.39	+0.4
3,509,949	-		ABZR86_RS15595	0.39	+0.9
3,509,949	-		ABZR86_RS15595	0.39	-0.3
3,509,949	-		ABZR86_RS15595	0.39	-0.0
3,510,164	+		ABZR86_RS15595	0.57	-0.8
3,510,164	+		ABZR86_RS15595	0.57	+1.8
3,510,164	+		ABZR86_RS15595	0.57	+0.4
3,510,164	+		ABZR86_RS15595	0.57	+1.8
3,510,165	-		ABZR86_RS15595	0.57	+0.4
3,510,165	-		ABZR86_RS15595	0.57	+0.5
3,510,165	-		ABZR86_RS15595	0.57	-0.4
3,510,167	+		ABZR86_RS15595	0.57	+0.4
3,510,167	+		ABZR86_RS15595	0.57	+1.0
3,510,167	+		ABZR86_RS15595	0.57	+0.8
3,510,168	-		ABZR86_RS15595	0.57	+0.2
3,510,168	-		ABZR86_RS15595	0.57	+0.5
3,510,168	-		ABZR86_RS15595	0.57	-1.0
3,510,168	-		ABZR86_RS15595	0.57	+0.1
3,510,168	-		ABZR86_RS15595	0.57	-0.6
3,510,168	-		ABZR86_RS15595	0.57	-0.7
3,510,168	-		ABZR86_RS15595	0.57	+0.2
3,510,168	-		ABZR86_RS15595	0.57	-0.2
3,510,168	-		ABZR86_RS15595	0.57	+0.4
3,510,203	+		ABZR86_RS15595	0.60	-0.1
3,510,203	+		ABZR86_RS15595	0.60	+0.1
3,510,203	+		ABZR86_RS15595	0.60	+1.2
3,510,203	+		ABZR86_RS15595	0.60	+0.5
3,510,203	+		ABZR86_RS15595	0.60	+0.0
3,510,203	+		ABZR86_RS15595	0.60	+0.3
3,510,203	+		ABZR86_RS15595	0.60	+0.4
3,510,203	+		ABZR86_RS15595	0.60	+0.2
3,510,203	+		ABZR86_RS15595	0.60	+0.6
3,510,203	+		ABZR86_RS15595	0.60	-0.0
3,510,204	-		ABZR86_RS15595	0.60	-1.8
3,510,204	-		ABZR86_RS15595	0.60	-0.9
3,510,204	-		ABZR86_RS15595	0.60	+0.7
3,510,326	+		ABZR86_RS15595	0.70	+0.4
3,510,326	+		ABZR86_RS15595	0.70	+0.2
3,510,326	+		ABZR86_RS15595	0.70	+0.4
3,510,327	-		ABZR86_RS15595	0.71	-0.2
3,510,356	+		ABZR86_RS15595	0.73	+0.4
3,510,356	+		ABZR86_RS15595	0.73	+0.1
3,510,356	+		ABZR86_RS15595	0.73	-2.3
3,510,356	+		ABZR86_RS15595	0.73	-0.1
3,510,356	+		ABZR86_RS15595	0.73	-1.1
3,510,356	+		ABZR86_RS15595	0.73	+0.2
3,510,356	+		ABZR86_RS15595	0.73	+0.2
3,510,357	-		ABZR86_RS15595	0.73	+1.1
3,510,357	-		ABZR86_RS15595	0.73	-0.2
3,510,357	-		ABZR86_RS15595	0.73	-0.6
3,510,357	-		ABZR86_RS15595	0.73	+1.0
3,510,357	-		ABZR86_RS15595	0.73	+0.3
3,510,357	-		ABZR86_RS15595	0.73	+1.1
3,510,357	-		ABZR86_RS15595	0.73	-0.3
3,510,425	+		ABZR86_RS15595	0.79	-0.8
3,510,425	+		ABZR86_RS15595	0.79	-0.2
3,510,425	+		ABZR86_RS15595	0.79	+0.0
3,510,425	+		ABZR86_RS15595	0.79	-0.9
3,510,426	-		ABZR86_RS15595	0.79	+0.3
3,510,426	-		ABZR86_RS15595	0.79	+0.2
3,510,426	-		ABZR86_RS15595	0.79	+0.7
3,510,426	-		ABZR86_RS15595	0.79	+0.4
3,510,497	+		ABZR86_RS15595	0.85	-0.6
3,510,498	-		ABZR86_RS15595	0.85	-0.7
3,510,498	-		ABZR86_RS15595	0.85	-1.0
3,510,512	+		ABZR86_RS15595	0.86	-1.2
3,510,513	-		ABZR86_RS15595	0.86	-1.4
3,510,524	+		ABZR86_RS15595	0.87	+1.1
3,510,524	+		ABZR86_RS15595	0.87	-1.0
3,510,524	+		ABZR86_RS15595	0.87	-0.6
3,510,524	+		ABZR86_RS15595	0.87	-0.3
3,510,524	+		ABZR86_RS15595	0.87	-0.3
3,510,524	+		ABZR86_RS15595	0.87	+0.7
3,510,524	+		ABZR86_RS15595	0.87	-0.2
3,510,524	+		ABZR86_RS15595	0.87	-0.6
3,510,524	+		ABZR86_RS15595	0.87	+0.1
3,510,524	+		ABZR86_RS15595	0.87	-0.1
3,510,524	+		ABZR86_RS15595	0.87	+0.4
3,510,524	+		ABZR86_RS15595	0.87	+0.5
3,510,524	+		ABZR86_RS15595	0.87	-0.1
3,510,524	+		ABZR86_RS15595	0.87	-1.4
3,510,525	-		ABZR86_RS15595	0.87	-0.1
3,510,525	-		ABZR86_RS15595	0.87	+0.1
3,510,525	-		ABZR86_RS15595	0.87	-0.1
3,510,525	-		ABZR86_RS15595	0.87	-0.2
3,510,525	-		ABZR86_RS15595	0.87	-0.3
3,510,525	-		ABZR86_RS15595	0.87	-0.6
3,510,525	-		ABZR86_RS15595	0.87	-0.8
3,510,525	-		ABZR86_RS15595	0.87	-0.2
3,510,525	-		ABZR86_RS15595	0.87	-3.0
3,510,525	-		ABZR86_RS15595	0.87	-0.9
3,510,525	-		ABZR86_RS15595	0.87	+0.3
3,510,525	-		ABZR86_RS15595	0.87	+0.0
3,510,533	+		ABZR86_RS15595	0.88	+0.5
3,510,533	+		ABZR86_RS15595	0.88	-0.6
3,510,533	+		ABZR86_RS15595	0.88	+0.1
3,510,534	-		ABZR86_RS15595	0.88	+0.5
3,510,534	-		ABZR86_RS15595	0.88	-0.1
3,510,534	-		ABZR86_RS15595	0.88	-0.4
3,510,534	-		ABZR86_RS15595	0.88	+0.6
3,510,534	-		ABZR86_RS15595	0.88	+0.6
3,510,671	+				+0.2
3,510,671	+				-0.6
3,510,671	+				+0.4
3,510,671	+				+0.5
3,510,671	+				+0.2
3,510,671	+				-0.6
3,510,671	+				+0.1
3,510,671	+				-1.4
3,510,671	+				-0.6
3,510,671	+				-0.6
3,510,671	+				-0.7
3,510,672	-				+0.9
3,510,672	-				-0.1
3,510,672	-				+0.4
3,510,672	-				+0.0
3,510,672	-				+0.7
3,510,672	-				-0.4
3,510,672	-				-1.9
3,510,672	-				-0.5
3,510,672	-				-0.1
3,510,672	-				-0.7
3,510,672	-				+0.2
3,510,672	-				+0.2
3,510,672	-				+0.6
3,510,676	+				+1.1
3,510,676	+				+2.2
3,510,676	+				+0.1
3,510,676	+				+1.0
3,510,676	+				+1.2
3,510,676	+				-1.5
3,510,676	+				+0.1
3,510,676	+				+0.9
3,510,676	+				-0.0
3,510,676	+				+0.0
3,510,676	+				+0.4
3,510,676	+				+0.1
3,510,676	+				-0.9
3,510,676	+				+1.4
3,510,676	+				-0.5
3,510,676	+				-0.8
3,510,676	+				-0.5
3,510,676	+				+1.4
3,510,677	-				+0.4
3,510,677	-				-0.1
3,510,677	-				-0.3
3,510,677	-				+0.6
3,510,677	-				-1.6
3,510,677	-				+0.3
3,510,677	-				-0.4
3,510,677	-				-3.3
3,510,677	-				+0.2
3,510,677	-				+0.5
3,510,677	-				+0.4
3,510,677	-				+0.4
3,510,712	-				+0.1
3,510,976	+		ABZR86_RS15600	0.29	-0.5
3,510,976	+		ABZR86_RS15600	0.29	-0.2
3,510,976	+		ABZR86_RS15600	0.29	+0.0
3,510,976	+		ABZR86_RS15600	0.29	+0.4
3,510,976	+		ABZR86_RS15600	0.29	+0.3
3,510,977	-		ABZR86_RS15600	0.29	+0.4
3,510,977	-		ABZR86_RS15600	0.29	-0.2
3,510,977	-		ABZR86_RS15600	0.29	-0.0
3,510,977	-		ABZR86_RS15600	0.29	+0.7
3,510,977	-		ABZR86_RS15600	0.29	+0.3
3,510,977	-		ABZR86_RS15600	0.29	+0.6
3,511,182	+		ABZR86_RS15600	0.53	+0.8
3,511,182	+		ABZR86_RS15600	0.53	-0.9
3,511,183	-		ABZR86_RS15600	0.53	+0.1
3,511,183	-		ABZR86_RS15600	0.53	+0.5
3,511,183	-		ABZR86_RS15600	0.53	+0.1
3,511,183	-		ABZR86_RS15600	0.53	+0.2
3,511,183	-		ABZR86_RS15600	0.53	-1.5
3,511,249	+		ABZR86_RS15600	0.60	+0.5
3,511,249	+		ABZR86_RS15600	0.60	-0.8
3,511,249	+		ABZR86_RS15600	0.60	+1.0
3,511,249	+		ABZR86_RS15600	0.60	+0.3
3,511,250	-		ABZR86_RS15600	0.61	-0.0
3,511,515	+				+0.3
3,511,515	+				+0.6
3,511,516	-				-0.4
3,511,516	-				+0.6
3,511,553	+				+0.8
3,511,553	+				+0.3
3,511,554	-				-0.3
3,511,554	-				-0.4
3,511,554	-				+0.5
3,511,554	-				-0.0
3,511,554	-				+0.1
3,511,554	-				+0.6
3,511,554	-				-0.1
3,511,596	+				+0.6
3,511,597	-				-0.6
3,511,597	-				-1.4
3,511,597	-				-1.0
3,511,597	-				+1.4
3,511,597	-				+0.5
3,511,597	-				+0.6
3,511,597	-				-1.9
3,511,597	-				+0.5