Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS15220

Experiment: Tetracycline 0.024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.024 mg/ml
3,427,265	+		ABZR86_RS15210	0.84	-0.4
3,427,265	+		ABZR86_RS15210	0.84	+0.8
3,427,265	+		ABZR86_RS15210	0.84	+1.0
3,427,265	+		ABZR86_RS15210	0.84	-0.6
3,427,266	-		ABZR86_RS15210	0.84	+0.1
3,427,266	-		ABZR86_RS15210	0.84	-0.0
3,427,281	-		ABZR86_RS15210	0.85	+0.4
3,427,281	-		ABZR86_RS15210	0.85	+0.2
3,427,332	-		ABZR86_RS15210	0.88	+0.9
3,427,332	-		ABZR86_RS15210	0.88	-1.0
3,427,332	-		ABZR86_RS15210	0.88	-0.7
3,427,332	-		ABZR86_RS15210	0.88	+0.5
3,427,333	+		ABZR86_RS15210	0.88	+1.0
3,427,334	-		ABZR86_RS15210	0.88	-1.8
3,427,334	-		ABZR86_RS15210	0.88	-0.2
3,427,353	-		ABZR86_RS15210	0.89	-1.0
3,427,426	+				+0.2
3,427,427	-				+0.0
3,427,430	+				+0.0
3,427,430	+				+1.3
3,427,430	+				-0.6
3,427,430	+				-0.2
3,427,430	+				+0.7
3,427,430	+				-0.8
3,427,430	+				-0.7
3,427,430	+				-0.5
3,427,430	+				-0.1
3,427,430	+				-0.2
3,427,431	-				+0.4
3,427,431	-				+0.1
3,427,431	-				-0.2
3,427,431	-				+1.0
3,427,431	-				-0.5
3,427,431	-				-0.1
3,427,431	-				+0.6
3,427,431	-				+1.3
3,427,431	-				+0.9
3,427,431	-				+0.1
3,427,431	-				+0.1
3,427,431	-				+0.3
3,427,431	-				+0.5
3,427,433	+				-1.2
3,427,433	+				+0.3
3,427,436	-				-0.1
3,427,469	-				+0.3
3,427,469	-				-0.4
3,427,522	+				-0.3
3,427,814	+				+1.1
3,427,815	-				-1.1
3,427,875	+				+0.2
3,427,875	+				-0.6
3,427,875	+				+0.6
3,427,876	-				+0.6
3,427,876	-				+0.6
3,427,898	+				+0.1
3,427,899	-				+0.5
3,427,899	-				+0.1
3,427,957	+				+0.5
3,427,957	+				-0.2
3,427,958	-				+0.9
3,428,204	-				+1.2
3,428,204	-				+0.3
3,428,252	-		ABZR86_RS15220	0.12	+0.1
3,428,281	+		ABZR86_RS15220	0.13	-0.3
3,428,282	-		ABZR86_RS15220	0.13	+0.1
3,428,282	-		ABZR86_RS15220	0.13	-2.0
3,428,620	+		ABZR86_RS15220	0.28	+0.3
3,428,620	+		ABZR86_RS15220	0.28	+0.7
3,428,621	-		ABZR86_RS15220	0.28	-0.1
3,428,621	-		ABZR86_RS15220	0.28	-0.7
3,428,621	-		ABZR86_RS15220	0.28	-1.2
3,428,621	-		ABZR86_RS15220	0.28	+0.5
3,428,621	-		ABZR86_RS15220	0.28	+0.1
3,428,861	-		ABZR86_RS15220	0.39	+0.1
3,428,930	-		ABZR86_RS15220	0.42	-0.1
3,429,157	+		ABZR86_RS15220	0.53	-0.7
3,429,157	+		ABZR86_RS15220	0.53	-1.4
3,429,157	+		ABZR86_RS15220	0.53	-0.7
3,429,158	-		ABZR86_RS15220	0.53	+0.2
3,429,158	-		ABZR86_RS15220	0.53	-0.4
3,429,158	-		ABZR86_RS15220	0.53	-1.9
3,429,159	+		ABZR86_RS15220	0.53	-0.2
3,429,159	+		ABZR86_RS15220	0.53	-0.5
3,429,160	-		ABZR86_RS15220	0.53	-0.1
3,429,400	+		ABZR86_RS15220	0.64	-0.3
3,429,432	+		ABZR86_RS15220	0.65	+1.8
3,429,613	+		ABZR86_RS15220	0.73	+0.4
3,429,613	+		ABZR86_RS15220	0.73	+0.2
3,429,613	+		ABZR86_RS15220	0.73	+0.1
3,429,613	+		ABZR86_RS15220	0.73	+0.6
3,429,613	+		ABZR86_RS15220	0.73	-0.8
3,429,613	+		ABZR86_RS15220	0.73	-1.5
3,429,613	+		ABZR86_RS15220	0.73	-0.6
3,429,613	+		ABZR86_RS15220	0.73	-0.1
3,429,614	-		ABZR86_RS15220	0.73	+0.7
3,429,614	-		ABZR86_RS15220	0.73	+1.4
3,429,614	-		ABZR86_RS15220	0.73	+0.4
3,429,614	-		ABZR86_RS15220	0.73	-0.1
3,429,614	-		ABZR86_RS15220	0.73	+0.7
3,429,614	-		ABZR86_RS15220	0.73	+0.5
3,429,614	-		ABZR86_RS15220	0.73	+0.9
3,429,614	-		ABZR86_RS15220	0.73	-0.0
3,429,614	-		ABZR86_RS15220	0.73	-1.2
3,429,614	-		ABZR86_RS15220	0.73	+0.0
3,429,614	-		ABZR86_RS15220	0.73	-0.7
3,429,614	-		ABZR86_RS15220	0.73	+0.4
3,429,614	-		ABZR86_RS15220	0.73	+0.0
3,429,703	+		ABZR86_RS15220	0.77	-0.3
3,429,704	-		ABZR86_RS15220	0.77	+1.5
3,429,804	+		ABZR86_RS15220	0.82	-0.2
3,429,804	+		ABZR86_RS15220	0.82	-0.7
3,429,805	-		ABZR86_RS15220	0.82	+0.1
3,429,805	-		ABZR86_RS15220	0.82	-0.9
3,429,805	-		ABZR86_RS15220	0.82	-0.0
3,429,805	-		ABZR86_RS15220	0.82	+0.9
3,429,805	-		ABZR86_RS15220	0.82	+1.7
3,429,871	+		ABZR86_RS15220	0.85	+1.8
3,429,872	-		ABZR86_RS15220	0.85	-0.1
3,429,872	-		ABZR86_RS15220	0.85	-0.3
3,429,986	-		ABZR86_RS15220	0.90	-1.4
3,430,017	+				+1.0
3,430,017	+				+0.0
3,430,018	-				-0.8
3,430,153	+				+0.0
3,430,154	-				+0.6
3,430,154	-				+0.4
3,430,356	+				-0.3
3,430,356	+				+0.1
3,430,356	+				+0.3
3,430,356	+				+0.1
3,430,380	+		ABZR86_RS15225	0.10	-0.3
3,430,380	+		ABZR86_RS15225	0.10	-0.3
3,430,381	-		ABZR86_RS15225	0.10	-1.4
3,430,381	-		ABZR86_RS15225	0.10	-0.8
3,430,381	-		ABZR86_RS15225	0.10	+0.1
3,430,381	-		ABZR86_RS15225	0.10	+0.4
3,430,497	+		ABZR86_RS15225	0.21	+0.4
3,430,498	-		ABZR86_RS15225	0.21	-1.2
3,430,498	-		ABZR86_RS15225	0.21	+0.5
3,430,524	+		ABZR86_RS15225	0.23	+0.5
3,430,524	+		ABZR86_RS15225	0.23	-0.4
3,430,551	+		ABZR86_RS15225	0.26	-0.1
3,430,551	+		ABZR86_RS15225	0.26	-0.1
3,430,648	-		ABZR86_RS15225	0.35	+0.3
3,430,680	-		ABZR86_RS15225	0.38	+0.6
3,430,689	+		ABZR86_RS15225	0.39	+0.2
3,430,690	-		ABZR86_RS15225	0.39	+0.1
3,430,690	-		ABZR86_RS15225	0.39	-0.0
3,430,690	-		ABZR86_RS15225	0.39	-0.3
3,430,690	-		ABZR86_RS15225	0.39	-0.2
3,430,711	-		ABZR86_RS15225	0.41	+0.4
3,430,711	-		ABZR86_RS15225	0.41	-0.3
3,430,845	+		ABZR86_RS15225	0.53	+1.4
3,430,845	+		ABZR86_RS15225	0.53	-0.0
3,430,845	+		ABZR86_RS15225	0.53	-0.8
3,430,845	+		ABZR86_RS15225	0.53	+1.1
3,430,845	+		ABZR86_RS15225	0.53	+0.3
3,430,845	+		ABZR86_RS15225	0.53	+1.0
3,430,846	-		ABZR86_RS15225	0.53	+0.6
3,430,846	-		ABZR86_RS15225	0.53	-0.1
3,430,846	-		ABZR86_RS15225	0.53	-0.0
3,430,846	-		ABZR86_RS15225	0.53	-0.2
3,430,846	-		ABZR86_RS15225	0.53	+0.8
3,430,846	-		ABZR86_RS15225	0.53	-0.7
3,430,846	-		ABZR86_RS15225	0.53	+0.6
3,431,058	+		ABZR86_RS15225	0.73	+0.8
3,431,058	+		ABZR86_RS15225	0.73	+0.2
3,431,058	+		ABZR86_RS15225	0.73	-2.8
3,431,058	+		ABZR86_RS15225	0.73	-0.3
3,431,058	+		ABZR86_RS15225	0.73	+0.6
3,431,059	-		ABZR86_RS15225	0.73	-0.0
3,431,121	+		ABZR86_RS15225	0.79	-0.3
3,431,181	+		ABZR86_RS15225	0.84	-0.1
3,431,181	+		ABZR86_RS15225	0.84	-1.9