Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS12965

Experiment: Tetracycline 0.024 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.024 mg/ml
2,906,275	+				+0.1
2,906,275	+				-0.6
2,906,276	-				-0.5
2,906,276	-				+0.6
2,906,308	+				+0.5
2,906,308	+				-1.2
2,906,308	+				+0.9
2,906,308	+				+1.2
2,906,308	+				-0.4
2,906,309	-				-1.2
2,906,476	+				+0.3
2,906,737	-		ABZR86_RS12960	0.39	+1.6
2,906,737	-		ABZR86_RS12960	0.39	-1.2
2,906,744	+		ABZR86_RS12960	0.42	+0.4
2,906,905	-				-0.4
2,906,990	+				+0.3
2,907,015	+				-1.4
2,907,015	+				-1.1
2,907,016	-				-0.0
2,907,097	+				-0.1
2,907,209	+				+0.8
2,907,262	+				-0.2
2,907,417	+		ABZR86_RS12965	0.14	+0.1
2,907,417	+		ABZR86_RS12965	0.14	-0.3
2,907,418	-		ABZR86_RS12965	0.14	-0.4
2,907,756	+		ABZR86_RS12965	0.41	+0.7
2,907,756	+		ABZR86_RS12965	0.41	+1.0
2,907,756	+		ABZR86_RS12965	0.41	-0.8
2,907,757	-		ABZR86_RS12965	0.41	-0.3
2,907,757	-		ABZR86_RS12965	0.41	-0.1
2,907,757	-		ABZR86_RS12965	0.41	+0.2
2,907,852	+		ABZR86_RS12965	0.49	-0.3
2,907,852	+		ABZR86_RS12965	0.49	-2.1
2,907,852	+		ABZR86_RS12965	0.49	-0.6
2,908,107	+		ABZR86_RS12965	0.70	+1.0
2,908,107	+		ABZR86_RS12965	0.70	+0.6
2,908,108	-		ABZR86_RS12965	0.70	-0.4
2,908,122	+		ABZR86_RS12965	0.71	-0.2
2,908,122	+		ABZR86_RS12965	0.71	-1.2
2,908,123	-		ABZR86_RS12965	0.71	-0.6
2,908,123	-		ABZR86_RS12965	0.71	+0.5
2,908,123	-		ABZR86_RS12965	0.71	+0.5
2,908,123	-		ABZR86_RS12965	0.71	-2.7
2,908,125	+		ABZR86_RS12965	0.71	+0.8
2,908,126	-		ABZR86_RS12965	0.71	+0.4
2,908,152	+		ABZR86_RS12965	0.74	+0.3
2,908,153	-		ABZR86_RS12965	0.74	+0.8
2,908,182	+		ABZR86_RS12965	0.76	+1.0
2,908,252	+		ABZR86_RS12965	0.82	+0.6
2,908,252	+		ABZR86_RS12965	0.82	+0.7
2,908,254	+		ABZR86_RS12965	0.82	+0.2
2,908,255	-		ABZR86_RS12965	0.82	+1.3
2,908,389	+				+0.1
2,908,389	+				+1.4
2,908,389	+				-1.2
2,908,390	-				-0.8
2,908,667	-		ABZR86_RS12970	0.16	+0.8
2,908,747	+		ABZR86_RS12970	0.23	+0.6
2,908,804	+		ABZR86_RS12970	0.28	-0.5
2,908,805	-		ABZR86_RS12970	0.28	-1.6
2,908,805	-		ABZR86_RS12970	0.28	-0.6
2,908,805	-		ABZR86_RS12970	0.28	+0.6
2,908,805	-		ABZR86_RS12970	0.28	+1.1
2,908,853	-		ABZR86_RS12970	0.32	-0.0
2,908,960	+		ABZR86_RS12970	0.41	-0.4
2,908,960	+		ABZR86_RS12970	0.41	-1.1
2,908,961	-		ABZR86_RS12970	0.41	+1.1
2,908,961	-		ABZR86_RS12970	0.41	-0.1
2,908,961	-		ABZR86_RS12970	0.41	+0.4
2,908,964	+		ABZR86_RS12970	0.42	+0.1
2,908,964	+		ABZR86_RS12970	0.42	-0.4
2,908,965	-		ABZR86_RS12970	0.42	+0.9
2,908,965	-		ABZR86_RS12970	0.42	-0.7
2,909,062	+		ABZR86_RS12970	0.50	-0.2
2,909,063	-		ABZR86_RS12970	0.50	-0.0
2,909,063	-		ABZR86_RS12970	0.50	-0.4
2,909,167	+		ABZR86_RS12970	0.59	+0.2
2,909,167	+		ABZR86_RS12970	0.59	+0.4
2,909,167	+		ABZR86_RS12970	0.59	-0.4
2,909,222	-		ABZR86_RS12970	0.64	+0.3
2,909,311	+		ABZR86_RS12970	0.72	+0.5