Experiment: Tetracycline 0.024 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07885 and ABZR86_RS07890 are separated by 49 nucleotides ABZR86_RS07890 and ABZR86_RS07895 are separated by 124 nucleotides
ABZR86_RS07885: ABZR86_RS07885 - cation diffusion facilitator family transporter, at 1,752,782 to 1,753,765
_RS07885
ABZR86_RS07890: ABZR86_RS07890 - MerC domain-containing protein, at 1,753,815 to 1,754,237
_RS07890
ABZR86_RS07895: ABZR86_RS07895 - TonB-dependent receptor, at 1,754,362 to 1,756,362
_RS07895
Position (kb)
1753
1754
1755 Strain fitness (log2 ratio)
-1
0
1
2 at 1753.232 kb on + strand, within ABZR86_RS07885 at 1753.233 kb on - strand, within ABZR86_RS07885 at 1753.233 kb on - strand, within ABZR86_RS07885 at 1753.467 kb on + strand, within ABZR86_RS07885 at 1753.467 kb on + strand, within ABZR86_RS07885 at 1753.467 kb on + strand, within ABZR86_RS07885 at 1753.467 kb on + strand, within ABZR86_RS07885 at 1753.468 kb on - strand, within ABZR86_RS07885 at 1753.468 kb on - strand, within ABZR86_RS07885 at 1753.468 kb on - strand, within ABZR86_RS07885 at 1753.468 kb on - strand, within ABZR86_RS07885 at 1753.468 kb on - strand, within ABZR86_RS07885 at 1753.468 kb on - strand, within ABZR86_RS07885 at 1753.468 kb on - strand, within ABZR86_RS07885 at 1753.776 kb on + strand at 1753.777 kb on - strand at 1753.777 kb on - strand at 1753.777 kb on - strand at 1753.940 kb on - strand, within ABZR86_RS07890 at 1754.250 kb on - strand at 1754.340 kb on + strand at 1754.341 kb on - strand at 1755.025 kb on + strand, within ABZR86_RS07895 at 1755.025 kb on + strand, within ABZR86_RS07895 at 1755.025 kb on + strand, within ABZR86_RS07895 at 1755.025 kb on + strand, within ABZR86_RS07895 at 1755.113 kb on - strand, within ABZR86_RS07895 at 1755.136 kb on + strand, within ABZR86_RS07895 at 1755.148 kb on + strand, within ABZR86_RS07895 at 1755.149 kb on - strand, within ABZR86_RS07895 at 1755.223 kb on + strand, within ABZR86_RS07895 at 1755.224 kb on - strand, within ABZR86_RS07895
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.024 mg/ml remove 1,753,232 + ABZR86_RS07885 0.46 +0.1 1,753,233 - ABZR86_RS07885 0.46 +0.5 1,753,233 - ABZR86_RS07885 0.46 +0.6 1,753,467 + ABZR86_RS07885 0.70 +2.0 1,753,467 + ABZR86_RS07885 0.70 +1.4 1,753,467 + ABZR86_RS07885 0.70 -1.0 1,753,467 + ABZR86_RS07885 0.70 +1.4 1,753,468 - ABZR86_RS07885 0.70 -0.4 1,753,468 - ABZR86_RS07885 0.70 -0.4 1,753,468 - ABZR86_RS07885 0.70 -0.3 1,753,468 - ABZR86_RS07885 0.70 -0.9 1,753,468 - ABZR86_RS07885 0.70 +0.6 1,753,468 - ABZR86_RS07885 0.70 +0.6 1,753,468 - ABZR86_RS07885 0.70 -1.7 1,753,776 + +1.0 1,753,777 - -0.3 1,753,777 - -0.2 1,753,777 - +0.6 1,753,940 - ABZR86_RS07890 0.30 +2.7 1,754,250 - +0.4 1,754,340 + +0.7 1,754,341 - +1.2 1,755,025 + ABZR86_RS07895 0.33 -1.4 1,755,025 + ABZR86_RS07895 0.33 -0.0 1,755,025 + ABZR86_RS07895 0.33 +0.0 1,755,025 + ABZR86_RS07895 0.33 -0.4 1,755,113 - ABZR86_RS07895 0.38 -0.7 1,755,136 + ABZR86_RS07895 0.39 +0.5 1,755,148 + ABZR86_RS07895 0.39 +1.2 1,755,149 - ABZR86_RS07895 0.39 +0.4 1,755,223 + ABZR86_RS07895 0.43 +1.1 1,755,224 - ABZR86_RS07895 0.43 +0.6
Or see this region's nucleotide sequence