Experiment: Tetracycline 0.024 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07450 and ABZR86_RS07455 are separated by 31 nucleotides ABZR86_RS07455 and ABZR86_RS07460 are separated by 3 nucleotides ABZR86_RS07460 and ABZR86_RS07465 are separated by 52 nucleotides
ABZR86_RS07450: ABZR86_RS07450 - quinone-dependent dihydroorotate dehydrogenase, at 1,641,805 to 1,642,842
_RS07450
ABZR86_RS07455: ABZR86_RS07455 - UDP-N-acetylmuramate dehydrogenase, at 1,642,874 to 1,643,902
_RS07455
ABZR86_RS07460: ABZR86_RS07460 - hypothetical protein, at 1,643,906 to 1,644,367
_RS07460
ABZR86_RS07465: ABZR86_RS07465 - Bax inhibitor-1/YccA family protein, at 1,644,420 to 1,645,178
_RS07465
Position (kb) 1642
1643
1644 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1643.901 kb on - strand at 1643.978 kb on + strand, within ABZR86_RS07460 at 1643.978 kb on + strand, within ABZR86_RS07460 at 1643.979 kb on - strand, within ABZR86_RS07460 at 1643.979 kb on - strand, within ABZR86_RS07460 at 1643.979 kb on - strand, within ABZR86_RS07460 at 1643.979 kb on - strand, within ABZR86_RS07460 at 1643.979 kb on - strand, within ABZR86_RS07460 at 1644.041 kb on + strand, within ABZR86_RS07460 at 1644.050 kb on + strand, within ABZR86_RS07460 at 1644.050 kb on + strand, within ABZR86_RS07460 at 1644.051 kb on - strand, within ABZR86_RS07460 at 1644.051 kb on - strand, within ABZR86_RS07460 at 1644.365 kb on + strand at 1644.366 kb on - strand at 1644.460 kb on + strand at 1644.461 kb on - strand at 1644.499 kb on + strand, within ABZR86_RS07465 at 1644.500 kb on - strand, within ABZR86_RS07465 at 1644.511 kb on + strand, within ABZR86_RS07465 at 1644.511 kb on + strand, within ABZR86_RS07465 at 1644.511 kb on + strand, within ABZR86_RS07465 at 1644.512 kb on - strand, within ABZR86_RS07465 at 1644.512 kb on - strand, within ABZR86_RS07465 at 1644.512 kb on - strand, within ABZR86_RS07465 at 1644.682 kb on + strand, within ABZR86_RS07465 at 1644.682 kb on + strand, within ABZR86_RS07465 at 1644.683 kb on - strand, within ABZR86_RS07465 at 1644.760 kb on + strand, within ABZR86_RS07465 at 1644.760 kb on + strand, within ABZR86_RS07465
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.024 mg/ml remove 1,643,901 - +0.6 1,643,978 + ABZR86_RS07460 0.16 -0.9 1,643,978 + ABZR86_RS07460 0.16 -3.6 1,643,979 - ABZR86_RS07460 0.16 +0.3 1,643,979 - ABZR86_RS07460 0.16 -0.2 1,643,979 - ABZR86_RS07460 0.16 +0.0 1,643,979 - ABZR86_RS07460 0.16 -1.0 1,643,979 - ABZR86_RS07460 0.16 +0.2 1,644,041 + ABZR86_RS07460 0.29 +2.5 1,644,050 + ABZR86_RS07460 0.31 -0.4 1,644,050 + ABZR86_RS07460 0.31 -0.3 1,644,051 - ABZR86_RS07460 0.31 -1.1 1,644,051 - ABZR86_RS07460 0.31 -0.0 1,644,365 + -0.5 1,644,366 - +0.9 1,644,460 + -0.5 1,644,461 - -0.5 1,644,499 + ABZR86_RS07465 0.10 -0.4 1,644,500 - ABZR86_RS07465 0.11 -0.9 1,644,511 + ABZR86_RS07465 0.12 -0.5 1,644,511 + ABZR86_RS07465 0.12 -0.4 1,644,511 + ABZR86_RS07465 0.12 -0.4 1,644,512 - ABZR86_RS07465 0.12 -0.9 1,644,512 - ABZR86_RS07465 0.12 -2.0 1,644,512 - ABZR86_RS07465 0.12 -0.8 1,644,682 + ABZR86_RS07465 0.35 -1.7 1,644,682 + ABZR86_RS07465 0.35 -1.2 1,644,683 - ABZR86_RS07465 0.35 +0.6 1,644,760 + ABZR86_RS07465 0.45 +2.0 1,644,760 + ABZR86_RS07465 0.45 +0.6
Or see this region's nucleotide sequence