Experiment: Tetracycline 0.024 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01090 and ABZR86_RS01095 are separated by 207 nucleotides ABZR86_RS01095 and ABZR86_RS01100 are separated by 486 nucleotides
ABZR86_RS01090: ABZR86_RS01090 - enoyl-ACP reductase FabV, at 215,755 to 216,954
_RS01090
ABZR86_RS01095: ABZR86_RS01095 - elongation factor G, at 217,162 to 219,327
_RS01095
ABZR86_RS01100: ABZR86_RS01100 - catalase family peroxidase, at 219,814 to 220,902
_RS01100
Position (kb) 217
218
219
220 Strain fitness (log2 ratio) -2
-1
0
1 at 216.995 kb on + strand at 216.996 kb on - strand at 217.003 kb on + strand at 217.004 kb on - strand at 217.004 kb on - strand at 217.004 kb on - strand at 217.004 kb on - strand at 217.020 kb on + strand at 217.030 kb on + strand at 217.031 kb on - strand at 217.031 kb on - strand at 217.031 kb on - strand at 217.096 kb on + strand at 217.096 kb on + strand at 217.111 kb on + strand at 217.112 kb on - strand at 217.125 kb on - strand at 217.125 kb on - strand at 217.161 kb on + strand at 217.162 kb on - strand at 217.162 kb on - strand at 217.190 kb on - strand at 217.255 kb on + strand at 217.255 kb on + strand at 217.256 kb on - strand at 217.256 kb on - strand at 217.256 kb on - strand at 217.256 kb on - strand at 217.258 kb on + strand at 217.258 kb on + strand at 217.258 kb on + strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.259 kb on - strand at 217.330 kb on + strand at 217.330 kb on + strand at 217.330 kb on + strand at 217.458 kb on + strand, within ABZR86_RS01095 at 217.458 kb on + strand, within ABZR86_RS01095 at 217.459 kb on - strand, within ABZR86_RS01095 at 217.459 kb on - strand, within ABZR86_RS01095 at 217.552 kb on + strand, within ABZR86_RS01095 at 217.553 kb on - strand, within ABZR86_RS01095 at 217.553 kb on - strand, within ABZR86_RS01095 at 217.573 kb on + strand, within ABZR86_RS01095 at 217.573 kb on + strand, within ABZR86_RS01095 at 217.573 kb on + strand, within ABZR86_RS01095 at 217.573 kb on + strand, within ABZR86_RS01095 at 217.573 kb on + strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.574 kb on - strand, within ABZR86_RS01095 at 217.609 kb on - strand, within ABZR86_RS01095 at 217.726 kb on + strand, within ABZR86_RS01095 at 217.727 kb on - strand, within ABZR86_RS01095 at 218.035 kb on + strand, within ABZR86_RS01095 at 218.080 kb on + strand, within ABZR86_RS01095 at 218.080 kb on + strand, within ABZR86_RS01095 at 218.080 kb on + strand, within ABZR86_RS01095 at 218.081 kb on - strand, within ABZR86_RS01095 at 218.081 kb on - strand, within ABZR86_RS01095 at 218.081 kb on - strand, within ABZR86_RS01095 at 218.081 kb on - strand, within ABZR86_RS01095 at 218.236 kb on + strand, within ABZR86_RS01095 at 218.236 kb on + strand, within ABZR86_RS01095 at 218.236 kb on + strand, within ABZR86_RS01095 at 218.527 kb on + strand, within ABZR86_RS01095 at 218.528 kb on - strand, within ABZR86_RS01095 at 218.528 kb on - strand, within ABZR86_RS01095 at 218.725 kb on + strand, within ABZR86_RS01095 at 218.725 kb on + strand, within ABZR86_RS01095 at 218.725 kb on + strand, within ABZR86_RS01095 at 218.725 kb on + strand, within ABZR86_RS01095 at 218.725 kb on + strand, within ABZR86_RS01095 at 218.726 kb on - strand, within ABZR86_RS01095 at 218.726 kb on - strand, within ABZR86_RS01095 at 218.726 kb on - strand, within ABZR86_RS01095 at 218.726 kb on - strand, within ABZR86_RS01095 at 218.855 kb on - strand, within ABZR86_RS01095 at 218.855 kb on - strand, within ABZR86_RS01095 at 218.914 kb on + strand, within ABZR86_RS01095 at 218.956 kb on + strand, within ABZR86_RS01095 at 218.956 kb on + strand, within ABZR86_RS01095 at 218.957 kb on - strand, within ABZR86_RS01095 at 218.957 kb on - strand, within ABZR86_RS01095 at 219.088 kb on + strand, within ABZR86_RS01095 at 219.088 kb on + strand, within ABZR86_RS01095 at 219.205 kb on + strand at 219.205 kb on + strand at 219.206 kb on - strand at 219.268 kb on + strand at 219.269 kb on - strand at 219.269 kb on - strand at 219.325 kb on + strand at 219.325 kb on + strand at 219.326 kb on - strand at 219.326 kb on - strand at 219.326 kb on - strand at 219.326 kb on - strand at 219.326 kb on - strand at 219.326 kb on - strand at 219.448 kb on + strand at 219.448 kb on + strand at 219.448 kb on + strand at 219.449 kb on - strand at 219.499 kb on + strand at 219.499 kb on + strand at 219.499 kb on + strand at 219.500 kb on - strand at 219.500 kb on - strand at 219.500 kb on - strand at 219.500 kb on - strand at 219.500 kb on - strand at 219.500 kb on - strand at 219.503 kb on + strand at 219.503 kb on + strand at 219.554 kb on - strand at 219.662 kb on + strand at 219.662 kb on + strand at 219.662 kb on + strand at 219.662 kb on + strand at 219.663 kb on - strand at 219.663 kb on - strand at 219.663 kb on - strand at 219.746 kb on - strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.753 kb on - strand at 219.753 kb on - strand at 219.753 kb on - strand at 219.753 kb on - strand at 219.878 kb on - strand at 219.925 kb on + strand, within ABZR86_RS01100 at 219.925 kb on + strand, within ABZR86_RS01100 at 219.926 kb on - strand, within ABZR86_RS01100 at 219.926 kb on - strand, within ABZR86_RS01100 at 220.159 kb on + strand, within ABZR86_RS01100 at 220.160 kb on - strand, within ABZR86_RS01100 at 220.160 kb on - strand, within ABZR86_RS01100 at 220.160 kb on - strand, within ABZR86_RS01100 at 220.160 kb on - strand, within ABZR86_RS01100 at 220.206 kb on + strand, within ABZR86_RS01100
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.024 mg/ml remove 216,995 + -0.0 216,996 - -1.2 217,003 + -0.8 217,004 - -1.5 217,004 - -0.2 217,004 - -0.9 217,004 - -1.8 217,020 + -2.3 217,030 + -1.6 217,031 - +0.9 217,031 - -1.7 217,031 - -0.3 217,096 + +0.1 217,096 + -0.4 217,111 + +0.4 217,112 - -0.3 217,125 - -1.5 217,125 - +0.2 217,161 + +0.5 217,162 - +0.9 217,162 - -0.4 217,190 - -0.9 217,255 + +1.2 217,255 + +0.1 217,256 - -0.6 217,256 - +0.7 217,256 - -0.1 217,256 - +0.2 217,258 + -0.5 217,258 + +1.3 217,258 + +0.8 217,259 - -0.7 217,259 - -1.3 217,259 - -0.4 217,259 - +1.0 217,259 - +0.9 217,259 - -0.4 217,259 - +0.9 217,330 + +1.0 217,330 + +1.0 217,330 + +1.1 217,458 + ABZR86_RS01095 0.14 +0.2 217,458 + ABZR86_RS01095 0.14 +0.3 217,459 - ABZR86_RS01095 0.14 -2.7 217,459 - ABZR86_RS01095 0.14 -0.9 217,552 + ABZR86_RS01095 0.18 +0.7 217,553 - ABZR86_RS01095 0.18 -2.4 217,553 - ABZR86_RS01095 0.18 +0.5 217,573 + ABZR86_RS01095 0.19 -0.2 217,573 + ABZR86_RS01095 0.19 -0.9 217,573 + ABZR86_RS01095 0.19 +1.0 217,573 + ABZR86_RS01095 0.19 -0.7 217,573 + ABZR86_RS01095 0.19 +1.0 217,574 - ABZR86_RS01095 0.19 -0.0 217,574 - ABZR86_RS01095 0.19 -1.1 217,574 - ABZR86_RS01095 0.19 +0.7 217,574 - ABZR86_RS01095 0.19 +0.0 217,574 - ABZR86_RS01095 0.19 -0.1 217,574 - ABZR86_RS01095 0.19 +0.0 217,574 - ABZR86_RS01095 0.19 +0.2 217,609 - ABZR86_RS01095 0.21 +1.3 217,726 + ABZR86_RS01095 0.26 +1.2 217,727 - ABZR86_RS01095 0.26 -0.6 218,035 + ABZR86_RS01095 0.40 +0.4 218,080 + ABZR86_RS01095 0.42 -1.1 218,080 + ABZR86_RS01095 0.42 -0.2 218,080 + ABZR86_RS01095 0.42 +1.4 218,081 - ABZR86_RS01095 0.42 +1.7 218,081 - ABZR86_RS01095 0.42 +1.1 218,081 - ABZR86_RS01095 0.42 +0.6 218,081 - ABZR86_RS01095 0.42 +0.8 218,236 + ABZR86_RS01095 0.50 +0.2 218,236 + ABZR86_RS01095 0.50 +0.1 218,236 + ABZR86_RS01095 0.50 -0.6 218,527 + ABZR86_RS01095 0.63 +0.8 218,528 - ABZR86_RS01095 0.63 +0.7 218,528 - ABZR86_RS01095 0.63 +0.0 218,725 + ABZR86_RS01095 0.72 -2.5 218,725 + ABZR86_RS01095 0.72 -1.3 218,725 + ABZR86_RS01095 0.72 -0.1 218,725 + ABZR86_RS01095 0.72 -0.6 218,725 + ABZR86_RS01095 0.72 -0.2 218,726 - ABZR86_RS01095 0.72 -0.6 218,726 - ABZR86_RS01095 0.72 -0.0 218,726 - ABZR86_RS01095 0.72 -0.3 218,726 - ABZR86_RS01095 0.72 -2.3 218,855 - ABZR86_RS01095 0.78 +0.6 218,855 - ABZR86_RS01095 0.78 -0.1 218,914 + ABZR86_RS01095 0.81 -1.1 218,956 + ABZR86_RS01095 0.83 -0.1 218,956 + ABZR86_RS01095 0.83 +0.2 218,957 - ABZR86_RS01095 0.83 +1.0 218,957 - ABZR86_RS01095 0.83 -0.0 219,088 + ABZR86_RS01095 0.89 -0.5 219,088 + ABZR86_RS01095 0.89 +0.4 219,205 + +1.2 219,205 + +0.1 219,206 - -0.7 219,268 + -0.6 219,269 - +0.3 219,269 - -0.6 219,325 + +0.6 219,325 + -1.0 219,326 - -0.7 219,326 - -1.3 219,326 - +0.3 219,326 - -0.7 219,326 - +0.7 219,326 - -0.1 219,448 + +1.2 219,448 + +0.2 219,448 + -0.1 219,449 - -0.7 219,499 + -0.1 219,499 + -0.1 219,499 + -0.2 219,500 - -1.3 219,500 - -0.2 219,500 - -0.2 219,500 - +0.7 219,500 - -0.7 219,500 - -0.3 219,503 + -1.7 219,503 + +1.0 219,554 - -0.7 219,662 + -0.3 219,662 + -0.5 219,662 + +0.6 219,662 + -0.4 219,663 - +0.8 219,663 - +0.0 219,663 - +0.6 219,746 - +0.9 219,752 + -0.0 219,752 + -0.9 219,752 + +0.3 219,752 + +0.4 219,752 + -0.0 219,752 + +1.0 219,752 + -0.4 219,752 + +0.2 219,752 + -0.9 219,752 + -1.2 219,753 - +0.0 219,753 - -1.0 219,753 - -0.2 219,753 - -1.5 219,878 - +0.1 219,925 + ABZR86_RS01100 0.10 +0.4 219,925 + ABZR86_RS01100 0.10 -1.3 219,926 - ABZR86_RS01100 0.10 +0.8 219,926 - ABZR86_RS01100 0.10 +0.9 220,159 + ABZR86_RS01100 0.32 -1.8 220,160 - ABZR86_RS01100 0.32 -0.8 220,160 - ABZR86_RS01100 0.32 -1.1 220,160 - ABZR86_RS01100 0.32 -0.8 220,160 - ABZR86_RS01100 0.32 +1.1 220,206 + ABZR86_RS01100 0.36 -1.6
Or see this region's nucleotide sequence