Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02617

Experiment: PYE with nitrite 1.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with nitrite 1.25 mM
2,764,346	-				+2.1
2,764,352	-				+1.6
2,764,352	-				+1.9
2,764,392	+		CCNA_02616	0.13	-1.1
2,764,463	+		CCNA_02616	0.20	+0.5
2,764,504	+		CCNA_02616	0.24	+2.1
2,764,504	+		CCNA_02616	0.24	-0.9
2,764,504	+		CCNA_02616	0.24	-0.5
2,764,504	+		CCNA_02616	0.24	-1.6
2,764,512	-		CCNA_02616	0.24	+1.8
2,764,512	-		CCNA_02616	0.24	+2.1
2,764,512	-		CCNA_02616	0.24	+2.2
2,764,512	-		CCNA_02616	0.24	+2.0
2,764,512	-		CCNA_02616	0.24	+2.0
2,764,544	-		CCNA_02616	0.27	+1.7
2,764,561	+		CCNA_02616	0.29	+1.1
2,764,576	-		CCNA_02616	0.30	+1.7
2,764,576	-		CCNA_02616	0.30	+2.1
2,764,576	-		CCNA_02616	0.30	+2.0
2,764,595	-		CCNA_02616	0.32	+1.8
2,764,606	-		CCNA_02616	0.33	+2.1
2,764,614	+		CCNA_02616	0.34	-3.3
2,764,614	+		CCNA_02616	0.34	-1.0
2,764,614	+		CCNA_02616	0.34	+1.1
2,764,614	+		CCNA_02616	0.34	-0.6
2,764,622	-		CCNA_02616	0.35	+1.8
2,764,622	-		CCNA_02616	0.35	+1.5
2,764,636	-		CCNA_02616	0.36	+1.8
2,764,688	-				+2.5
2,764,694	-		CCNA_02616	0.41	+1.6
2,764,713	-		CCNA_02616	0.43	+2.3
2,764,715	+		CCNA_02616	0.43	+0.3
2,764,759	+		CCNA_02616	0.47	+0.1
2,764,789	-		CCNA_02616	0.50	+2.3
2,764,820	-		CCNA_02616	0.53	+1.4
2,764,867	-		CCNA_02616	0.57	+1.5
2,764,871	+		CCNA_02616	0.58	+0.6
2,764,871	+		CCNA_02616	0.58	+0.4
2,764,871	+		CCNA_02616	0.58	+0.1
2,764,871	+		CCNA_02616	0.58	-0.2
2,764,876	+		CCNA_02616	0.58	-0.2
2,764,879	-		CCNA_02616	0.59	+1.7
2,764,879	-		CCNA_02616	0.59	+1.2
2,764,892	-		CCNA_02616	0.60	+1.4
2,764,892	-		CCNA_02616	0.60	+1.3
2,764,895	+		CCNA_02616	0.60	-0.1
2,764,902	-		CCNA_02616	0.61	+1.8
2,764,902	-		CCNA_02616	0.61	+1.4
2,764,973	-		CCNA_02616	0.67	+1.2
2,764,973	-		CCNA_02616	0.67	+1.6
2,765,027	+		CCNA_02616	0.72	-1.2
2,765,056	-		CCNA_02616	0.75	+2.0
2,765,104	-		CCNA_02616	0.80	+1.9
2,765,129	+		CCNA_02616	0.82	+1.2
2,765,162	+		CCNA_02616	0.85	+0.3
2,765,167	+		CCNA_02616	0.85	+0.4
2,765,174	-		CCNA_02616	0.86	+1.4
2,765,175	-		CCNA_02616	0.86	+1.7
2,765,184	+		CCNA_02616	0.87	-0.0
2,765,189	+		CCNA_02616	0.87	-1.4
2,765,241	-				+1.6
2,765,259	-				+1.7
2,765,259	-				+1.7
2,765,299	-				+1.5
2,765,299	-				+2.0
2,765,300	+				-0.2
2,765,308	-				+1.5
2,765,318	+				-0.0
2,765,357	+				-0.6
2,765,400	+				-1.0
2,765,410	+				-1.2
2,765,438	-				+1.7
2,765,472	-		CCNA_02617	0.11	+2.1
2,765,490	-		CCNA_02617	0.13	+1.7
2,765,492	-		CCNA_02617	0.13	+2.7
2,765,546	-		CCNA_02617	0.18	+1.7
2,765,562	-		CCNA_02617	0.19	+2.0
2,765,562	-		CCNA_02617	0.19	+1.8
2,765,564	+		CCNA_02617	0.19	-0.9
2,765,572	-		CCNA_02617	0.20	+1.7
2,765,572	-		CCNA_02617	0.20	+1.5
2,765,595	+		CCNA_02617	0.22	+0.3
2,765,595	+		CCNA_02617	0.22	-1.8
2,765,603	-		CCNA_02617	0.23	+1.8
2,765,615	-		CCNA_02617	0.24	+2.0
2,765,617	+		CCNA_02617	0.24	+0.1
2,765,620	-		CCNA_02617	0.24	+1.8
2,765,620	-		CCNA_02617	0.24	+1.9
2,765,625	-		CCNA_02617	0.25	+1.1
2,765,625	-		CCNA_02617	0.25	+1.9
2,765,625	-		CCNA_02617	0.25	+1.9
2,765,640	+		CCNA_02617	0.26	-0.9
2,765,676	-		CCNA_02617	0.29	+2.0
2,765,688	+		CCNA_02617	0.30	+0.1
2,765,719	-		CCNA_02617	0.33	+1.7
2,765,733	-		CCNA_02617	0.34	+1.6
2,765,734	-		CCNA_02617	0.34	+1.1
2,765,779	-		CCNA_02617	0.38	+1.3
2,765,811	-		CCNA_02617	0.41	+2.1
2,765,818	+		CCNA_02617	0.42	-0.5
2,765,821	+		CCNA_02617	0.42	-0.1
2,765,829	-		CCNA_02617	0.43	+1.9
2,765,829	-		CCNA_02617	0.43	+1.6
2,765,929	-		CCNA_02617	0.51	+1.5
2,765,946	-		CCNA_02617	0.53	+1.7
2,765,984	+		CCNA_02617	0.56	+0.8
2,765,992	-		CCNA_02617	0.57	+2.0
2,766,001	-		CCNA_02617	0.58	+1.7
2,766,001	-		CCNA_02617	0.58	+2.3
2,766,082	+		CCNA_02617	0.65	-0.5
2,766,115	+		CCNA_02617	0.68	-0.6
2,766,115	+		CCNA_02617	0.68	-0.8
2,766,115	+		CCNA_02617	0.68	-1.0
2,766,115	+		CCNA_02617	0.68	-0.4
2,766,123	-		CCNA_02617	0.69	+2.3
2,766,123	-		CCNA_02617	0.69	-0.7
2,766,150	+		CCNA_02617	0.71	-0.7
2,766,158	-		CCNA_02617	0.72	+0.8
2,766,239	+		CCNA_02617	0.79	-0.4
2,766,239	+		CCNA_02617	0.79	-1.4
2,766,239	+		CCNA_02617	0.79	-0.2
2,766,244	+		CCNA_02617	0.79	+1.5
2,766,247	-		CCNA_02617	0.79	+1.6
2,766,247	-		CCNA_02617	0.79	+1.5
2,766,247	-		CCNA_02617	0.79	+1.6
2,766,247	-		CCNA_02617	0.79	+1.6
2,766,247	-		CCNA_02617	0.79	+1.5
2,766,266	+		CCNA_02617	0.81	-1.3
2,766,293	-		CCNA_02617	0.83	+1.8
2,766,322	-		CCNA_02617	0.86	+1.6
2,766,324	+		CCNA_02617	0.86	+0.1
2,766,324	+		CCNA_02617	0.86	+0.1
2,766,332	-		CCNA_02617	0.87	+2.7
2,766,332	-		CCNA_02617	0.87	+2.1
2,766,337	+		CCNA_02617	0.87	+0.8
2,766,343	-		CCNA_02617	0.88	+2.0
2,766,345	-		CCNA_02617	0.88	+1.8
2,766,345	-		CCNA_02617	0.88	+2.3
2,766,345	-		CCNA_02617	0.88	+1.7
2,766,345	-		CCNA_02617	0.88	+2.1
2,766,364	+		CCNA_02617	0.90	-0.5
2,766,369	+				-1.0
2,766,377	-				+2.3
2,766,408	-				+1.7
2,766,427	-				+1.4
2,766,444	-				+1.5
2,766,573	+				-0.4
2,766,721	-		CCNA_02618	0.26	+1.2
2,766,730	-		CCNA_02618	0.28	+0.9
2,766,740	-		CCNA_02618	0.30	+0.5
2,766,809	-		CCNA_02618	0.44	-0.0
2,766,815	+		CCNA_02618	0.46	-1.2
2,766,823	+		CCNA_02618	0.47	-1.9
2,766,843	+		CCNA_02618	0.52	-1.7
2,766,852	+		CCNA_02618	0.54	+0.8
2,766,860	+		CCNA_02618	0.55	-1.8
2,766,865	+		CCNA_02618	0.56	-1.3
2,766,873	-		CCNA_02618	0.58	+0.3
2,766,873	-		CCNA_02618	0.58	+0.4
2,766,873	-		CCNA_02618	0.58	+0.5
2,766,878	-		CCNA_02618	0.59	+1.5
2,766,897	-		CCNA_02618	0.63	+2.8
2,766,924	+		CCNA_02618	0.69	+1.5
2,766,924	+		CCNA_02618	0.69	+0.8
2,766,929	+		CCNA_02618	0.70	+0.5
2,766,932	-		CCNA_02618	0.70	+0.2
2,766,932	-		CCNA_02618	0.70	+0.5
2,766,932	-		CCNA_02618	0.70	+0.8
2,766,937	-		CCNA_02618	0.72	+1.2
2,766,947	+		CCNA_02618	0.74	-1.5
2,766,970	-		CCNA_02618	0.79	+0.9
2,766,970	-		CCNA_02618	0.79	+0.8
2,766,979	+		CCNA_02618	0.80	-1.8
2,766,988	+		CCNA_02618	0.82	-0.4
2,766,998	+		CCNA_02618	0.85	-0.6
2,767,062	-				+0.8
2,767,164	+				+1.5
2,767,172	-				+0.8
2,767,209	+				+1.4
2,767,276	-				+0.8
2,767,282	-				+1.0
2,767,282	-				+1.8
2,767,287	+				+1.3
2,767,295	-				+0.8
2,767,332	-		CCNA_02619	0.14	+0.0
2,767,342	+		CCNA_02619	0.15	+1.8
2,767,346	+		CCNA_02619	0.15	+1.7
2,767,349	-		CCNA_02619	0.16	+1.0
2,767,359	+		CCNA_02619	0.17	+2.2
2,767,364	+		CCNA_02619	0.17	+1.8
2,767,398	-		CCNA_02619	0.21	+1.3
2,767,398	-		CCNA_02619	0.21	+0.1
2,767,409	+		CCNA_02619	0.22	+1.8
2,767,422	-		CCNA_02619	0.24	+0.3
2,767,435	+		CCNA_02619	0.25	+1.4
2,767,435	+		CCNA_02619	0.25	+3.1
2,767,450	+		CCNA_02619	0.27	+0.9
2,767,450	+		CCNA_02619	0.27	+1.7
2,767,450	+		CCNA_02619	0.27	+1.6
2,767,456	-		CCNA_02619	0.28	+3.6
2,767,458	-		CCNA_02619	0.28	+0.9
2,767,472	+		CCNA_02619	0.29	+1.8