Experiment: Tetracycline 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02970 and ABZR86_RS02975 are separated by 113 nucleotides ABZR86_RS02975 and ABZR86_RS02980 are separated by 388 nucleotides
ABZR86_RS02970: ABZR86_RS02970 - PAS domain-containing sensor histidine kinase, at 606,756 to 608,690
_RS02970
ABZR86_RS02975: ABZR86_RS02975 - response regulator, at 608,804 to 609,205
_RS02975
ABZR86_RS02980: ABZR86_RS02980 - DUF3182 family protein, at 609,594 to 610,724
_RS02980
Position (kb) 608
609
610 Strain fitness (log2 ratio) -1
0
1 at 608.401 kb on + strand, within ABZR86_RS02970 at 608.402 kb on - strand, within ABZR86_RS02970 at 608.402 kb on - strand, within ABZR86_RS02970 at 608.485 kb on + strand, within ABZR86_RS02970 at 608.521 kb on + strand at 608.521 kb on + strand at 608.521 kb on + strand at 608.521 kb on + strand at 608.626 kb on + strand at 608.626 kb on + strand at 608.627 kb on - strand at 608.627 kb on - strand at 608.636 kb on - strand at 608.666 kb on - strand at 609.044 kb on + strand, within ABZR86_RS02975 at 609.044 kb on + strand, within ABZR86_RS02975 at 609.044 kb on + strand, within ABZR86_RS02975 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.732 kb on + strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.733 kb on - strand, within ABZR86_RS02980 at 609.780 kb on + strand, within ABZR86_RS02980 at 609.780 kb on + strand, within ABZR86_RS02980 at 609.780 kb on + strand, within ABZR86_RS02980 at 609.988 kb on - strand, within ABZR86_RS02980 at 610.055 kb on + strand, within ABZR86_RS02980 at 610.055 kb on + strand, within ABZR86_RS02980 at 610.056 kb on - strand, within ABZR86_RS02980
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.012 mg/ml remove 608,401 + ABZR86_RS02970 0.85 -0.3 608,402 - ABZR86_RS02970 0.85 +0.1 608,402 - ABZR86_RS02970 0.85 -0.3 608,485 + ABZR86_RS02970 0.89 +0.3 608,521 + -0.3 608,521 + -0.1 608,521 + +0.1 608,521 + -0.0 608,626 + +0.3 608,626 + -0.0 608,627 - -1.1 608,627 - +0.0 608,636 - +1.6 608,666 - +0.2 609,044 + ABZR86_RS02975 0.60 -0.2 609,044 + ABZR86_RS02975 0.60 +0.7 609,044 + ABZR86_RS02975 0.60 +0.1 609,732 + ABZR86_RS02980 0.12 -0.4 609,732 + ABZR86_RS02980 0.12 +0.1 609,732 + ABZR86_RS02980 0.12 +0.4 609,732 + ABZR86_RS02980 0.12 -0.4 609,732 + ABZR86_RS02980 0.12 +0.3 609,733 - ABZR86_RS02980 0.12 +0.7 609,733 - ABZR86_RS02980 0.12 +0.2 609,733 - ABZR86_RS02980 0.12 -0.2 609,733 - ABZR86_RS02980 0.12 -0.7 609,733 - ABZR86_RS02980 0.12 -0.1 609,780 + ABZR86_RS02980 0.16 -0.9 609,780 + ABZR86_RS02980 0.16 -1.4 609,780 + ABZR86_RS02980 0.16 +0.6 609,988 - ABZR86_RS02980 0.35 +0.3 610,055 + ABZR86_RS02980 0.41 +0.1 610,055 + ABZR86_RS02980 0.41 -1.0 610,056 - ABZR86_RS02980 0.41 +0.6
Or see this region's nucleotide sequence