Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2253

Experiment: nitrate 25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 25 mM
2,321,887	-				-1.4
2,321,945	+				+1.4
2,321,948	-				-1.6
2,322,007	+				-0.4
2,322,010	-				+0.8
2,322,035	+				-0.1
2,322,043	-				-1.0
2,322,067	-				-0.0
2,322,067	-				+2.1
2,322,092	+				+0.3
2,322,092	+				-0.0
2,322,100	-				+2.4
2,322,102	+				+2.1
2,322,102	-				-0.2
2,322,111	-				+1.1
2,322,111	-				-0.5
2,322,112	+				-3.0
2,322,127	+				-0.7
2,322,132	+				-2.0
2,322,136	+				+0.2
2,322,144	-				+1.8
2,322,155	+				-1.0
2,322,163	-				+1.6
2,322,163	-				+0.9
2,322,208	+				-3.4
2,322,214	+				-2.0
2,322,214	+				+0.4
2,322,216	-				-2.0
2,322,222	-				-1.0
2,322,257	+				-2.6
2,322,281	-		Synpcc7942_2253	0.12	+0.7
2,322,283	+		Synpcc7942_2253	0.12	-3.8
2,322,324	-		Synpcc7942_2253	0.15	-1.4
2,322,329	+		Synpcc7942_2253	0.16	-1.4
2,322,348	+		Synpcc7942_2253	0.18	-0.6
2,322,348	-		Synpcc7942_2253	0.18	+1.7
2,322,350	+		Synpcc7942_2253	0.18	-2.4
2,322,350	+		Synpcc7942_2253	0.18	-1.6
2,322,350	+		Synpcc7942_2253	0.18	-2.4
2,322,358	-		Synpcc7942_2253	0.18	-0.5
2,322,358	-		Synpcc7942_2253	0.18	-1.8
2,322,358	-		Synpcc7942_2253	0.18	-1.0
2,322,363	+		Synpcc7942_2253	0.19	+0.2
2,322,371	-		Synpcc7942_2253	0.20	-0.0
2,322,396	+		Synpcc7942_2253	0.22	-2.4
2,322,404	-		Synpcc7942_2253	0.22	-1.4
2,322,406	+				-1.0
2,322,414	-		Synpcc7942_2253	0.23	-3.0
2,322,433	-		Synpcc7942_2253	0.25	+0.1
2,322,438	-		Synpcc7942_2253	0.25	-1.0
2,322,463	+		Synpcc7942_2253	0.28	-1.6
2,322,545	+		Synpcc7942_2253	0.35	-1.0
2,322,545	+		Synpcc7942_2253	0.35	-0.0
2,322,617	-		Synpcc7942_2253	0.41	-0.6
2,322,644	+		Synpcc7942_2253	0.43	-0.4
2,322,644	+		Synpcc7942_2253	0.43	+1.3
2,322,644	+		Synpcc7942_2253	0.43	-0.6
2,322,645	-		Synpcc7942_2253	0.43	-3.0
2,322,670	-		Synpcc7942_2253	0.45	-2.0
2,322,721	+		Synpcc7942_2253	0.50	-1.0
2,322,737	+		Synpcc7942_2253	0.51	-1.0
2,322,737	-		Synpcc7942_2253	0.51	+0.2
2,322,772	-				+0.6
2,322,800	+		Synpcc7942_2253	0.57	-2.0
2,322,800	+		Synpcc7942_2253	0.57	-2.6
2,322,800	+		Synpcc7942_2253	0.57	+2.7
2,322,823	+		Synpcc7942_2253	0.59	-2.6
2,322,831	-		Synpcc7942_2253	0.59	-1.4
2,322,831	-		Synpcc7942_2253	0.59	-1.4
2,322,832	-		Synpcc7942_2253	0.59	-0.6
2,322,832	-		Synpcc7942_2253	0.59	+0.3
2,322,857	+		Synpcc7942_2253	0.62	-1.0
2,322,860	-		Synpcc7942_2253	0.62	-0.7
2,322,904	+		Synpcc7942_2253	0.66	-2.0
2,322,912	-		Synpcc7942_2253	0.66	-0.0
2,322,917	-		Synpcc7942_2253	0.67	+1.0
2,322,917	-		Synpcc7942_2253	0.67	+0.4
2,322,942	+		Synpcc7942_2253	0.69	-0.4
2,322,950	+		Synpcc7942_2253	0.70	-1.0
2,322,980	+		Synpcc7942_2253	0.72	-2.0
2,322,985	+		Synpcc7942_2253	0.73	-1.2
2,322,988	-		Synpcc7942_2253	0.73	-2.0
2,322,990	+		Synpcc7942_2253	0.73	-1.6
2,322,998	-		Synpcc7942_2253	0.74	+2.0
2,323,000	+		Synpcc7942_2253	0.74	-3.4
2,323,013	+		Synpcc7942_2253	0.75	-1.4
2,323,013	+		Synpcc7942_2253	0.75	-1.0
2,323,013	+		Synpcc7942_2253	0.75	-1.6
2,323,013	+		Synpcc7942_2253	0.75	-2.0
2,323,013	+		Synpcc7942_2253	0.75	-1.0
2,323,013	+		Synpcc7942_2253	0.75	-1.0
2,323,013	+		Synpcc7942_2253	0.75	-0.7
2,323,021	-		Synpcc7942_2253	0.76	-2.0
2,323,021	-		Synpcc7942_2253	0.76	-2.2
2,323,021	-		Synpcc7942_2253	0.76	+1.8
2,323,021	-		Synpcc7942_2253	0.76	-2.0
2,323,021	-		Synpcc7942_2253	0.76	-3.4
2,323,021	-		Synpcc7942_2253	0.76	-2.6
2,323,021	-		Synpcc7942_2253	0.76	-0.5
2,323,112	-		Synpcc7942_2253	0.84	+0.8
2,323,155	-		Synpcc7942_2253	0.87	+1.3
2,323,176	+		Synpcc7942_2253	0.89	-1.8
2,323,176	+		Synpcc7942_2253	0.89	-0.0
2,323,184	-				+1.4
2,323,196	+				-2.0
2,323,241	+				-2.0
2,323,243	+				+1.3
2,323,244	+				-2.6
2,323,249	-				-1.0
2,323,287	+				-3.0
2,323,295	-				+0.8
2,323,303	+				+0.2
2,323,307	-				+0.6
2,323,310	+				+0.6
2,323,310	+				+2.4
2,323,312	+				-1.0
2,323,312	-				-0.4
2,323,344	+				-2.0
2,323,376	+				+1.8
2,323,408	+				-0.6
2,323,414	-				-0.6
2,323,426	+				-1.0
2,323,431	+				-3.6
2,323,436	+				-0.6
2,323,444	+				+1.8
2,323,451	+				+1.4
2,323,452	-				-0.6
2,323,468	+				+0.5
2,323,476	-				-3.0
2,323,478	+				-0.4
2,323,479	-				+1.5
2,323,493	-				+2.0
2,323,519	-				+1.8
2,323,527	+				+1.2
2,323,531	-				+1.0
2,323,536	-		Synpcc7942_2254	0.10	+1.3
2,323,536	-		Synpcc7942_2254	0.10	-1.0
2,323,582	-		Synpcc7942_2254	0.13	+1.4
2,323,584	-		Synpcc7942_2254	0.14	-2.0
2,323,586	-		Synpcc7942_2254	0.14	-2.6
2,323,586	-		Synpcc7942_2254	0.14	-0.0
2,323,606	-		Synpcc7942_2254	0.15	+0.9
2,323,612	+		Synpcc7942_2254	0.16	+0.5
2,323,626	-		Synpcc7942_2254	0.17	-1.0
2,323,630	-		Synpcc7942_2254	0.17	+1.1
2,323,694	+		Synpcc7942_2254	0.22	-3.0
2,323,694	+		Synpcc7942_2254	0.22	+2.3
2,323,702	-		Synpcc7942_2254	0.22	+0.7
2,323,711	+		Synpcc7942_2254	0.23	-2.0
2,323,747	+				+0.7
2,323,757	+		Synpcc7942_2254	0.26	-2.0
2,323,757	-		Synpcc7942_2254	0.26	-1.0
2,323,765	-		Synpcc7942_2254	0.27	+0.5
2,323,792	+		Synpcc7942_2254	0.29	-2.6
2,323,806	-		Synpcc7942_2254	0.30	-0.4
2,323,807	-		Synpcc7942_2254	0.30	+0.5
2,323,811	-		Synpcc7942_2254	0.30	-0.5
2,323,831	+		Synpcc7942_2254	0.32	+0.9
2,323,858	-		Synpcc7942_2254	0.34	-0.0
2,323,858	-		Synpcc7942_2254	0.34	+1.7
2,323,868	-		Synpcc7942_2254	0.35	+1.3
2,323,879	+		Synpcc7942_2254	0.35	+0.9
2,323,904	-		Synpcc7942_2254	0.37	+1.5
2,323,909	-		Synpcc7942_2254	0.38	+2.8
2,323,916	+		Synpcc7942_2254	0.38	+0.8
2,323,916	+		Synpcc7942_2254	0.38	-0.9
2,323,924	-		Synpcc7942_2254	0.39	-1.8
2,323,961	+		Synpcc7942_2254	0.41	+0.1
2,324,004	-		Synpcc7942_2254	0.45	+2.4
2,324,011	+		Synpcc7942_2254	0.45	-2.0
2,324,019	-		Synpcc7942_2254	0.46	+1.1
2,324,044	-		Synpcc7942_2254	0.47	+1.0
2,324,047	+		Synpcc7942_2254	0.48	+2.9
2,324,052	+		Synpcc7942_2254	0.48	-2.0
2,324,071	+		Synpcc7942_2254	0.49	+0.6
2,324,071	+		Synpcc7942_2254	0.49	+1.0
2,324,071	+		Synpcc7942_2254	0.49	+1.8
2,324,073	+		Synpcc7942_2254	0.50	-0.0
2,324,073	+		Synpcc7942_2254	0.50	+0.1
2,324,073	+		Synpcc7942_2254	0.50	-1.0
2,324,073	+		Synpcc7942_2254	0.50	+1.3
2,324,073	+		Synpcc7942_2254	0.50	+0.5
2,324,073	+		Synpcc7942_2254	0.50	+1.5
2,324,073	+		Synpcc7942_2254	0.50	-2.4
2,324,073	+		Synpcc7942_2254	0.50	+1.0
2,324,078	+		Synpcc7942_2254	0.50	+1.8
2,324,079	-		Synpcc7942_2254	0.50	-1.0
2,324,079	-		Synpcc7942_2254	0.50	-2.0
2,324,079	-		Synpcc7942_2254	0.50	+0.7
2,324,079	-				+0.8
2,324,079	-		Synpcc7942_2254	0.50	+2.3
2,324,079	-		Synpcc7942_2254	0.50	-0.2
2,324,081	-		Synpcc7942_2254	0.50	+0.4
2,324,081	-		Synpcc7942_2254	0.50	+1.5
2,324,081	-		Synpcc7942_2254	0.50	+0.9
2,324,081	-		Synpcc7942_2254	0.50	+4.1
2,324,138	+		Synpcc7942_2254	0.54	-2.0
2,324,138	+		Synpcc7942_2254	0.54	+0.4
2,324,140	+		Synpcc7942_2254	0.55	+0.1
2,324,141	-		Synpcc7942_2254	0.55	-1.0
2,324,142	+		Synpcc7942_2254	0.55	-2.0
2,324,142	+		Synpcc7942_2254	0.55	-1.0
2,324,142	+		Synpcc7942_2254	0.55	+2.7
2,324,142	+		Synpcc7942_2254	0.55	+0.4
2,324,142	+		Synpcc7942_2254	0.55	+2.0
2,324,148	-		Synpcc7942_2254	0.55	+1.8
2,324,150	-		Synpcc7942_2254	0.55	-2.0
2,324,150	-		Synpcc7942_2254	0.55	+1.8
2,324,170	+		Synpcc7942_2254	0.57	+2.3
2,324,175	+		Synpcc7942_2254	0.57	+1.7
2,324,175	+		Synpcc7942_2254	0.57	-1.0
2,324,183	-		Synpcc7942_2254	0.58	-0.0
2,324,183	-		Synpcc7942_2254	0.58	-0.3
2,324,183	-		Synpcc7942_2254	0.58	+2.4
2,324,243	+		Synpcc7942_2254	0.62	-2.0
2,324,251	-		Synpcc7942_2254	0.63	-1.0
2,324,252	-		Synpcc7942_2254	0.63	+2.5
2,324,289	-		Synpcc7942_2254	0.65	-2.6