Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1926

Experiment: nitrate 25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 25 mM
2,000,648	-		Synpcc7942_1924	0.84	+0.3
2,000,669	-		Synpcc7942_1924	0.88	-1.4
2,000,712	+				+1.5
2,000,712	+				-2.7
2,000,714	+				+1.4
2,000,714	+				+0.6
2,000,714	+				-1.1
2,000,714	+				-0.5
2,000,714	+				+0.2
2,000,714	+				+1.0
2,000,714	+				-0.2
2,000,714	+				+0.1
2,000,714	+				-0.1
2,000,714	+				-0.1
2,000,714	+				-2.7
2,000,714	+				-0.5
2,000,714	+				-0.7
2,000,714	+				-0.3
2,000,714	+				+2.2
2,000,714	+				-0.3
2,000,714	+				-0.3
2,000,717	-				-0.1
2,000,717	-				-3.1
2,000,722	-				+1.5
2,000,722	-				-1.0
2,000,722	-				+0.3
2,000,722	-				+1.4
2,000,722	-				+0.7
2,000,722	-				-0.6
2,000,722	-				-1.1
2,000,722	-				+1.8
2,000,722	-				-2.7
2,000,722	-				+2.2
2,000,722	-				-2.1
2,000,722	-				-1.7
2,000,743	-				+0.9
2,000,743	-				-1.1
2,000,743	-				-1.1
2,000,747	+				-1.1
2,000,753	-				-0.1
2,000,766	-				-0.1
2,000,782	+				-1.1
2,000,782	+				+2.2
2,000,782	+				+3.5
2,000,782	+				+0.9
2,000,782	+				-4.3
2,000,790	-				-2.7
2,000,793	+				-1.8
2,000,803	+				-3.1
2,000,806	-				+3.2
2,000,806	-				+2.6
2,000,812	-				-0.8
2,000,848	-		Synpcc7942_1925	0.14	+1.5
2,000,850	+		Synpcc7942_1925	0.14	+1.6
2,000,855	+		Synpcc7942_1925	0.14	-0.9
2,000,860	+		Synpcc7942_1925	0.15	-1.1
2,000,881	+		Synpcc7942_1925	0.17	+1.6
2,000,895	+		Synpcc7942_1925	0.19	+0.9
2,000,897	-		Synpcc7942_1925	0.19	-2.1
2,000,897	-		Synpcc7942_1925	0.19	+1.2
2,000,899	-		Synpcc7942_1925	0.20	-0.3
2,000,918	+		Synpcc7942_1925	0.22	+1.7
2,000,918	+		Synpcc7942_1925	0.22	+3.3
2,000,918	+		Synpcc7942_1925	0.22	+0.9
2,000,926	-		Synpcc7942_1925	0.23	-0.6
2,000,929	+		Synpcc7942_1925	0.23	+0.9
2,000,929	+		Synpcc7942_1925	0.23	+2.8
2,000,934	+		Synpcc7942_1925	0.24	-1.1
2,000,937	-		Synpcc7942_1925	0.24	-0.3
2,000,937	-		Synpcc7942_1925	0.24	-1.1
2,000,956	+		Synpcc7942_1925	0.26	+1.2
2,000,969	-		Synpcc7942_1925	0.28	+1.6
2,000,998	-		Synpcc7942_1925	0.31	-1.7
2,001,007	-		Synpcc7942_1925	0.32	+1.9
2,001,014	+		Synpcc7942_1925	0.33	+0.0
2,001,048	-		Synpcc7942_1925	0.37	-0.1
2,001,048	-		Synpcc7942_1925	0.37	-0.1
2,001,048	-		Synpcc7942_1925	0.37	+0.3
2,001,097	+		Synpcc7942_1925	0.43	-2.5
2,001,097	+		Synpcc7942_1925	0.43	+1.4
2,001,099	+		Synpcc7942_1925	0.43	+1.0
2,001,111	-		Synpcc7942_1925	0.44	-0.3
2,001,113	+		Synpcc7942_1925	0.45	+0.5
2,001,124	+		Synpcc7942_1925	0.46	+1.6
2,001,132	-		Synpcc7942_1925	0.47	-1.5
2,001,132	-		Synpcc7942_1925	0.47	-4.1
2,001,145	-		Synpcc7942_1925	0.48	-1.1
2,001,147	+		Synpcc7942_1925	0.49	-0.1
2,001,147	+		Synpcc7942_1925	0.49	-0.1
2,001,147	+		Synpcc7942_1925	0.49	+0.8
2,001,152	+		Synpcc7942_1925	0.49	+0.5
2,001,155	-		Synpcc7942_1925	0.50	+2.9
2,001,155	-		Synpcc7942_1925	0.50	+2.0
2,001,155	-		Synpcc7942_1925	0.50	-0.7
2,001,155	-		Synpcc7942_1925	0.50	+3.8
2,001,155	-		Synpcc7942_1925	0.50	+1.7
2,001,155	-		Synpcc7942_1925	0.50	+3.0
2,001,155	-		Synpcc7942_1925	0.50	+1.2
2,001,155	-		Synpcc7942_1925	0.50	+1.3
2,001,162	+		Synpcc7942_1925	0.50	+0.7
2,001,170	-		Synpcc7942_1925	0.51	+1.6
2,001,175	-		Synpcc7942_1925	0.52	-0.1
2,001,182	-		Synpcc7942_1925	0.53	-2.4
2,001,182	-		Synpcc7942_1925	0.53	-1.1
2,001,182	-		Synpcc7942_1925	0.53	+1.8
2,001,182	-		Synpcc7942_1925	0.53	+0.8
2,001,195	-		Synpcc7942_1925	0.54	+0.9
2,001,206	-		Synpcc7942_1925	0.56	-1.1
2,001,208	-		Synpcc7942_1925	0.56	-0.5
2,001,298	+		Synpcc7942_1925	0.66	+1.5
2,001,326	+		Synpcc7942_1925	0.70	-2.1
2,001,340	+		Synpcc7942_1925	0.71	-2.1
2,001,368	+		Synpcc7942_1925	0.75	-2.1
2,001,371	-		Synpcc7942_1925	0.75	-0.2
2,001,373	+		Synpcc7942_1925	0.75	+0.6
2,001,373	+		Synpcc7942_1925	0.75	-0.7
2,001,376	-		Synpcc7942_1925	0.76	+1.8
2,001,376	-		Synpcc7942_1925	0.76	+1.2
2,001,376	-		Synpcc7942_1925	0.76	-3.7
2,001,381	-		Synpcc7942_1925	0.76	+1.1
2,001,381	-		Synpcc7942_1925	0.76	+0.2
2,001,381	-		Synpcc7942_1925	0.76	+1.1
2,001,381	-		Synpcc7942_1925	0.76	-1.1
2,001,381	-		Synpcc7942_1925	0.76	-0.7
2,001,409	+		Synpcc7942_1925	0.79	-2.5
2,001,409	+		Synpcc7942_1925	0.79	-1.1
2,001,409	+		Synpcc7942_1925	0.79	-0.2
2,001,443	+		Synpcc7942_1925	0.83	-0.1
2,001,443	+		Synpcc7942_1925	0.83	+2.0
2,001,455	+		Synpcc7942_1925	0.85	+1.7
2,001,455	+		Synpcc7942_1925	0.85	+1.6
2,001,473	-		Synpcc7942_1925	0.87	+1.1
2,001,513	+				+1.9
2,001,518	+				+1.9
2,001,521	-				-2.7
2,001,521	-				-1.7
2,001,542	+				+1.2
2,001,542	-				-3.7
2,001,550	-				+0.5
2,001,550	-				+0.9
2,001,556	+				-1.1
2,001,556	+				-0.1
2,001,566	-				+0.7
2,001,568	+				-1.7
2,001,576	-				-0.1
2,001,576	-				+0.9
2,001,576	-				+0.5
2,001,580	+				+1.5
2,001,588	-				+0.8
2,001,649	+				-0.7
2,001,652	-				+0.3
2,001,681	+		Synpcc7942_1926	0.12	-3.4
2,001,736	-		Synpcc7942_1926	0.30	-1.1
2,001,736	-		Synpcc7942_1926	0.30	-0.1
2,001,738	+		Synpcc7942_1926	0.31	-2.7
2,001,745	+		Synpcc7942_1926	0.33	-2.1
2,001,747	+		Synpcc7942_1926	0.34	-1.5
2,001,807	+		Synpcc7942_1926	0.54	-1.1
2,001,823	+		Synpcc7942_1926	0.60	-1.1
2,001,823	+		Synpcc7942_1926	0.60	-1.6
2,001,831	-		Synpcc7942_1926	0.63	-0.1
2,001,831	-		Synpcc7942_1926	0.63	-0.1
2,001,838	+		Synpcc7942_1926	0.65	+1.2
2,001,838	+		Synpcc7942_1926	0.65	-2.5
2,001,846	-		Synpcc7942_1926	0.68	-2.5
2,001,848	+		Synpcc7942_1926	0.68	-1.9
2,001,856	-		Synpcc7942_1926	0.71	-1.5
2,001,882	-		Synpcc7942_1926	0.80	-2.3
2,001,889	+		Synpcc7942_1926	0.82	-2.1
2,001,896	+		Synpcc7942_1926	0.85	+1.4
2,001,897	-		Synpcc7942_1926	0.85	-3.3
2,001,897	-		Synpcc7942_1926	0.85	+2.1
2,001,897	-		Synpcc7942_1926	0.85	+1.7
2,001,897	-		Synpcc7942_1926	0.85	-1.1
2,001,901	+		Synpcc7942_1926	0.86	+1.5
2,001,901	+		Synpcc7942_1926	0.86	-0.4
2,001,901	+		Synpcc7942_1926	0.86	+0.6
2,001,908	+		Synpcc7942_1926	0.89	-0.1
2,001,909	-		Synpcc7942_1926	0.89	+2.7
2,001,911	-				-1.1
2,001,969	+				-1.1
2,001,972	-				+2.9
2,002,864	+		Synpcc7942_1928	0.11	-0.3
2,002,870	-		Synpcc7942_1928	0.14	+2.7
2,002,877	-		Synpcc7942_1928	0.16	+1.5
2,002,882	-		Synpcc7942_1928	0.19	-0.0
2,002,882	-		Synpcc7942_1928	0.19	+0.8
2,002,882	-		Synpcc7942_1928	0.19	+1.5