Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2199

Experiment: Cholin acetate 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cholin acetate 10 mM
2,509,483	-		Pf1N1B4_2197	0.52	+1.3
2,509,483	-		Pf1N1B4_2197	0.52	-0.3
2,509,530	+		Pf1N1B4_2197	0.58	+0.6
2,509,530	+		Pf1N1B4_2197	0.58	-0.8
2,509,530	+		Pf1N1B4_2197	0.58	-0.5
2,509,530	+		Pf1N1B4_2197	0.58	+0.7
2,509,531	-		Pf1N1B4_2197	0.58	+0.3
2,509,531	-		Pf1N1B4_2197	0.58	+0.3
2,509,531	-		Pf1N1B4_2197	0.58	+1.2
2,509,531	-				+0.3
2,509,531	-		Pf1N1B4_2197	0.58	-0.5
2,509,531	-		Pf1N1B4_2197	0.58	+2.3
2,509,531	-		Pf1N1B4_2197	0.58	-1.0
2,509,531	-				+0.3
2,509,557	+		Pf1N1B4_2197	0.62	+1.3
2,509,558	-		Pf1N1B4_2197	0.62	+0.3
2,509,558	-		Pf1N1B4_2197	0.62	-0.3
2,509,627	+		Pf1N1B4_2197	0.71	-1.4
2,509,627	+		Pf1N1B4_2197	0.71	+0.1
2,509,628	-				-0.3
2,509,628	-		Pf1N1B4_2197	0.71	-0.7
2,509,650	+		Pf1N1B4_2197	0.75	+0.1
2,509,650	+				-0.3
2,509,651	-		Pf1N1B4_2197	0.75	-0.7
2,509,651	-		Pf1N1B4_2197	0.75	+0.3
2,509,651	-		Pf1N1B4_2197	0.75	-0.1
2,509,677	+		Pf1N1B4_2197	0.78	+1.3
2,509,701	+		Pf1N1B4_2197	0.82	+0.7
2,509,702	-		Pf1N1B4_2197	0.82	-0.3
2,509,704	+		Pf1N1B4_2197	0.82	+0.0
2,509,704	+		Pf1N1B4_2197	0.82	+0.4
2,509,704	+		Pf1N1B4_2197	0.82	+0.7
2,509,705	-		Pf1N1B4_2197	0.82	-0.0
2,509,746	+				+2.3
2,509,746	+		Pf1N1B4_2197	0.88	-0.3
2,509,746	+		Pf1N1B4_2197	0.88	-0.5
2,509,746	+		Pf1N1B4_2197	0.88	-0.2
2,509,746	+				-0.7
2,509,746	+		Pf1N1B4_2197	0.88	+1.7
2,509,746	+		Pf1N1B4_2197	0.88	-0.8
2,509,746	+		Pf1N1B4_2197	0.88	-0.3
2,509,746	+				+1.9
2,509,746	+		Pf1N1B4_2197	0.88	-0.7
2,509,746	+		Pf1N1B4_2197	0.88	-0.5
2,509,746	+		Pf1N1B4_2197	0.88	+0.0
2,509,746	+				+1.9
2,509,746	+		Pf1N1B4_2197	0.88	+1.3
2,509,746	+		Pf1N1B4_2197	0.88	+1.3
2,509,746	+		Pf1N1B4_2197	0.88	+1.3
2,509,746	+		Pf1N1B4_2197	0.88	-2.1
2,509,746	+		Pf1N1B4_2197	0.88	+1.5
2,509,746	+		Pf1N1B4_2197	0.88	+1.3
2,509,746	+		Pf1N1B4_2197	0.88	-0.8
2,509,746	+		Pf1N1B4_2197	0.88	-0.3
2,509,747	-		Pf1N1B4_2197	0.88	+0.1
2,509,747	-		Pf1N1B4_2197	0.88	+1.0
2,509,747	-		Pf1N1B4_2197	0.88	-2.0
2,509,747	-		Pf1N1B4_2197	0.88	+0.3
2,509,747	-		Pf1N1B4_2197	0.88	+1.0
2,509,747	-		Pf1N1B4_2197	0.88	+1.1
2,509,747	-		Pf1N1B4_2197	0.88	+1.3
2,509,747	-		Pf1N1B4_2197	0.88	+0.3
2,509,767	+				-1.7
2,509,944	+		Pf1N1B4_2198	0.15	+0.7
2,509,944	+		Pf1N1B4_2198	0.15	-0.5
2,509,944	+		Pf1N1B4_2198	0.15	+0.9
2,509,945	-		Pf1N1B4_2198	0.15	-1.6
2,509,959	+		Pf1N1B4_2198	0.18	-0.3
2,509,959	+		Pf1N1B4_2198	0.18	-1.3
2,509,959	+		Pf1N1B4_2198	0.18	-1.8
2,509,960	-		Pf1N1B4_2198	0.18	+2.6
2,510,055	+		Pf1N1B4_2198	0.34	-0.4
2,510,055	+		Pf1N1B4_2198	0.34	-1.0
2,510,055	+		Pf1N1B4_2198	0.34	-0.1
2,510,055	+		Pf1N1B4_2198	0.34	-1.3
2,510,055	+		Pf1N1B4_2198	0.34	+0.6
2,510,055	+		Pf1N1B4_2198	0.34	-0.5
2,510,056	-				-1.0
2,510,056	-		Pf1N1B4_2198	0.34	-0.2
2,510,056	-		Pf1N1B4_2198	0.34	-1.3
2,510,190	+		Pf1N1B4_2198	0.57	+0.5
2,510,190	+		Pf1N1B4_2198	0.57	-0.7
2,510,191	-		Pf1N1B4_2198	0.57	+0.0
2,510,191	-		Pf1N1B4_2198	0.57	-0.3
2,510,191	-		Pf1N1B4_2198	0.57	+2.3
2,510,191	-		Pf1N1B4_2198	0.57	-1.5
2,510,218	-		Pf1N1B4_2198	0.62	+0.5
2,510,349	+		Pf1N1B4_2198	0.84	-1.0
2,510,349	+		Pf1N1B4_2198	0.84	-1.0
2,510,350	-		Pf1N1B4_2198	0.84	+0.5
2,510,350	-		Pf1N1B4_2198	0.84	+0.0
2,510,350	-		Pf1N1B4_2198	0.84	+0.8
2,510,470	+				+0.6
2,510,471	-				+1.0
2,510,484	+				-0.6
2,510,565	+				+0.7
2,510,565	+		Pf1N1B4_2199	0.22	+0.5
2,510,565	+		Pf1N1B4_2199	0.22	-1.5
2,510,565	+		Pf1N1B4_2199	0.22	-0.7
2,510,566	-				-0.3
2,510,566	-		Pf1N1B4_2199	0.22	-2.9
2,510,566	-		Pf1N1B4_2199	0.22	-1.7
2,510,638	-		Pf1N1B4_2199	0.42	+0.6
2,510,638	-		Pf1N1B4_2199	0.42	-1.0
2,510,638	-		Pf1N1B4_2199	0.42	-2.1
2,510,640	+		Pf1N1B4_2199	0.42	-0.3
2,510,640	+		Pf1N1B4_2199	0.42	+0.7
2,510,640	+		Pf1N1B4_2199	0.42	-2.0
2,510,640	+		Pf1N1B4_2199	0.42	-0.3
2,510,640	+		Pf1N1B4_2199	0.42	-1.1
2,510,640	+		Pf1N1B4_2199	0.42	-0.2
2,510,641	-		Pf1N1B4_2199	0.42	-2.0
2,510,641	-		Pf1N1B4_2199	0.42	-1.0
2,510,641	-		Pf1N1B4_2199	0.42	-2.0
2,510,641	-		Pf1N1B4_2199	0.42	+0.1
2,510,641	-		Pf1N1B4_2199	0.42	-0.8
2,510,658	+		Pf1N1B4_2199	0.47	-0.7
2,510,658	+		Pf1N1B4_2199	0.47	-0.5
2,510,658	+		Pf1N1B4_2199	0.47	+1.9
2,510,659	-		Pf1N1B4_2199	0.47	+0.4
2,510,659	-		Pf1N1B4_2199	0.47	-1.4
2,510,659	-				+2.9
2,510,871	+				+0.1
2,510,871	+				-0.3
2,510,945	+				+1.3
2,510,945	+				+0.6
2,510,945	+				+0.2
2,510,945	+				-0.7
2,510,946	-				+2.3
2,510,946	-				+0.9
2,511,098	-				+0.7
2,511,106	+		Pf1N1B4_2200	0.17	+0.2
2,511,106	+		Pf1N1B4_2200	0.17	+1.6
2,511,106	+		Pf1N1B4_2200	0.17	-0.7
2,511,106	+				+0.7
2,511,106	+		Pf1N1B4_2200	0.17	+0.7
2,511,106	+		Pf1N1B4_2200	0.17	-1.0
2,511,106	+		Pf1N1B4_2200	0.17	-0.7
2,511,106	+		Pf1N1B4_2200	0.17	+0.7
2,511,106	+		Pf1N1B4_2200	0.17	+0.7
2,511,106	+		Pf1N1B4_2200	0.17	-0.7
2,511,107	-		Pf1N1B4_2200	0.17	-1.0
2,511,107	-		Pf1N1B4_2200	0.17	+1.1
2,511,107	-		Pf1N1B4_2200	0.17	+1.3
2,511,139	+		Pf1N1B4_2200	0.19	+0.9
2,511,139	+		Pf1N1B4_2200	0.19	+1.6
2,511,140	-		Pf1N1B4_2200	0.19	+0.5
2,511,140	-		Pf1N1B4_2200	0.19	-2.4
2,511,140	-		Pf1N1B4_2200	0.19	+0.1
2,511,642	+		Pf1N1B4_2200	0.55	+0.3
2,511,642	+		Pf1N1B4_2200	0.55	+0.2
2,511,711	+		Pf1N1B4_2200	0.60	+0.3
2,511,711	+		Pf1N1B4_2200	0.60	-0.4
2,511,711	+		Pf1N1B4_2200	0.60	-1.3
2,511,711	+		Pf1N1B4_2200	0.60	-0.4
2,511,711	+		Pf1N1B4_2200	0.60	-0.8
2,511,759	+		Pf1N1B4_2200	0.64	-0.6
2,511,759	+		Pf1N1B4_2200	0.64	+0.3
2,511,759	+		Pf1N1B4_2200	0.64	-1.0
2,511,760	-		Pf1N1B4_2200	0.64	-0.6
2,511,760	-		Pf1N1B4_2200	0.64	+0.3
2,511,760	-		Pf1N1B4_2200	0.64	-0.3