Experiment: L-Glutamic (N); low aeration
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS19340 and HSERO_RS19345 overlap by 17 nucleotides HSERO_RS19345 and HSERO_RS19350 are separated by 58 nucleotides HSERO_RS19350 and HSERO_RS19355 are separated by 89 nucleotides
HSERO_RS19340: HSERO_RS19340 - amino acid ABC transporter permease, at 4,434,666 to 4,435,316
_RS19340
HSERO_RS19345: HSERO_RS19345 - amino acid ABC transporter ATP-binding protein, at 4,435,300 to 4,436,034
_RS19345
HSERO_RS19350: HSERO_RS19350 - amino acid ABC transporter, at 4,436,093 to 4,436,899
_RS19350
HSERO_RS19355: HSERO_RS19355 - galactarate dehydratase, at 4,436,989 to 4,438,524
_RS19355
Position (kb) 4436
4437 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4435.185 kb on + strand, within HSERO_RS19340 at 4435.218 kb on + strand, within HSERO_RS19340 at 4435.317 kb on + strand at 4435.354 kb on + strand at 4435.396 kb on - strand, within HSERO_RS19345 at 4435.426 kb on - strand, within HSERO_RS19345 at 4435.487 kb on - strand, within HSERO_RS19345 at 4435.517 kb on + strand, within HSERO_RS19345 at 4435.565 kb on + strand, within HSERO_RS19345 at 4435.727 kb on - strand, within HSERO_RS19345 at 4435.764 kb on + strand, within HSERO_RS19345 at 4435.802 kb on + strand, within HSERO_RS19345 at 4435.814 kb on + strand, within HSERO_RS19345 at 4435.867 kb on + strand, within HSERO_RS19345 at 4436.109 kb on + strand at 4436.243 kb on + strand, within HSERO_RS19350 at 4436.454 kb on - strand, within HSERO_RS19350 at 4436.501 kb on + strand, within HSERO_RS19350 at 4436.637 kb on + strand, within HSERO_RS19350 at 4436.642 kb on + strand, within HSERO_RS19350 at 4436.761 kb on + strand, within HSERO_RS19350 at 4436.863 kb on + strand at 4436.871 kb on - strand at 4436.874 kb on + strand at 4437.545 kb on + strand, within HSERO_RS19355 at 4437.609 kb on - strand, within HSERO_RS19355 at 4437.609 kb on - strand, within HSERO_RS19355 at 4437.650 kb on + strand, within HSERO_RS19355 at 4437.662 kb on - strand, within HSERO_RS19355 at 4437.802 kb on - strand, within HSERO_RS19355 at 4437.888 kb on + strand, within HSERO_RS19355
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N); low aeration remove 4,435,185 + HSERO_RS19340 0.80 +0.5 4,435,218 + HSERO_RS19340 0.85 +0.5 4,435,317 + +0.2 4,435,354 + -0.1 4,435,396 - HSERO_RS19345 0.13 -0.0 4,435,426 - HSERO_RS19345 0.17 -0.3 4,435,487 - HSERO_RS19345 0.25 +0.2 4,435,517 + HSERO_RS19345 0.30 +0.1 4,435,565 + HSERO_RS19345 0.36 -0.5 4,435,727 - HSERO_RS19345 0.58 +0.2 4,435,764 + HSERO_RS19345 0.63 +0.2 4,435,802 + HSERO_RS19345 0.68 -0.1 4,435,814 + HSERO_RS19345 0.70 +1.4 4,435,867 + HSERO_RS19345 0.77 -0.4 4,436,109 + +0.6 4,436,243 + HSERO_RS19350 0.19 -0.4 4,436,454 - HSERO_RS19350 0.45 -3.0 4,436,501 + HSERO_RS19350 0.51 -0.4 4,436,637 + HSERO_RS19350 0.67 -0.4 4,436,642 + HSERO_RS19350 0.68 -0.1 4,436,761 + HSERO_RS19350 0.83 -1.0 4,436,863 + -0.4 4,436,871 - +0.9 4,436,874 + +0.1 4,437,545 + HSERO_RS19355 0.36 +0.9 4,437,609 - HSERO_RS19355 0.40 -0.3 4,437,609 - HSERO_RS19355 0.40 +0.4 4,437,650 + HSERO_RS19355 0.43 +0.0 4,437,662 - HSERO_RS19355 0.44 -0.1 4,437,802 - HSERO_RS19355 0.53 +0.6 4,437,888 + HSERO_RS19355 0.59 +0.0
Or see this region's nucleotide sequence