Experiment: L-Glutamic (N); low aeration
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS05235 and HSERO_RS05240 are separated by 47 nucleotides HSERO_RS05240 and HSERO_RS05245 are separated by 7 nucleotides HSERO_RS05245 and HSERO_RS05250 are separated by 158 nucleotides
HSERO_RS05235: HSERO_RS05235 - L-fuconate dehydratase (EC 4.2.1.68) <small>(from data)</small>, at 1,159,430 to 1,160,707
_RS05235
HSERO_RS05240: HSERO_RS05240 - short-chain dehydrogenase, at 1,160,755 to 1,161,531
_RS05240
HSERO_RS05245: HSERO_RS05245 - hypothetical protein, at 1,161,539 to 1,161,901
_RS05245
HSERO_RS05250: HSERO_RS05250 - ABC transporter for L-fucose, ATPase component <small>(from data)</small>, at 1,162,060 to 1,163,622
_RS05250
Position (kb) 1161
1162 Strain fitness (log2 ratio) -1
0
1
2 at 1160.615 kb on + strand at 1160.825 kb on + strand at 1160.901 kb on + strand, within HSERO_RS05240 at 1160.963 kb on + strand, within HSERO_RS05240 at 1161.115 kb on + strand, within HSERO_RS05240 at 1161.234 kb on + strand, within HSERO_RS05240 at 1161.245 kb on + strand, within HSERO_RS05240 at 1161.411 kb on - strand, within HSERO_RS05240 at 1161.719 kb on + strand, within HSERO_RS05245 at 1161.782 kb on + strand, within HSERO_RS05245 at 1161.850 kb on - strand, within HSERO_RS05245 at 1161.976 kb on + strand at 1162.054 kb on - strand at 1162.445 kb on - strand, within HSERO_RS05250 at 1162.586 kb on + strand, within HSERO_RS05250 at 1162.613 kb on - strand, within HSERO_RS05250 at 1162.694 kb on - strand, within HSERO_RS05250 at 1162.698 kb on + strand, within HSERO_RS05250 at 1162.715 kb on + strand, within HSERO_RS05250 at 1162.889 kb on + strand, within HSERO_RS05250
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N); low aeration remove 1,160,615 + -1.0 1,160,825 + -0.3 1,160,901 + HSERO_RS05240 0.19 +0.0 1,160,963 + HSERO_RS05240 0.27 +0.2 1,161,115 + HSERO_RS05240 0.46 -0.1 1,161,234 + HSERO_RS05240 0.62 +1.9 1,161,245 + HSERO_RS05240 0.63 -0.0 1,161,411 - HSERO_RS05240 0.84 +0.1 1,161,719 + HSERO_RS05245 0.50 -1.4 1,161,782 + HSERO_RS05245 0.67 -0.6 1,161,850 - HSERO_RS05245 0.86 -0.4 1,161,976 + -0.3 1,162,054 - +0.3 1,162,445 - HSERO_RS05250 0.25 +0.1 1,162,586 + HSERO_RS05250 0.34 -1.2 1,162,613 - HSERO_RS05250 0.35 +0.0 1,162,694 - HSERO_RS05250 0.41 -0.2 1,162,698 + HSERO_RS05250 0.41 -0.3 1,162,715 + HSERO_RS05250 0.42 -1.4 1,162,889 + HSERO_RS05250 0.53 +1.1
Or see this region's nucleotide sequence