Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01759

Experiment: PYE

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_01758 and CCNA_01759 overlap by 4 nucleotidesCCNA_01759 and CCNA_01760 are separated by 166 nucleotides CCNA_01758: CCNA_01758 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 1,884,593 to 1,885,594 _01758 CCNA_01759: CCNA_01759 - peptidyl-prolyl cis-trans isomerase, at 1,885,591 to 1,886,940 _01759 CCNA_01760: CCNA_01760 - OstA-like organic solvent tolerance protein, at 1,887,107 to 1,889,536 _01760 Position (kb) 1885 1886 1887Strain fitness (log2 ratio) -2 -1 0 1 2at 1884.598 kb on - strandat 1884.598 kb on - strandat 1884.598 kb on - strandat 1885.596 kb on - strandat 1886.949 kb on - strandat 1886.962 kb on - strandat 1887.033 kb on - strandat 1887.124 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction PYE
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1,884,598 - +0.7
1,884,598 - +0.6
1,884,598 - +2.0
1,885,596 - -0.2
1,886,949 - -0.9
1,886,962 - +1.1
1,887,033 - +0.7
1,887,124 + -2.2

Or see this region's nucleotide sequence