Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07155

Experiment: no_plant_rhizosphere sample 3; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no_plant_rhizosphere sample 3; outgrowth in LB
1,511,625	+		ABZR87_RS07145	0.61	+0.2
1,511,625	+		ABZR87_RS07145	0.61	+0.6
1,511,625	+		ABZR87_RS07145	0.61	-0.1
1,511,626	-		ABZR87_RS07145	0.61	-0.1
1,511,745	+		ABZR87_RS07145	0.71	-0.1
1,511,745	+		ABZR87_RS07145	0.71	+0.9
1,511,745	+		ABZR87_RS07145	0.71	+1.7
1,511,746	-		ABZR87_RS07145	0.71	-0.5
1,511,746	-		ABZR87_RS07145	0.71	+0.6
1,511,746	-		ABZR87_RS07145	0.71	-1.3
1,511,760	+		ABZR87_RS07145	0.72	-1.2
1,511,761	-		ABZR87_RS07145	0.72	+0.2
1,511,761	-		ABZR87_RS07145	0.72	+2.3
1,511,761	-		ABZR87_RS07145	0.72	-1.7
1,511,761	-		ABZR87_RS07145	0.72	-0.6
1,511,761	-		ABZR87_RS07145	0.72	+1.1
1,511,780	+		ABZR87_RS07145	0.74	+0.1
1,511,780	+		ABZR87_RS07145	0.74	-1.1
1,511,781	-		ABZR87_RS07145	0.74	+0.4
1,511,810	+		ABZR87_RS07145	0.77	-0.8
1,511,810	+		ABZR87_RS07145	0.77	-0.4
1,511,819	+		ABZR87_RS07145	0.77	-1.5
1,511,819	+		ABZR87_RS07145	0.77	+0.5
1,511,820	-		ABZR87_RS07145	0.77	-0.1
1,511,820	-		ABZR87_RS07145	0.77	+0.1
1,511,820	-		ABZR87_RS07145	0.77	+1.2
1,511,824	-		ABZR87_RS07145	0.78	+0.1
1,511,824	-		ABZR87_RS07145	0.78	+0.0
1,511,824	-		ABZR87_RS07145	0.78	-0.1
1,511,824	-		ABZR87_RS07145	0.78	+0.7
1,511,824	-		ABZR87_RS07145	0.78	+0.9
1,511,824	-		ABZR87_RS07145	0.78	-1.2
1,511,824	-		ABZR87_RS07145	0.78	-0.0
1,511,824	-		ABZR87_RS07145	0.78	+0.7
1,511,875	+		ABZR87_RS07145	0.82	-2.3
1,511,875	+		ABZR87_RS07145	0.82	-0.4
1,511,875	+		ABZR87_RS07145	0.82	-1.3
1,511,875	+		ABZR87_RS07145	0.82	-0.8
1,511,875	+		ABZR87_RS07145	0.82	+0.1
1,511,875	+		ABZR87_RS07145	0.82	-0.5
1,511,875	+		ABZR87_RS07145	0.82	+1.0
1,511,876	-		ABZR87_RS07145	0.82	-0.1
1,511,876	-		ABZR87_RS07145	0.82	+0.5
1,511,876	-		ABZR87_RS07145	0.82	-0.5
1,511,876	-		ABZR87_RS07145	0.82	-0.4
1,511,876	-		ABZR87_RS07145	0.82	-1.6
1,511,876	-		ABZR87_RS07145	0.82	-0.0
1,511,876	-		ABZR87_RS07145	0.82	-0.2
1,511,882	+		ABZR87_RS07145	0.83	+1.6
1,511,882	+		ABZR87_RS07145	0.83	-2.2
1,511,882	+		ABZR87_RS07145	0.83	+0.9
1,511,882	+		ABZR87_RS07145	0.83	-0.2
1,511,882	+		ABZR87_RS07145	0.83	-0.1
1,511,882	+		ABZR87_RS07145	0.83	+1.2
1,511,882	+		ABZR87_RS07145	0.83	-0.2
1,511,882	+		ABZR87_RS07145	0.83	-0.6
1,511,882	+		ABZR87_RS07145	0.83	+1.9
1,511,882	+		ABZR87_RS07145	0.83	-0.1
1,511,882	+		ABZR87_RS07145	0.83	+0.8
1,511,882	+		ABZR87_RS07145	0.83	-1.0
1,511,882	+		ABZR87_RS07145	0.83	-0.1
1,511,882	+		ABZR87_RS07145	0.83	-0.1
1,511,882	+		ABZR87_RS07145	0.83	+0.2
1,511,883	-		ABZR87_RS07145	0.83	-1.0
1,511,883	-		ABZR87_RS07145	0.83	+0.4
1,511,883	-		ABZR87_RS07145	0.83	-0.9
1,511,883	-		ABZR87_RS07145	0.83	+0.7
1,511,883	-		ABZR87_RS07145	0.83	+0.2
1,511,883	-		ABZR87_RS07145	0.83	-0.4
1,511,883	-		ABZR87_RS07145	0.83	+0.5
1,511,883	-		ABZR87_RS07145	0.83	+0.1
1,511,883	-		ABZR87_RS07145	0.83	-1.1
1,511,883	-		ABZR87_RS07145	0.83	+0.1
1,511,883	-		ABZR87_RS07145	0.83	+0.5
1,511,883	-		ABZR87_RS07145	0.83	-0.1
1,511,883	-		ABZR87_RS07145	0.83	+0.2
1,511,883	-		ABZR87_RS07145	0.83	+0.5
1,511,883	-		ABZR87_RS07145	0.83	-1.1
1,511,883	-		ABZR87_RS07145	0.83	+0.2
1,511,960	+		ABZR87_RS07145	0.89	-0.2
1,511,960	+		ABZR87_RS07145	0.89	-1.0
1,511,961	-		ABZR87_RS07145	0.89	-0.4
1,511,961	-		ABZR87_RS07145	0.89	+0.6
1,511,997	+				-0.1
1,511,998	-				-1.8
1,511,998	-				-0.2
1,512,045	+				+0.2
1,512,045	+				-1.0
1,512,065	+				-1.5
1,512,065	+				+0.9
1,512,066	-				+0.2
1,512,066	-				+1.6
1,512,066	-				-0.2
1,512,088	+				-0.8
1,512,088	+				-1.0
1,512,088	+				-1.1
1,512,088	+				-0.7
1,512,089	-				-0.3
1,512,089	-				+1.5
1,512,115	+				-0.7
1,512,115	+				+0.6
1,512,115	+				+1.4
1,512,115	+				+0.0
1,512,116	-				-1.4
1,512,116	-				-1.4
1,512,117	-				-0.2
1,512,154	+		ABZR87_RS07150	0.17	+0.4
1,512,154	+		ABZR87_RS07150	0.17	-1.0
1,512,154	+		ABZR87_RS07150	0.17	+0.6
1,512,154	+		ABZR87_RS07150	0.17	+1.2
1,512,154	+		ABZR87_RS07150	0.17	-1.4
1,512,198	+		ABZR87_RS07150	0.28	+0.9
1,512,198	+		ABZR87_RS07150	0.28	+0.6
1,512,198	+		ABZR87_RS07150	0.28	+0.3
1,512,198	+		ABZR87_RS07150	0.28	-0.8
1,512,199	-		ABZR87_RS07150	0.28	-1.5
1,512,221	+		ABZR87_RS07150	0.34	+0.6
1,512,221	+		ABZR87_RS07150	0.34	-1.2
1,512,221	+		ABZR87_RS07150	0.34	-0.4
1,512,221	+		ABZR87_RS07150	0.34	+0.8
1,512,221	+		ABZR87_RS07150	0.34	+0.2
1,512,221	+		ABZR87_RS07150	0.34	-0.5
1,512,221	+		ABZR87_RS07150	0.34	-0.7
1,512,222	-		ABZR87_RS07150	0.34	+0.7
1,512,222	-		ABZR87_RS07150	0.34	+0.0
1,512,222	-		ABZR87_RS07150	0.34	-0.7
1,512,222	-		ABZR87_RS07150	0.34	-0.2
1,512,331	+		ABZR87_RS07150	0.61	-0.5
1,512,332	-		ABZR87_RS07150	0.61	+0.0
1,512,332	-		ABZR87_RS07150	0.61	-1.3
1,512,332	-		ABZR87_RS07150	0.61	+0.3
1,512,332	-		ABZR87_RS07150	0.61	-0.1
1,512,332	-		ABZR87_RS07150	0.61	-0.3
1,512,332	-		ABZR87_RS07150	0.61	+0.2
1,512,387	+		ABZR87_RS07150	0.75	-0.9
1,512,388	-		ABZR87_RS07150	0.75	+0.9
1,512,388	-		ABZR87_RS07150	0.75	-1.0
1,512,410	+		ABZR87_RS07150	0.80	-2.3
1,512,410	+		ABZR87_RS07150	0.80	+0.3
1,512,410	+		ABZR87_RS07150	0.80	-0.2
1,512,411	-		ABZR87_RS07150	0.80	+1.2
1,512,419	+		ABZR87_RS07150	0.82	+0.0
1,512,419	+		ABZR87_RS07150	0.82	+3.0
1,512,420	-		ABZR87_RS07150	0.83	+0.3
1,512,420	-		ABZR87_RS07150	0.83	+0.2
1,512,420	-		ABZR87_RS07150	0.83	-0.0
1,512,447	+		ABZR87_RS07150	0.89	-0.7
1,512,447	+		ABZR87_RS07150	0.89	+0.7
1,512,468	+				+0.8
1,512,468	+				+1.2
1,512,469	-				+1.0
1,512,488	+				-0.7
1,512,488	+				+0.9
1,512,488	+				+0.4
1,512,488	+				+0.1
1,512,488	+				+0.1
1,512,489	-				+0.0
1,512,489	-				-1.1
1,512,489	-				-1.0
1,512,489	-				+0.8
1,512,492	+				-1.1
1,512,492	+				+0.0
1,512,492	+				-1.3
1,512,492	+				-0.4
1,512,492	+				-0.3
1,512,492	+				+0.2
1,512,492	+				-2.3
1,512,493	-				+0.4
1,512,493	-				-1.4
1,512,493	-				-0.1
1,512,493	-				+0.0
1,512,493	-				-0.1
1,512,493	-				+1.0
1,512,493	-				+0.8
1,512,493	-				-0.8
1,512,493	-				-0.4
1,512,493	-				-0.1
1,512,493	-				+0.5
1,512,565	+				-0.2
1,512,565	+				+0.3
1,512,565	+				+0.4
1,512,565	+				+0.6
1,512,565	+				-0.0
1,512,566	-				-1.4
1,512,566	-				-2.5
1,512,566	-				+1.4
1,512,566	-				+0.1
1,512,566	-				-0.2
1,512,566	-				+0.1
1,512,566	-				+1.4
1,512,566	-				-0.1
1,512,570	+				+0.9
1,512,570	+				+0.6
1,512,570	+				-0.0
1,512,571	-				-0.7
1,512,571	-				+0.6
1,512,571	-				+0.6
1,512,593	+				-1.1
1,512,616	+				+0.0
1,512,616	+				+2.1
1,512,616	+				+0.9
1,512,684	+		ABZR87_RS07155	0.26	+0.1
1,512,684	+		ABZR87_RS07155	0.26	+0.0
1,512,684	+		ABZR87_RS07155	0.26	+0.5
1,512,684	+		ABZR87_RS07155	0.26	+0.9
1,512,685	-		ABZR87_RS07155	0.27	-0.2
1,512,685	-		ABZR87_RS07155	0.27	+0.5
1,512,685	-		ABZR87_RS07155	0.27	-0.0
1,512,685	-		ABZR87_RS07155	0.27	-1.6
1,512,698	+		ABZR87_RS07155	0.32	-1.6
1,512,729	+		ABZR87_RS07155	0.44	-2.5
1,512,729	+		ABZR87_RS07155	0.44	-0.2
1,512,729	+		ABZR87_RS07155	0.44	+0.3
1,512,730	-		ABZR87_RS07155	0.44	+0.4
1,512,730	-		ABZR87_RS07155	0.44	+0.4
1,512,730	-		ABZR87_RS07155	0.44	+0.0
1,512,730	-		ABZR87_RS07155	0.44	-1.1
1,512,730	-		ABZR87_RS07155	0.44	-1.1
1,512,883	+				+0.1
1,512,883	+				-1.7
1,512,883	+				-4.7
1,512,884	-				+0.9
1,512,884	-				-0.2
1,512,884	-				+0.7
1,512,889	+				-0.4
1,512,889	+				+1.5
1,512,889	+				+0.7
1,512,889	+				-0.4
1,512,890	-				-0.7
1,512,890	-				-0.3
1,512,890	-				-0.1
1,512,890	-				+0.6
1,512,890	-				-0.2
1,512,890	-				+0.1
1,512,892	+				+0.3
1,512,892	+				+1.0
1,512,892	+				+0.1
1,512,892	+				+0.1
1,512,893	-				-1.2
1,512,893	-				-2.0
1,512,893	-				+1.4
1,512,929	-				-0.4
1,512,939	+				+0.8
1,512,939	+				+0.2
1,512,939	+				+0.6
1,512,939	+				+1.0
1,512,944	+				-0.1
1,512,944	+				+0.6
1,512,944	+				-0.5
1,512,944	+				-1.1
1,512,944	+				-1.5
1,512,944	+				-0.7
1,512,945	-				+0.2
1,512,945	-				+0.9
1,512,945	-				-0.9
1,512,945	-				+0.9
1,512,956	-				+0.3
1,512,987	+				+0.4
1,512,987	+				-0.7
1,513,006	+				-0.2
1,513,007	-				-1.0
1,513,057	+				+1.5
1,513,057	+				+0.9
1,513,058	-				+1.1
1,513,058	-				+0.8
1,513,058	-				-1.6
1,513,143	+				+1.0
1,513,143	+				+0.6
1,513,143	+				+1.2
1,513,143	+				-0.1
1,513,144	-				+0.5
1,513,144	-				+1.4
1,513,144	-				+0.2
1,513,167	+				-0.1
1,513,167	+				+0.7
1,513,168	-				+0.1
1,513,168	-				+0.0
1,513,218	+				-1.5
1,513,218	+				+0.6
1,513,219	-				-1.8
1,513,219	-				+0.2
1,513,247	+				-0.2
1,513,247	+				+0.7
1,513,248	-				-0.2
1,513,271	+				-0.1
1,513,272	-				-0.7
1,513,272	-				+0.0
1,513,295	+				-0.2
1,513,299	+				+0.3
1,513,299	+				-3.2
1,513,299	+				-1.5
1,513,300	-				-0.3
1,513,300	-				-0.3
1,513,300	-				-0.6
1,513,300	-				-0.6
1,513,300	-				-0.6
1,513,300	-				-0.7
1,513,307	+				+0.4
1,513,307	+				-1.1
1,513,307	+				+0.5
1,513,307	+				-0.2
1,513,307	+				+0.4
1,513,307	+				-0.1
1,513,308	-				+0.7
1,513,308	-				-0.5
1,513,308	-				+0.0
1,513,308	-				-0.2
1,513,308	-				-1.5
1,513,308	-				-0.3
1,513,308	-				-0.2
1,513,308	-				+0.2
1,513,308	-				+0.6
1,513,308	-				+1.0
1,513,311	+				+0.2
1,513,311	+				-0.8
1,513,312	-				+0.5
1,513,312	-				+1.1
1,513,328	-				-0.9
1,513,328	-				+0.3
1,513,328	-				+0.2
1,513,328	-				-0.2
1,513,349	+				-0.2
1,513,349	+				-0.2
1,513,349	+				+0.2
1,513,349	+				-0.3
1,513,350	-				-1.0
1,513,350	-				-0.0
1,513,377	+				+0.5
1,513,377	+				+0.3
1,513,379	+				+0.2
1,513,379	+				+0.7
1,513,379	+				+0.9
1,513,379	+				-0.4
1,513,379	+				+0.6
1,513,380	-				-0.6
1,513,380	-				+1.6
1,513,380	-				-0.8
1,513,380	-				-0.6
1,513,383	+		ABZR87_RS07160	0.10	+0.7
1,513,384	-		ABZR87_RS07160	0.11	+0.2
1,513,384	-		ABZR87_RS07160	0.11	+0.2
1,513,384	-		ABZR87_RS07160	0.11	+0.4
1,513,384	-		ABZR87_RS07160	0.11	+0.4
1,513,384	-		ABZR87_RS07160	0.11	-0.6
1,513,384	-		ABZR87_RS07160	0.11	+1.0
1,513,384	-		ABZR87_RS07160	0.11	+1.0
1,513,384	-		ABZR87_RS07160	0.11	+0.5
1,513,384	-		ABZR87_RS07160	0.11	+1.2
1,513,426	+		ABZR87_RS07160	0.19	+0.5
1,513,426	+		ABZR87_RS07160	0.19	-0.9
1,513,426	+		ABZR87_RS07160	0.19	+3.9
1,513,426	+		ABZR87_RS07160	0.19	-0.5
1,513,426	+		ABZR87_RS07160	0.19	+0.8
1,513,426	+		ABZR87_RS07160	0.19	+0.2
1,513,426	+		ABZR87_RS07160	0.19	-0.0
1,513,426	+		ABZR87_RS07160	0.19	-1.5
1,513,427	-		ABZR87_RS07160	0.19	+0.8
1,513,427	-		ABZR87_RS07160	0.19	-0.2
1,513,427	-		ABZR87_RS07160	0.19	-2.7
1,513,427	-		ABZR87_RS07160	0.19	+0.1
1,513,438	+		ABZR87_RS07160	0.21	+0.2
1,513,438	+		ABZR87_RS07160	0.21	-0.4
1,513,438	+		ABZR87_RS07160	0.21	+0.4
1,513,439	-		ABZR87_RS07160	0.21	+1.1
1,513,439	-		ABZR87_RS07160	0.21	-1.1
1,513,439	-		ABZR87_RS07160	0.21	-1.0
1,513,439	-		ABZR87_RS07160	0.21	-0.4
1,513,440	+		ABZR87_RS07160	0.22	+1.1
1,513,440	+		ABZR87_RS07160	0.22	-0.3
1,513,440	+		ABZR87_RS07160	0.22	-1.3
1,513,441	-		ABZR87_RS07160	0.22	+0.3
1,513,441	-		ABZR87_RS07160	0.22	+1.3
1,513,441	-		ABZR87_RS07160	0.22	-1.6
1,513,441	-		ABZR87_RS07160	0.22	-1.0
1,513,485	+		ABZR87_RS07160	0.31	+0.1
1,513,561	+		ABZR87_RS07160	0.46	-0.1
1,513,617	+		ABZR87_RS07160	0.57	+0.4
1,513,650	-		ABZR87_RS07160	0.63	+0.2
1,513,667	+		ABZR87_RS07160	0.67	+1.3
1,513,667	+		ABZR87_RS07160	0.67	+1.1
1,513,667	+		ABZR87_RS07160	0.67	-0.3
1,513,667	+		ABZR87_RS07160	0.67	+0.6
1,513,667	+		ABZR87_RS07160	0.67	+0.6
1,513,667	+		ABZR87_RS07160	0.67	+0.6
1,513,667	+		ABZR87_RS07160	0.67	-1.8
1,513,667	+		ABZR87_RS07160	0.67	-0.5
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1,513,667	+		ABZR87_RS07160	0.67	-1.2
1,513,668	-		ABZR87_RS07160	0.67	+0.9
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1,513,668	-		ABZR87_RS07160	0.67	+1.1
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1,513,668	-		ABZR87_RS07160	0.67	+0.1
1,513,668	-		ABZR87_RS07160	0.67	+0.2
1,513,668	-		ABZR87_RS07160	0.67	+2.0
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1,513,668	-		ABZR87_RS07160	0.67	+1.3
1,513,675	+		ABZR87_RS07160	0.68	-1.9
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1,513,675	+		ABZR87_RS07160	0.68	-1.0
1,513,676	-		ABZR87_RS07160	0.68	+0.0
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1,513,692	+		ABZR87_RS07160	0.72	-0.9
1,513,693	-		ABZR87_RS07160	0.72	-0.1
1,513,693	-		ABZR87_RS07160	0.72	-0.3
1,513,693	-		ABZR87_RS07160	0.72	-0.5
1,513,713	+		ABZR87_RS07160	0.76	+0.4
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1,513,713	+		ABZR87_RS07160	0.76	+1.2
1,513,714	-		ABZR87_RS07160	0.76	+0.8
1,513,714	-		ABZR87_RS07160	0.76	+3.1
1,513,714	-		ABZR87_RS07160	0.76	-0.1
1,513,714	-		ABZR87_RS07160	0.76	+0.3
1,513,714	-		ABZR87_RS07160	0.76	-0.2
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1,513,751	+		ABZR87_RS07160	0.83	+0.3
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1,513,833	-				-0.1
1,513,833	-				+0.3
1,513,843	+				-1.7
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1,513,843	+				-0.3
1,513,844	-				-0.1
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1,513,844	-				+0.4