Experiment: Chloramphenicol 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS16165 and ABZR86_RS16170 overlap by 4 nucleotides ABZR86_RS16170 and ABZR86_RS16175 are separated by 345 nucleotides
ABZR86_RS16165: ABZR86_RS16165 - diguanylate cyclase, at 3,651,447 to 3,653,255
_RS16165
ABZR86_RS16170: ABZR86_RS16170 - hypothetical protein, at 3,653,252 to 3,653,539
_RS16170
ABZR86_RS16175: ABZR86_RS16175 - hypothetical protein, at 3,653,885 to 3,654,145
_RS16175
Position (kb)
3653
3654 Strain fitness (log2 ratio)
-2
-1
0
1 at 3652.258 kb on + strand, within ABZR86_RS16165 at 3652.258 kb on + strand, within ABZR86_RS16165 at 3652.258 kb on + strand, within ABZR86_RS16165 at 3652.258 kb on + strand, within ABZR86_RS16165 at 3652.258 kb on + strand, within ABZR86_RS16165 at 3652.258 kb on + strand, within ABZR86_RS16165 at 3652.258 kb on + strand, within ABZR86_RS16165 at 3652.258 kb on + strand, within ABZR86_RS16165 at 3652.258 kb on + strand, within ABZR86_RS16165 at 3652.259 kb on - strand, within ABZR86_RS16165 at 3652.259 kb on - strand, within ABZR86_RS16165 at 3652.259 kb on - strand, within ABZR86_RS16165 at 3652.259 kb on - strand, within ABZR86_RS16165 at 3652.259 kb on - strand, within ABZR86_RS16165 at 3652.270 kb on + strand, within ABZR86_RS16165 at 3652.271 kb on - strand, within ABZR86_RS16165 at 3652.316 kb on - strand, within ABZR86_RS16165 at 3652.327 kb on + strand, within ABZR86_RS16165 at 3652.328 kb on - strand, within ABZR86_RS16165 at 3652.328 kb on - strand, within ABZR86_RS16165 at 3652.351 kb on + strand, within ABZR86_RS16165 at 3652.495 kb on + strand, within ABZR86_RS16165 at 3652.495 kb on + strand, within ABZR86_RS16165 at 3652.574 kb on + strand, within ABZR86_RS16165 at 3652.574 kb on + strand, within ABZR86_RS16165 at 3652.574 kb on + strand, within ABZR86_RS16165 at 3652.583 kb on - strand, within ABZR86_RS16165 at 3652.660 kb on + strand, within ABZR86_RS16165 at 3652.738 kb on + strand, within ABZR86_RS16165 at 3652.739 kb on - strand, within ABZR86_RS16165 at 3652.739 kb on - strand, within ABZR86_RS16165 at 3652.877 kb on - strand, within ABZR86_RS16165 at 3652.898 kb on + strand, within ABZR86_RS16165 at 3652.898 kb on + strand, within ABZR86_RS16165 at 3652.987 kb on + strand, within ABZR86_RS16165 at 3652.988 kb on - strand, within ABZR86_RS16165 at 3652.996 kb on + strand, within ABZR86_RS16165 at 3652.996 kb on + strand, within ABZR86_RS16165 at 3652.997 kb on - strand, within ABZR86_RS16165 at 3652.999 kb on + strand, within ABZR86_RS16165 at 3652.999 kb on + strand, within ABZR86_RS16165 at 3652.999 kb on + strand, within ABZR86_RS16165 at 3652.999 kb on + strand, within ABZR86_RS16165 at 3653.000 kb on - strand, within ABZR86_RS16165 at 3653.000 kb on - strand, within ABZR86_RS16165 at 3653.000 kb on - strand, within ABZR86_RS16165 at 3653.023 kb on + strand, within ABZR86_RS16165 at 3653.648 kb on + strand at 3653.794 kb on + strand at 3653.794 kb on + strand at 3653.845 kb on + strand at 3653.845 kb on + strand at 3653.845 kb on + strand at 3653.845 kb on + strand at 3653.845 kb on + strand at 3653.845 kb on + strand at 3653.845 kb on + strand at 3653.845 kb on + strand at 3653.845 kb on + strand at 3653.845 kb on + strand at 3653.846 kb on - strand at 3653.846 kb on - strand at 3654.233 kb on + strand at 3654.233 kb on + strand at 3654.258 kb on + strand at 3654.258 kb on + strand at 3654.258 kb on + strand at 3654.258 kb on + strand at 3654.259 kb on - strand at 3654.259 kb on - strand at 3654.259 kb on - strand at 3654.259 kb on - strand at 3654.259 kb on - strand at 3654.260 kb on + strand at 3654.260 kb on + strand at 3654.260 kb on + strand at 3654.260 kb on + strand at 3654.260 kb on + strand at 3654.260 kb on + strand at 3654.261 kb on - strand at 3654.261 kb on - strand at 3654.261 kb on - strand at 3654.261 kb on - strand at 3654.320 kb on + strand at 3654.376 kb on + strand at 3654.377 kb on - strand at 3654.377 kb on - strand at 3654.401 kb on + strand at 3654.474 kb on + strand at 3654.475 kb on - strand at 3654.475 kb on - strand at 3654.475 kb on - strand at 3654.475 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.012 mg/ml remove 3,652,258 + ABZR86_RS16165 0.45 +0.5 3,652,258 + ABZR86_RS16165 0.45 -0.4 3,652,258 + ABZR86_RS16165 0.45 +0.8 3,652,258 + ABZR86_RS16165 0.45 +1.4 3,652,258 + ABZR86_RS16165 0.45 +0.6 3,652,258 + ABZR86_RS16165 0.45 -0.1 3,652,258 + ABZR86_RS16165 0.45 +0.7 3,652,258 + ABZR86_RS16165 0.45 -1.6 3,652,258 + ABZR86_RS16165 0.45 -0.6 3,652,259 - ABZR86_RS16165 0.45 -0.2 3,652,259 - ABZR86_RS16165 0.45 -0.0 3,652,259 - ABZR86_RS16165 0.45 +0.5 3,652,259 - ABZR86_RS16165 0.45 +0.6 3,652,259 - ABZR86_RS16165 0.45 +0.9 3,652,270 + ABZR86_RS16165 0.45 -0.5 3,652,271 - ABZR86_RS16165 0.46 +0.4 3,652,316 - ABZR86_RS16165 0.48 -0.8 3,652,327 + ABZR86_RS16165 0.49 +0.2 3,652,328 - ABZR86_RS16165 0.49 +0.5 3,652,328 - ABZR86_RS16165 0.49 +0.5 3,652,351 + ABZR86_RS16165 0.50 -2.1 3,652,495 + ABZR86_RS16165 0.58 +0.5 3,652,495 + ABZR86_RS16165 0.58 -0.6 3,652,574 + ABZR86_RS16165 0.62 +0.6 3,652,574 + ABZR86_RS16165 0.62 +1.3 3,652,574 + ABZR86_RS16165 0.62 +0.1 3,652,583 - ABZR86_RS16165 0.63 +0.5 3,652,660 + ABZR86_RS16165 0.67 +0.4 3,652,738 + ABZR86_RS16165 0.71 -0.4 3,652,739 - ABZR86_RS16165 0.71 +1.2 3,652,739 - ABZR86_RS16165 0.71 +0.5 3,652,877 - ABZR86_RS16165 0.79 +0.4 3,652,898 + ABZR86_RS16165 0.80 +0.8 3,652,898 + ABZR86_RS16165 0.80 +0.7 3,652,987 + ABZR86_RS16165 0.85 +0.2 3,652,988 - ABZR86_RS16165 0.85 +0.3 3,652,996 + ABZR86_RS16165 0.86 +0.4 3,652,996 + ABZR86_RS16165 0.86 +1.3 3,652,997 - ABZR86_RS16165 0.86 +0.7 3,652,999 + ABZR86_RS16165 0.86 -0.4 3,652,999 + ABZR86_RS16165 0.86 +0.5 3,652,999 + ABZR86_RS16165 0.86 -0.2 3,652,999 + ABZR86_RS16165 0.86 -1.0 3,653,000 - ABZR86_RS16165 0.86 +0.4 3,653,000 - ABZR86_RS16165 0.86 -1.3 3,653,000 - ABZR86_RS16165 0.86 -0.2 3,653,023 + ABZR86_RS16165 0.87 +0.5 3,653,648 + -0.2 3,653,794 + +0.3 3,653,794 + +0.0 3,653,845 + +0.6 3,653,845 + +0.1 3,653,845 + +1.3 3,653,845 + +0.5 3,653,845 + -1.0 3,653,845 + -0.4 3,653,845 + +0.7 3,653,845 + +0.1 3,653,845 + +0.3 3,653,845 + -1.9 3,653,846 - -0.4 3,653,846 - -0.1 3,654,233 + -0.4 3,654,233 + +0.2 3,654,258 + +1.2 3,654,258 + -0.6 3,654,258 + +0.2 3,654,258 + +0.7 3,654,259 - -0.2 3,654,259 - -0.7 3,654,259 - +0.5 3,654,259 - +1.3 3,654,259 - -1.2 3,654,260 + -0.4 3,654,260 + -0.2 3,654,260 + +0.3 3,654,260 + -0.2 3,654,260 + +0.8 3,654,260 + -0.2 3,654,261 - +0.1 3,654,261 - -0.5 3,654,261 - -0.1 3,654,261 - +0.2 3,654,320 + +0.7 3,654,376 + -0.1 3,654,377 - +0.7 3,654,377 - -0.5 3,654,401 + -0.3 3,654,474 + +0.1 3,654,475 - +0.2 3,654,475 - -0.3 3,654,475 - +0.7 3,654,475 - -0.9
Or see this region's nucleotide sequence