Experiment: Chloramphenicol 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS06145 and ABZR86_RS06150 overlap by 4 nucleotides ABZR86_RS06150 and ABZR86_RS06155 overlap by 1 nucleotides
ABZR86_RS06145: ABZR86_RS06145 - endolytic transglycosylase MltG, at 1,378,404 to 1,379,441
_RS06145
ABZR86_RS06150: ABZR86_RS06150 - aminodeoxychorismate lyase, at 1,379,438 to 1,380,256
_RS06150
ABZR86_RS06155: ABZR86_RS06155 - aminodeoxychorismate synthase component I, at 1,380,256 to 1,381,605
_RS06155
Position (kb)
1379
1380
1381 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1378.501 kb on + strand at 1378.502 kb on - strand at 1378.502 kb on - strand at 1378.595 kb on - strand, within ABZR86_RS06145 at 1378.595 kb on - strand, within ABZR86_RS06145 at 1378.603 kb on + strand, within ABZR86_RS06145 at 1378.604 kb on - strand, within ABZR86_RS06145 at 1378.637 kb on + strand, within ABZR86_RS06145 at 1378.648 kb on + strand, within ABZR86_RS06145 at 1378.648 kb on + strand, within ABZR86_RS06145 at 1378.648 kb on + strand, within ABZR86_RS06145 at 1378.648 kb on + strand, within ABZR86_RS06145 at 1378.649 kb on - strand, within ABZR86_RS06145 at 1378.649 kb on - strand, within ABZR86_RS06145 at 1378.649 kb on - strand, within ABZR86_RS06145 at 1378.649 kb on - strand, within ABZR86_RS06145 at 1378.667 kb on - strand, within ABZR86_RS06145 at 1378.667 kb on - strand, within ABZR86_RS06145 at 1378.697 kb on + strand, within ABZR86_RS06145 at 1378.697 kb on + strand, within ABZR86_RS06145 at 1378.697 kb on + strand, within ABZR86_RS06145 at 1378.697 kb on + strand, within ABZR86_RS06145 at 1378.697 kb on + strand, within ABZR86_RS06145 at 1378.697 kb on + strand, within ABZR86_RS06145 at 1378.697 kb on + strand, within ABZR86_RS06145 at 1378.697 kb on + strand, within ABZR86_RS06145 at 1378.697 kb on + strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.698 kb on - strand, within ABZR86_RS06145 at 1378.704 kb on - strand, within ABZR86_RS06145 at 1378.704 kb on - strand, within ABZR86_RS06145 at 1378.704 kb on - strand, within ABZR86_RS06145 at 1378.799 kb on - strand, within ABZR86_RS06145 at 1378.799 kb on - strand, within ABZR86_RS06145 at 1378.913 kb on - strand, within ABZR86_RS06145 at 1378.913 kb on - strand, within ABZR86_RS06145 at 1378.913 kb on - strand, within ABZR86_RS06145 at 1378.919 kb on - strand, within ABZR86_RS06145 at 1378.919 kb on - strand, within ABZR86_RS06145 at 1378.919 kb on - strand, within ABZR86_RS06145 at 1378.919 kb on - strand, within ABZR86_RS06145 at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.512 kb on - strand at 1379.512 kb on - strand at 1379.512 kb on - strand at 1379.512 kb on - strand at 1379.512 kb on - strand at 1379.512 kb on - strand at 1379.967 kb on + strand, within ABZR86_RS06150 at 1379.968 kb on - strand, within ABZR86_RS06150 at 1379.968 kb on - strand, within ABZR86_RS06150 at 1379.968 kb on - strand, within ABZR86_RS06150 at 1380.032 kb on + strand, within ABZR86_RS06150 at 1380.090 kb on - strand, within ABZR86_RS06150 at 1380.437 kb on + strand, within ABZR86_RS06155 at 1380.438 kb on - strand, within ABZR86_RS06155 at 1380.438 kb on - strand, within ABZR86_RS06155 at 1380.456 kb on - strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.932 kb on + strand, within ABZR86_RS06155 at 1381.003 kb on - strand, within ABZR86_RS06155
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.012 mg/ml remove 1,378,501 + -1.4 1,378,502 - +0.7 1,378,502 - +0.9 1,378,595 - ABZR86_RS06145 0.18 -3.0 1,378,595 - ABZR86_RS06145 0.18 -0.5 1,378,603 + ABZR86_RS06145 0.19 -1.4 1,378,604 - ABZR86_RS06145 0.19 +0.3 1,378,637 + ABZR86_RS06145 0.22 +0.7 1,378,648 + ABZR86_RS06145 0.24 +0.3 1,378,648 + ABZR86_RS06145 0.24 -0.1 1,378,648 + ABZR86_RS06145 0.24 +0.7 1,378,648 + ABZR86_RS06145 0.24 +0.1 1,378,649 - ABZR86_RS06145 0.24 -0.9 1,378,649 - ABZR86_RS06145 0.24 +0.1 1,378,649 - ABZR86_RS06145 0.24 +1.2 1,378,649 - ABZR86_RS06145 0.24 -0.8 1,378,667 - ABZR86_RS06145 0.25 -0.7 1,378,667 - ABZR86_RS06145 0.25 +0.6 1,378,697 + ABZR86_RS06145 0.28 +0.9 1,378,697 + ABZR86_RS06145 0.28 +0.1 1,378,697 + ABZR86_RS06145 0.28 +0.8 1,378,697 + ABZR86_RS06145 0.28 -0.8 1,378,697 + ABZR86_RS06145 0.28 -0.4 1,378,697 + ABZR86_RS06145 0.28 +0.6 1,378,697 + ABZR86_RS06145 0.28 -0.1 1,378,697 + ABZR86_RS06145 0.28 +0.2 1,378,697 + ABZR86_RS06145 0.28 +0.6 1,378,698 - ABZR86_RS06145 0.28 +0.8 1,378,698 - ABZR86_RS06145 0.28 +0.6 1,378,698 - ABZR86_RS06145 0.28 +0.9 1,378,698 - ABZR86_RS06145 0.28 +0.5 1,378,698 - ABZR86_RS06145 0.28 +1.2 1,378,698 - ABZR86_RS06145 0.28 +0.1 1,378,698 - ABZR86_RS06145 0.28 +0.3 1,378,698 - ABZR86_RS06145 0.28 -0.3 1,378,698 - ABZR86_RS06145 0.28 -0.1 1,378,698 - ABZR86_RS06145 0.28 -0.5 1,378,698 - ABZR86_RS06145 0.28 -0.3 1,378,698 - ABZR86_RS06145 0.28 +0.5 1,378,704 - ABZR86_RS06145 0.29 +0.3 1,378,704 - ABZR86_RS06145 0.29 +0.2 1,378,704 - ABZR86_RS06145 0.29 +1.0 1,378,799 - ABZR86_RS06145 0.38 -0.5 1,378,799 - ABZR86_RS06145 0.38 +0.9 1,378,913 - ABZR86_RS06145 0.49 -0.1 1,378,913 - ABZR86_RS06145 0.49 -0.9 1,378,913 - ABZR86_RS06145 0.49 +0.5 1,378,919 - ABZR86_RS06145 0.50 +0.7 1,378,919 - ABZR86_RS06145 0.50 +1.8 1,378,919 - ABZR86_RS06145 0.50 +0.6 1,378,919 - ABZR86_RS06145 0.50 -0.1 1,379,442 - +0.4 1,379,442 - +0.1 1,379,442 - -0.1 1,379,442 - +0.5 1,379,442 - +0.3 1,379,442 - +0.2 1,379,442 - +0.7 1,379,442 - +0.1 1,379,442 - +0.3 1,379,511 + +0.5 1,379,511 + -1.5 1,379,511 + +0.0 1,379,511 + -0.1 1,379,511 + +0.6 1,379,511 + +0.9 1,379,511 + -1.1 1,379,511 + -0.2 1,379,512 - -0.7 1,379,512 - +0.6 1,379,512 - +0.5 1,379,512 - -0.5 1,379,512 - +0.4 1,379,512 - -0.7 1,379,967 + ABZR86_RS06150 0.65 +0.3 1,379,968 - ABZR86_RS06150 0.65 +0.1 1,379,968 - ABZR86_RS06150 0.65 +0.0 1,379,968 - ABZR86_RS06150 0.65 +0.3 1,380,032 + ABZR86_RS06150 0.73 -1.1 1,380,090 - ABZR86_RS06150 0.80 +0.9 1,380,437 + ABZR86_RS06155 0.13 +0.6 1,380,438 - ABZR86_RS06155 0.13 +0.1 1,380,438 - ABZR86_RS06155 0.13 +0.9 1,380,456 - ABZR86_RS06155 0.15 +0.9 1,380,623 + ABZR86_RS06155 0.27 +0.8 1,380,623 + ABZR86_RS06155 0.27 -2.2 1,380,623 + ABZR86_RS06155 0.27 -0.9 1,380,623 + ABZR86_RS06155 0.27 +0.6 1,380,623 + ABZR86_RS06155 0.27 -0.2 1,380,623 + ABZR86_RS06155 0.27 +0.3 1,380,623 + ABZR86_RS06155 0.27 -0.7 1,380,624 - ABZR86_RS06155 0.27 +0.1 1,380,624 - ABZR86_RS06155 0.27 -1.7 1,380,624 - ABZR86_RS06155 0.27 -0.4 1,380,624 - ABZR86_RS06155 0.27 -0.8 1,380,624 - ABZR86_RS06155 0.27 +0.2 1,380,624 - ABZR86_RS06155 0.27 +0.2 1,380,624 - ABZR86_RS06155 0.27 +0.2 1,380,624 - ABZR86_RS06155 0.27 -0.3 1,380,624 - ABZR86_RS06155 0.27 +0.0 1,380,932 + ABZR86_RS06155 0.50 -0.8 1,381,003 - ABZR86_RS06155 0.55 -0.5
Or see this region's nucleotide sequence