Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS04480

Experiment: Chloramphenicol 0.012 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.012 mg/ml
1,002,776	+		ABZR86_RS04475	0.48	+0.8
1,002,776	+		ABZR86_RS04475	0.48	-1.0
1,002,776	+		ABZR86_RS04475	0.48	-0.8
1,002,777	-		ABZR86_RS04475	0.48	-0.2
1,002,777	-		ABZR86_RS04475	0.48	-0.8
1,002,777	-		ABZR86_RS04475	0.48	-0.2
1,002,790	+		ABZR86_RS04475	0.50	+0.1
1,002,791	-		ABZR86_RS04475	0.50	+1.0
1,002,797	+		ABZR86_RS04475	0.51	+0.0
1,002,798	-		ABZR86_RS04475	0.51	-0.3
1,002,798	-		ABZR86_RS04475	0.51	-1.0
1,002,798	-		ABZR86_RS04475	0.51	-0.1
1,002,844	+		ABZR86_RS04475	0.57	+1.3
1,002,844	+		ABZR86_RS04475	0.57	-0.2
1,002,844	+		ABZR86_RS04475	0.57	-0.2
1,002,844	+		ABZR86_RS04475	0.57	-0.7
1,002,844	+		ABZR86_RS04475	0.57	-0.4
1,002,844	+		ABZR86_RS04475	0.57	+0.2
1,002,844	+		ABZR86_RS04475	0.57	-0.7
1,002,844	+		ABZR86_RS04475	0.57	-0.3
1,002,844	+		ABZR86_RS04475	0.57	+0.3
1,002,844	+		ABZR86_RS04475	0.57	-0.2
1,002,845	-		ABZR86_RS04475	0.57	-0.8
1,002,845	-		ABZR86_RS04475	0.57	+0.4
1,002,845	-		ABZR86_RS04475	0.57	+1.2
1,002,845	-		ABZR86_RS04475	0.57	-0.8
1,002,845	-		ABZR86_RS04475	0.57	-0.1
1,002,845	-		ABZR86_RS04475	0.57	-0.4
1,002,845	-		ABZR86_RS04475	0.57	+0.1
1,002,898	+		ABZR86_RS04475	0.63	+0.1
1,002,898	+		ABZR86_RS04475	0.63	+0.3
1,002,898	+		ABZR86_RS04475	0.63	+0.4
1,002,898	+		ABZR86_RS04475	0.63	+0.5
1,002,898	+		ABZR86_RS04475	0.63	+0.5
1,002,898	+		ABZR86_RS04475	0.63	-2.8
1,002,899	-		ABZR86_RS04475	0.63	+0.9
1,002,899	-		ABZR86_RS04475	0.63	+0.4
1,002,899	-		ABZR86_RS04475	0.63	-0.1
1,002,899	-		ABZR86_RS04475	0.63	+0.2
1,002,899	-		ABZR86_RS04475	0.63	+0.1
1,003,024	+		ABZR86_RS04475	0.79	+0.4
1,003,025	-		ABZR86_RS04475	0.79	-0.2
1,003,027	+		ABZR86_RS04475	0.79	+0.4
1,003,027	+		ABZR86_RS04475	0.79	+0.0
1,003,027	+		ABZR86_RS04475	0.79	-1.5
1,003,027	+		ABZR86_RS04475	0.79	+0.8
1,003,027	+		ABZR86_RS04475	0.79	+0.3
1,003,027	+		ABZR86_RS04475	0.79	+0.1
1,003,028	-		ABZR86_RS04475	0.80	+0.4
1,003,028	-		ABZR86_RS04475	0.80	+0.3
1,003,028	-		ABZR86_RS04475	0.80	+0.8
1,003,028	-		ABZR86_RS04475	0.80	-0.3
1,003,028	-		ABZR86_RS04475	0.80	+0.4
1,003,028	-		ABZR86_RS04475	0.80	-0.1
1,003,028	-		ABZR86_RS04475	0.80	-0.3
1,003,211	+				+0.6
1,003,211	+				-0.1
1,003,212	-				-0.1
1,003,240	+				+0.9
1,003,240	+				-0.3
1,003,240	+				+0.4
1,003,240	+				-0.5
1,003,240	+				-0.0
1,003,240	+				-0.1
1,003,240	+				-0.0
1,003,241	-				-0.7
1,003,241	-				-0.3
1,003,241	-				+0.6
1,003,259	+				-0.2
1,003,259	+				-0.1
1,003,259	+				-0.5
1,003,259	+				-0.1
1,003,259	+				-0.1
1,003,259	+				+0.4
1,003,259	+				+0.5
1,003,259	+				+0.1
1,003,259	+				+2.1
1,003,259	+				-0.2
1,003,260	-				+0.7
1,003,263	+				+0.1
1,003,263	+				+1.2
1,003,264	-				+0.1
1,003,264	-				-0.0
1,003,264	-				-0.2
1,003,324	+				-0.7
1,003,324	+				-1.4
1,003,324	+				-1.9
1,003,325	-				+0.0
1,003,325	-				-0.1
1,003,325	-				+0.4
1,003,326	+				-2.3
1,003,326	+				-1.6
1,003,326	+				-0.8
1,003,326	+				-1.5
1,003,326	+				+0.5
1,003,327	-				-0.1
1,003,327	-				+0.0
1,003,327	-				+0.2
1,003,327	-				+0.2
1,003,327	-				-0.8
1,003,332	+				-0.0
1,003,332	+				+0.7
1,003,333	-				-0.5
1,003,333	-				-0.5
1,003,334	+				+0.5
1,003,334	+				+0.4
1,003,335	-				+1.0
1,003,335	-				+0.7
1,003,335	-				-0.1
1,003,554	+				+0.1
1,003,554	+				+0.4
1,003,554	+				+0.7
1,003,554	+				-0.8
1,003,554	+				-0.1
1,003,555	-				+0.3
1,003,555	-				-0.3
1,003,555	-				-0.6
1,003,555	-				+0.8
1,003,570	+				-0.6
1,003,570	+				+0.3
1,003,571	-				+0.1
1,003,571	-				+0.4
1,003,776	+				-0.4
1,003,776	+				+0.3
1,003,776	+				-0.1
1,003,776	+				+0.4
1,003,777	-				+0.3
1,003,777	-				-0.9
1,003,783	-				+0.5
1,003,783	-				+0.4
1,003,783	-				-0.1
1,003,783	-				+0.1
1,003,856	+				-1.9
1,003,920	+				-0.1
1,003,920	+				-0.2
1,003,920	+				-0.3
1,003,920	+				-1.2
1,003,920	+				-0.0
1,003,920	+				-0.0
1,003,920	+				+0.1
1,003,920	+				+1.1
1,003,920	+				-0.1
1,003,920	+				+0.5
1,003,920	+				+0.5
1,003,920	+				+0.7
1,003,921	-				+0.2
1,003,921	-				+0.7
1,003,921	-				+0.3
1,003,921	-				-0.3
1,003,921	-				-0.6
1,003,921	-				+0.0
1,003,934	+				+1.2
1,003,934	+				+0.0
1,003,935	-				-1.0
1,004,006	+		ABZR86_RS04480	0.13	+0.5
1,004,006	+		ABZR86_RS04480	0.13	+0.1
1,004,006	+		ABZR86_RS04480	0.13	+0.7
1,004,006	+		ABZR86_RS04480	0.13	+0.2
1,004,006	+		ABZR86_RS04480	0.13	+0.2
1,004,006	+		ABZR86_RS04480	0.13	-1.6
1,004,006	+		ABZR86_RS04480	0.13	+0.1
1,004,007	-		ABZR86_RS04480	0.13	+0.9
1,004,007	-		ABZR86_RS04480	0.13	-0.2
1,004,007	-		ABZR86_RS04480	0.13	+0.7
1,004,007	-		ABZR86_RS04480	0.13	-0.3
1,004,076	+		ABZR86_RS04480	0.17	+0.3
1,004,077	-		ABZR86_RS04480	0.17	-0.4
1,004,077	-		ABZR86_RS04480	0.17	+0.3
1,004,077	-		ABZR86_RS04480	0.17	+0.8
1,004,077	-		ABZR86_RS04480	0.17	+1.4
1,004,177	+		ABZR86_RS04480	0.22	+0.2
1,004,177	+		ABZR86_RS04480	0.22	+0.0
1,004,178	-		ABZR86_RS04480	0.22	-0.3
1,004,202	-		ABZR86_RS04480	0.23	-0.2
1,004,202	-		ABZR86_RS04480	0.23	+0.1
1,004,231	+		ABZR86_RS04480	0.25	+0.0
1,004,231	+		ABZR86_RS04480	0.25	+0.3
1,004,231	+		ABZR86_RS04480	0.25	-0.4
1,004,231	+		ABZR86_RS04480	0.25	+0.2
1,004,231	+		ABZR86_RS04480	0.25	-0.3
1,004,231	+		ABZR86_RS04480	0.25	+0.4
1,004,232	-		ABZR86_RS04480	0.25	-0.4
1,004,232	-		ABZR86_RS04480	0.25	+1.1
1,004,232	-		ABZR86_RS04480	0.25	+0.5
1,004,232	-		ABZR86_RS04480	0.25	+0.7
1,004,232	-		ABZR86_RS04480	0.25	+0.5
1,004,252	-		ABZR86_RS04480	0.26	-0.1
1,004,297	+		ABZR86_RS04480	0.28	-0.5
1,004,297	+		ABZR86_RS04480	0.28	-0.1
1,004,297	+		ABZR86_RS04480	0.28	+0.5
1,004,297	+		ABZR86_RS04480	0.28	+0.7
1,004,297	+		ABZR86_RS04480	0.28	+0.5
1,004,297	+		ABZR86_RS04480	0.28	+0.7
1,004,298	-		ABZR86_RS04480	0.28	+0.2
1,004,298	-		ABZR86_RS04480	0.28	+0.2
1,004,498	+		ABZR86_RS04480	0.39	-0.4
1,004,498	+		ABZR86_RS04480	0.39	-0.8
1,004,498	+		ABZR86_RS04480	0.39	+0.9
1,004,498	+		ABZR86_RS04480	0.39	+0.8
1,004,498	+		ABZR86_RS04480	0.39	-1.0
1,004,499	-		ABZR86_RS04480	0.39	-0.0
1,004,499	-		ABZR86_RS04480	0.39	-0.4
1,004,499	-		ABZR86_RS04480	0.39	-0.5
1,004,499	-		ABZR86_RS04480	0.39	-0.5
1,004,499	-		ABZR86_RS04480	0.39	+0.3
1,004,738	-		ABZR86_RS04480	0.51	-1.2
1,004,907	+		ABZR86_RS04480	0.60	-0.2
1,004,907	+		ABZR86_RS04480	0.60	-0.7
1,004,907	+		ABZR86_RS04480	0.60	+0.1
1,004,908	-		ABZR86_RS04480	0.60	+0.1
1,004,908	-		ABZR86_RS04480	0.60	-0.3
1,005,377	+		ABZR86_RS04480	0.85	-0.4
1,005,377	+		ABZR86_RS04480	0.85	+0.7
1,005,377	+		ABZR86_RS04480	0.85	-0.5
1,005,547	-				+0.1
1,005,551	+				+0.6
1,005,552	-				+0.8
1,005,552	-				+0.4
1,005,552	-				+0.3
1,005,552	-				+0.8
1,005,588	-				-0.2
1,005,638	+				+1.7
1,005,638	+				+0.3
1,005,638	+				+0.5
1,005,638	+				-0.4
1,005,638	+				+0.1
1,005,638	+				-1.0
1,005,639	-				+0.7
1,005,665	+				+0.2
1,005,665	+				+0.5
1,005,665	+				+0.1
1,005,665	+				+0.1
1,005,666	-				-0.5
1,005,666	-				+0.8
1,005,793	+				-0.3
1,005,895	+				-0.0
1,005,895	+				-0.4
1,005,929	+				+0.9
1,006,037	+		ABZR86_RS04485	0.14	-0.0
1,006,038	-		ABZR86_RS04485	0.14	+0.5
1,006,090	+		ABZR86_RS04485	0.17	+0.5
1,006,090	+		ABZR86_RS04485	0.17	+0.0
1,006,090	+		ABZR86_RS04485	0.17	-0.6
1,006,090	+		ABZR86_RS04485	0.17	+0.1
1,006,090	+		ABZR86_RS04485	0.17	-0.8
1,006,091	-		ABZR86_RS04485	0.17	-0.2
1,006,091	-		ABZR86_RS04485	0.17	-0.3
1,006,091	-		ABZR86_RS04485	0.17	+1.2
1,006,091	-		ABZR86_RS04485	0.17	+0.1
1,006,091	-		ABZR86_RS04485	0.17	-0.2
1,006,091	-		ABZR86_RS04485	0.17	-0.2
1,006,091	-		ABZR86_RS04485	0.17	-1.0
1,006,091	-		ABZR86_RS04485	0.17	+0.0
1,006,091	-		ABZR86_RS04485	0.17	-0.1
1,006,205	+		ABZR86_RS04485	0.23	-0.2
1,006,206	-		ABZR86_RS04485	0.23	-0.3
1,006,206	-		ABZR86_RS04485	0.23	+0.0
1,006,206	-		ABZR86_RS04485	0.23	+0.3
1,006,250	+		ABZR86_RS04485	0.25	-1.1
1,006,251	-		ABZR86_RS04485	0.25	+0.1
1,006,349	-		ABZR86_RS04485	0.30	-1.0
1,006,349	-		ABZR86_RS04485	0.30	+0.2
1,006,403	+		ABZR86_RS04485	0.32	+0.3
1,006,403	+		ABZR86_RS04485	0.32	+0.5
1,006,404	-		ABZR86_RS04485	0.32	+0.5
1,006,414	+		ABZR86_RS04485	0.33	-0.1
1,006,415	-		ABZR86_RS04485	0.33	+0.0
1,006,415	-		ABZR86_RS04485	0.33	+0.9
1,006,606	+		ABZR86_RS04485	0.42	-0.2
1,006,606	+		ABZR86_RS04485	0.42	+1.0
1,006,606	+		ABZR86_RS04485	0.42	+0.6
1,006,607	-		ABZR86_RS04485	0.43	+0.2
1,006,607	-		ABZR86_RS04485	0.43	-0.5
1,006,607	-		ABZR86_RS04485	0.43	-0.4
1,006,607	-		ABZR86_RS04485	0.43	-0.4